RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 KHDC1LQ5JSQ8 128 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 SUMO4Q6EEV6 95 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 SMAD5-AS1Q9Y6J3 95 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 ARFGEF3Q5TH69 2177 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 A0A1W2PNU3 283 aaPredicted RBP5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 CCL4P13236 92 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 GAFA1Q96PS6 74 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 ZNF580Q9UK33 172 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 DMXL2Q8TDJ6 3036 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 ZGRF1Q86YA3 2104 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 IGLV5-45A0A087WSX0 123 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 hDV103S1A0JD37 113 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 PRAC2D3DTV9 90 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 UBE2AP49459 152 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 UNQ9165/PRO28630Q6UXU0 137 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 MIR7-3HGQ8N6C7 128 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 Q8N6K4 173 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 LINC01560Q8TB33 94 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 LAMA5O15230 3695 aa5.73□□□□□ -1.49
TOM1L1-220ENST00000575333 SVILO95425 2214 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 ZFHX4Q86UP3 3567 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 TMEM256-PLSCR3K7ERE1 68 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 NCR3O14931 201 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 NDPQ00604 133 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 NREPQ16612 68 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 Q6ZTC4 211 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 LINC00167Q96N53 147 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 CHD8Q9HCK8 2581 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 CFAP47Q6ZTR5 3102 aa5.72□□□□□ -1.49
TOM1L1-220ENST00000575333 IGKV3-15P01624 115 aa5.71□□□□□ -1.49
TOM1L1-220ENST00000575333 RFPL3SP0C7P2 107 aa5.71□□□□□ -1.49
TOM1L1-220ENST00000575333 WFDC9Q8NEX5 89 aa5.71□□□□□ -1.49
TOM1L1-220ENST00000575333 DOCK10Q96BY6 2186 aa5.71□□□□□ -1.49
TOM1L1-220ENST00000575333 MALRD1Q5VYJ5 2156 aa5.71□□□□□ -1.5
TOM1L1-220ENST00000575333 C8orf87E5RJ46 101 aa5.71□□□□□ -1.5
TOM1L1-220ENST00000575333 PRB4P10163 310 aaPredicted RBP5.71□□□□□ -1.5
TOM1L1-220ENST00000575333 PDE6GP18545 87 aa5.71□□□□□ -1.5
TOM1L1-220ENST00000575333 ATP11AUNQ6ZP68 121 aa5.71□□□□□ -1.5
TOM1L1-220ENST00000575333 A0A087WYN8 130 aa5.7□□□□□ -1.5
TOM1L1-220ENST00000575333 IGHV1-3A0A0C4DH29 117 aa5.7□□□□□ -1.5
TOM1L1-220ENST00000575333 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
TOM1L1-220ENST00000575333 C9orf129Q5T035 196 aaKnown RBP5.7□□□□□ -1.5
TOM1L1-220ENST00000575333 Q6ZRP5 223 aa5.7□□□□□ -1.5
TOM1L1-220ENST00000575333 ZNRD1Q9P1U0 126 aa5.7□□□□□ -1.5
TOM1L1-220ENST00000575333 IGF2RP11717 2491 aa5.7□□□□□ -1.5
TOM1L1-220ENST00000575333 ZZEF1O43149 2961 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 A0A087WZ39 114 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 SPRY3O43610 288 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 LINC01547P58512 204 aaPredicted RBP5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 ECSCRQ19T08 205 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 IGFL4Q6B9Z1 124 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 LCA10Q71F78 164 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 SDK2Q58EX2 2172 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 IGLV11-55A0A075B6I3 123 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 LOC110117498A0A087WWA1 95 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 F5H697 171 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 LECT2O14960 151 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 RNASE3P12724 160 aaKnown RBP5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 Q9H8V8 135 aa5.69□□□□□ -1.5
TOM1L1-220ENST00000575333 IGKV2-29A2NJV5 120 aaPredicted RBP5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 H3BQ85 93 aa5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 APELAP0DMC3 54 aa5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 CLEC19AQ6UXS0 136 aa5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 ZFAND2AQ8N6M9 145 aa5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 APC2O95996 2303 aa5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 CNTRLQ7Z7A1 2325 aa5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 ANKRD11Q6UB99 2663 aaPredicted RBP5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 PRR14LQ5THK1 2151 aa5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 DSPP15924 2871 aaKnown RBP5.68□□□□□ -1.5
TOM1L1-220ENST00000575333 AHCTF1Q8WYP5 2266 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 TRAV22A0A0B4J277 110 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 K7EMT4 169 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 M0QY20 66 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 SYCNQ0VAF6 134 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 ACACAQ13085 2346 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 ACACBO00763 2458 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 LOC400499M0QZD8 3231 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 PLXNB1O43157 2135 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 IGLV1-44P01699 117 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 SMIM11BQ8TCY0 68 aa5.67□□□□□ -1.5
TOM1L1-220ENST00000575333 IGHV1-2P23083 117 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 PRR9Q5T870 116 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 FAM19A3Q7Z5A8 133 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 LINC00269Q8N2A0 174 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 DIRC1Q969H9 104 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 CYP4F30PQ9H0H9 118 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 ARHGAP32A7KAX9 2087 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 TPRP12270 2363 aaKnown RBP5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 NBEAQ8NFP9 2946 aa5.66□□□□□ -1.5
TOM1L1-220ENST00000575333 URB1O60287 2271 aaKnown RBP5.65□□□□□ -1.5
TOM1L1-220ENST00000575333 BPY2O14599 106 aa5.65□□□□□ -1.5
TOM1L1-220ENST00000575333 C11orf72Q8NBR9 251 aa5.65□□□□□ -1.5
TOM1L1-220ENST00000575333 ESM1Q9NQ30 184 aa5.65□□□□□ -1.5
TOM1L1-220ENST00000575333 MAP1BP46821 2468 aaKnown RBP5.65□□□□□ -1.5
TOM1L1-220ENST00000575333 PLA2G1BP04054 148 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms