RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 LGALS3P17931 250 aaKnown RBP13.32□□□□□ -0.28
SPNS3-204ENST00000575194 KIR2DL5BQ8NHK3 375 aa13.32□□□□□ -0.28
SPNS3-204ENST00000575194 SMIM13P0DJ93 91 aa13.31□□□□□ -0.28
SPNS3-204ENST00000575194 APOC4P55056 127 aa13.31□□□□□ -0.28
SPNS3-204ENST00000575194 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
SPNS3-204ENST00000575194 NOTCH1P46531 2555 aa13.31□□□□□ -0.28
SPNS3-204ENST00000575194 GAGE12JA6NER3 117 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 C9orf118A6NHY6 69 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 J3QQQ9 107 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 FXYD2P54710 66 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 GAGE4Q13068 117 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 GAGE5Q13069 117 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 UBE2V1Q13404 147 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 GAGE13Q4V321 117 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 DGAT2L7PQ6IED9 249 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 FAM104AQ969W3 186 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 TINCRA0A1B0GVN0 87 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
SPNS3-204ENST00000575194 Q6ZUT4 128 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 GTSF1LQ9H1H1 148 aa13.3□□□□□ -0.28
SPNS3-204ENST00000575194 OXLD1Q5BKU9 147 aa13.27□□□□□ -0.28
SPNS3-204ENST00000575194 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.28
SPNS3-204ENST00000575194 CSDC2Q9Y534 153 aaKnown RBP13.27□□□□□ -0.28
SPNS3-204ENST00000575194 TSPEAR-AS2P59090 65 aa13.27□□□□□ -0.29
SPNS3-204ENST00000575194 TMEM238LA0A1B0GVL6 79 aa13.26□□□□□ -0.29
SPNS3-204ENST00000575194 A6NJY4 79 aa13.26□□□□□ -0.29
SPNS3-204ENST00000575194 FHL2Q14192 279 aa13.26□□□□□ -0.29
SPNS3-204ENST00000575194 TMEM243Q9BU79 118 aa13.26□□□□□ -0.29
SPNS3-204ENST00000575194 X6R8D5 127 aa13.26□□□□□ -0.29
SPNS3-204ENST00000575194 H7C423 109 aa13.25□□□□□ -0.29
SPNS3-204ENST00000575194 RNASE13Q5GAN3 156 aaKnown RBP13.25□□□□□ -0.29
SPNS3-204ENST00000575194 SBSPONQ8IVN8 264 aa13.25□□□□□ -0.29
SPNS3-204ENST00000575194 GEMIN7Q9H840 131 aaKnown RBP13.25□□□□□ -0.29
SPNS3-204ENST00000575194 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
SPNS3-204ENST00000575194 NHP2Q9NX24 153 aaKnown RBP13.25□□□□□ -0.29
SPNS3-204ENST00000575194 UBE2L6O14933 153 aa13.25□□□□□ -0.29
SPNS3-204ENST00000575194 UBE2D1P51668 147 aa13.25□□□□□ -0.29
SPNS3-204ENST00000575194 SRSF9Q13242 221 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPNS3-204ENST00000575194 A0A0J9YY99 117 aa13.24□□□□□ -0.29
SPNS3-204ENST00000575194 AMMECR1LQ6DCA0 310 aa13.24□□□□□ -0.29
SPNS3-204ENST00000575194 NTM-AS1Q6ZSK4 140 aa13.24□□□□□ -0.29
SPNS3-204ENST00000575194 RAB37Q96AX2 223 aa13.24□□□□□ -0.29
SPNS3-204ENST00000575194 LYRM9A8MSI8 78 aa13.23□□□□□ -0.29
SPNS3-204ENST00000575194 CCL25O15444 150 aa13.23□□□□□ -0.29
SPNS3-204ENST00000575194 TIRAPP58753 221 aa13.23□□□□□ -0.29
SPNS3-204ENST00000575194 TMEM101Q96IK0 257 aa13.23□□□□□ -0.29
SPNS3-204ENST00000575194 DNAH3Q8TD57 4116 aa13.23□□□□□ -0.29
SPNS3-204ENST00000575194 H3BUT2 72 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 K7EP13 123 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 DEFB130BP0DP73 79 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 DEFB130AP0DP74 79 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 EGFEM1PQ0D2K5 195 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 GTF2H5Q6ZYL4 71 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 OR5A1Q8NGJ0 315 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 IGHV1-58A0A0C4DH39 117 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 LINC00694P0DN24 101 aa13.22□□□□□ -0.29
SPNS3-204ENST00000575194 G3V4G9 280 aa13.21□□□□□ -0.3
SPNS3-204ENST00000575194 SAMD5Q5TGI4 173 aa13.21□□□□□ -0.3
SPNS3-204ENST00000575194 FAM19A3Q7Z5A8 133 aa13.21□□□□□ -0.3
SPNS3-204ENST00000575194 IGLV5-45A0A087WSX0 123 aa13.2□□□□□ -0.3
SPNS3-204ENST00000575194 LOC100131303A0A0U1RQF7 123 aa13.2□□□□□ -0.3
SPNS3-204ENST00000575194 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
SPNS3-204ENST00000575194 IGHV3-30-3P0DP02 117 aa13.2□□□□□ -0.3
SPNS3-204ENST00000575194 HERVK_113P63121 156 aa13.2□□□□□ -0.3
SPNS3-204ENST00000575194 C12orf74Q32Q52 190 aa13.2□□□□□ -0.3
SPNS3-204ENST00000575194 IGHV3-64A0A075B6Q5 118 aa13.19□□□□□ -0.3
SPNS3-204ENST00000575194 A0A1W2PPM0 123 aa13.19□□□□□ -0.3
SPNS3-204ENST00000575194 K7ERJ3 54 aa13.19□□□□□ -0.3
SPNS3-204ENST00000575194 KRTAP10-11P60412 298 aa13.19□□□□□ -0.3
SPNS3-204ENST00000575194 DEFB135Q30KP9 77 aa13.19□□□□□ -0.3
SPNS3-204ENST00000575194 FABP2P12104 132 aa13.19□□□□□ -0.3
SPNS3-204ENST00000575194 VSIG2Q96IQ7 327 aa13.19□□□□□ -0.3
SPNS3-204ENST00000575194 GAGE10A6NGK3 116 aa13.18□□□□□ -0.3
SPNS3-204ENST00000575194 TMEM238C9JI98 176 aa13.17□□□□□ -0.3
SPNS3-204ENST00000575194 MIFP14174 115 aa13.17□□□□□ -0.3
SPNS3-204ENST00000575194 CDC42SE2Q9NRR3 84 aa13.17□□□□□ -0.3
SPNS3-204ENST00000575194 TRBV6-8A0A0A6YYG3 113 aa13.16□□□□□ -0.3
SPNS3-204ENST00000575194 K7EP34 96 aa13.16□□□□□ -0.3
SPNS3-204ENST00000575194 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
SPNS3-204ENST00000575194 PRO0255Q9UI72 69 aa13.16□□□□□ -0.3
SPNS3-204ENST00000575194 SPINK8P0C7L1 97 aa13.15□□□□□ -0.3
SPNS3-204ENST00000575194 TRAV8-3A0A0A6YYJ7 113 aa13.14□□□□□ -0.31
SPNS3-204ENST00000575194 IGHV3-30P01768 117 aa13.14□□□□□ -0.31
SPNS3-204ENST00000575194 IGHV3-30-5P0DP03 117 aa13.14□□□□□ -0.31
SPNS3-204ENST00000575194 IGHV4-30-4P0DP06 118 aa13.14□□□□□ -0.31
SPNS3-204ENST00000575194 LINC00242Q5T6M2 205 aa13.14□□□□□ -0.31
SPNS3-204ENST00000575194 NAA38Q9BRA0 125 aaKnown RBP13.14□□□□□ -0.31
SPNS3-204ENST00000575194 CDKN2A-AS1Q9UH64 79 aa13.14□□□□□ -0.31
SPNS3-204ENST00000575194 IGHV4-28A0A0C4DH34 117 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 IGLL5B9A064 214 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 GYPEP15421 78 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 KPRPQ5T749 579 aaPredicted RBP13.13□□□□□ -0.31
SPNS3-204ENST00000575194 NDUFA12Q9UI09 145 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 SPCS1Q9Y6A9 102 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 A0A0J9YXY3 114 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 ZFAND6Q6FIF0 208 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 ATP6V0E2Q8NHE4 81 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 RNF183Q96D59 192 aa13.13□□□□□ -0.31
SPNS3-204ENST00000575194 TRAV13-1A0A0B4J241 112 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms