RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 A8MZ25 164 aa8.09□□□□□ -1.11
RNF43-203ENST00000577716 IGHV3-30P01768 117 aa8.09□□□□□ -1.11
RNF43-203ENST00000577716 CRYGDP07320 174 aa8.09□□□□□ -1.11
RNF43-203ENST00000577716 SPART-AS1P0CW21 52 aa8.09□□□□□ -1.11
RNF43-203ENST00000577716 IGHV3-30-5P0DP03 117 aa8.09□□□□□ -1.11
RNF43-203ENST00000577716 RBMY1FQ15415 496 aaKnown RBP8.09□□□□□ -1.11
RNF43-203ENST00000577716 PSMB8P28062 276 aa8.09□□□□□ -1.11
RNF43-203ENST00000577716 ATOX1O00244 68 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 DEFB135Q30KP9 77 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 Q6YL49 198 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 TSHBP01222 138 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 HIST2H2BDQ6DRA6 164 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 INSL3P51460 131 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 C1orf43Q9BWL3 253 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 SPANXCQ9NY87 97 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 PRO0255Q9UI72 69 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
RNF43-203ENST00000577716 UFSP1Q6NVU6 142 aa8.07□□□□□ -1.12
RNF43-203ENST00000577716 LINC00643Q86TS7 51 aa8.07□□□□□ -1.12
RNF43-203ENST00000577716 TRBV30A0A0K0K1B3 111 aa8.07□□□□□ -1.12
RNF43-203ENST00000577716 DNAJC9-AS1A6NH13 148 aa8.07□□□□□ -1.12
RNF43-203ENST00000577716 DCANP1Q8TF63 244 aa8.07□□□□□ -1.12
RNF43-203ENST00000577716 PRM2P04554 102 aa8.07□□□□□ -1.12
RNF43-203ENST00000577716 SPAG11BQ08648 103 aa8.07□□□□□ -1.12
RNF43-203ENST00000577716 JMJD7-PLA2G4BH0Y9G9 81 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 CITED1Q99966 193 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 MRGPRG-AS1Q2M3A8 158 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 PIK3CD-AS1Q5SR53 167 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 COX8CQ7Z4L0 72 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 C14orf132Q9NPU4 83 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 C9orf85Q96MD7 179 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 NDUFV3P56181 108 aaKnown RBP8.06□□□□□ -1.12
RNF43-203ENST00000577716 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 PRORYQ9H606 182 aa8.06□□□□□ -1.12
RNF43-203ENST00000577716 PTPRBP23467 1997 aa8.05□□□□□ -1.12
RNF43-203ENST00000577716 IGIPA6NJ69 53 aa8.05□□□□□ -1.12
RNF43-203ENST00000577716 NCR3O14931 201 aa8.05□□□□□ -1.12
RNF43-203ENST00000577716 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
RNF43-203ENST00000577716 IGHV4-31P0DP07 118 aa8.05□□□□□ -1.12
RNF43-203ENST00000577716 TIRAPP58753 221 aa8.05□□□□□ -1.12
RNF43-203ENST00000577716 ACANP16112 2415 aa8.05□□□□□ -1.12
RNF43-203ENST00000577716 CXCL5P42830 114 aa8.05□□□□□ -1.12
RNF43-203ENST00000577716 RAI1Q7Z5J4 1906 aaPredicted RBP8.05□□□□□ -1.12
RNF43-203ENST00000577716 NDUFA1O15239 70 aa8.04□□□□□ -1.12
RNF43-203ENST00000577716 SZT2Q5T011 3432 aa8.04□□□□□ -1.12
RNF43-203ENST00000577716 PSMG3-AS1Q96PY0 264 aa8.04□□□□□ -1.12
RNF43-203ENST00000577716 WDFY4Q6ZS81 3184 aa8.03□□□□□ -1.12
RNF43-203ENST00000577716 A0A1W2PPR1 153 aa8.03□□□□□ -1.12
RNF43-203ENST00000577716 FASNP49327 2511 aaKnown RBP8.03□□□□□ -1.12
RNF43-203ENST00000577716 EDN2P20800 178 aa8.03□□□□□ -1.12
RNF43-203ENST00000577716 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
RNF43-203ENST00000577716 Q6ZSV7 163 aa8.03□□□□□ -1.12
RNF43-203ENST00000577716 hADV29S1A0JD25 119 aa8.02□□□□□ -1.13
RNF43-203ENST00000577716 AVPP01185 164 aa8.02□□□□□ -1.13
RNF43-203ENST00000577716 RMI2Q96E14 147 aa8.02□□□□□ -1.13
RNF43-203ENST00000577716 ZNF462Q96JM2 2506 aa8.02□□□□□ -1.13
RNF43-203ENST00000577716 TMEM256-PLSCR3K7ERE1 68 aa8.02□□□□□ -1.13
RNF43-203ENST00000577716 XGP55808 180 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 SPATA25Q9BR10 227 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 CDK2AP2O75956 126 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 LINC00269Q8N2A0 174 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 ZNF702PQ9H963 129 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 UBE2D1P51668 147 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 C18orf65Q6ZTR6 163 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 WFDC11Q8NEX6 87 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 IGLV2-18A0A075B6J9 118 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 ETDCA0A1B0GVM5 59 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 UBE2D4Q9Y2X8 147 aa8.01□□□□□ -1.13
RNF43-203ENST00000577716 VPS13AQ96RL7 3174 aa8□□□□□ -1.13
RNF43-203ENST00000577716 RPL18AQ02543 176 aaKnown RBP8□□□□□ -1.13
RNF43-203ENST00000577716 FAM222AQ5U5X8 452 aa8□□□□□ -1.13
RNF43-203ENST00000577716 DIRC1Q969H9 104 aa8□□□□□ -1.13
RNF43-203ENST00000577716 EPG5Q9HCE0 2579 aa8□□□□□ -1.13
RNF43-203ENST00000577716 TRBV6-8A0A0A6YYG3 113 aa8□□□□□ -1.13
RNF43-203ENST00000577716 TIMM17BO60830 172 aa8□□□□□ -1.13
RNF43-203ENST00000577716 FUSP35637 526 aaKnown RBP eCLIP8□□□□□ -1.13
RNF43-203ENST00000577716 IBA57-AS1B1ANH7 110 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
RNF43-203ENST00000577716 POM121L12Q8N7R1 296 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 LST1O00453 97 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 PCSK5Q92824 1860 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 UBE2BP63146 152 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 LAMA1P25391 3075 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 IGLV4-69A0A075B6H9 119 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 IGHV4-28A0A0C4DH34 117 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 TRBV6-4A0A1B0GX49 114 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 SLPIP03973 132 aa7.99□□□□□ -1.13
RNF43-203ENST00000577716 TSPEAR-AS2P59090 65 aa7.98□□□□□ -1.13
RNF43-203ENST00000577716 REG3AQ06141 175 aa7.98□□□□□ -1.13
RNF43-203ENST00000577716 NREPQ16612 68 aa7.98□□□□□ -1.13
RNF43-203ENST00000577716 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
RNF43-203ENST00000577716 CRIP2P52943 208 aaPredicted RBP7.97□□□□□ -1.13
RNF43-203ENST00000577716 LRRC75A-AS1Q8N1F1 130 aa7.97□□□□□ -1.13
RNF43-203ENST00000577716 MRAPQ8TCY5 172 aa7.97□□□□□ -1.13
RNF43-203ENST00000577716 CHCHD10Q8WYQ3 142 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms