RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 Q6ZUT4 128 aa14.37□□□□□ -0.11
CHRNE-202ENST00000572438 NFE4Q86UQ8 179 aa14.37□□□□□ -0.11
CHRNE-202ENST00000572438 TRBV6-8A0A0A6YYG3 113 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 F5H768 121 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 CTAG1AP78358 180 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 C12orf74Q32Q52 190 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 CSDC2Q9Y534 153 aaKnown RBP14.36□□□□□ -0.11
CHRNE-202ENST00000572438 A0A0J9YY99 117 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 H7C423 109 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 UBE2L6O14933 153 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 RNASE13Q5GAN3 156 aaKnown RBP14.36□□□□□ -0.11
CHRNE-202ENST00000572438 BOD1L2Q8IYS8 172 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 MRPS16Q9Y3D3 137 aaKnown RBP14.36□□□□□ -0.11
CHRNE-202ENST00000572438 NBEAL1Q6ZS30 2694 aa14.36□□□□□ -0.11
CHRNE-202ENST00000572438 CHAC1Q9BUX1 264 aa14.35□□□□□ -0.11
CHRNE-202ENST00000572438 TRAV26-1A0A087WT03 109 aa14.34□□□□□ -0.11
CHRNE-202ENST00000572438 HTN3P15516 51 aa14.34□□□□□ -0.11
CHRNE-202ENST00000572438 PCP2Q8IVA1 136 aa14.34□□□□□ -0.11
CHRNE-202ENST00000572438 C2orf88Q9BSF0 95 aa14.34□□□□□ -0.11
CHRNE-202ENST00000572438 MGAM2Q2M2H8 2515 aa14.34□□□□□ -0.11
CHRNE-202ENST00000572438 A0A0J9YXV3 536 aa14.34□□□□□ -0.11
CHRNE-202ENST00000572438 DLEU1O43261 78 aa14.34□□□□□ -0.11
CHRNE-202ENST00000572438 DEFB121Q5J5C9 76 aa14.33□□□□□ -0.12
CHRNE-202ENST00000572438 AMMECR1LQ6DCA0 310 aa14.33□□□□□ -0.12
CHRNE-202ENST00000572438 SPATA25Q9BR10 227 aa14.33□□□□□ -0.12
CHRNE-202ENST00000572438 OR5A1Q8NGJ0 315 aa14.32□□□□□ -0.12
CHRNE-202ENST00000572438 TMEM170BQ5T4T1 132 aa14.31□□□□□ -0.12
CHRNE-202ENST00000572438 A0A0J9YWU9 116 aa14.31□□□□□ -0.12
CHRNE-202ENST00000572438 E9PLD3 99 aa14.31□□□□□ -0.12
CHRNE-202ENST00000572438 M0R143 59 aa14.31□□□□□ -0.12
CHRNE-202ENST00000572438 TMEM101Q96IK0 257 aa14.31□□□□□ -0.12
CHRNE-202ENST00000572438 HERVK_113P61574 105 aa14.3□□□□□ -0.12
CHRNE-202ENST00000572438 TM2D3Q9BRN9 247 aa14.3□□□□□ -0.12
CHRNE-202ENST00000572438 CHCHD5Q9BSY4 110 aa14.3□□□□□ -0.12
CHRNE-202ENST00000572438 SNHG12Q9BXW3 62 aa14.3□□□□□ -0.12
CHRNE-202ENST00000572438 CDC42SE2Q9NRR3 84 aa14.3□□□□□ -0.12
CHRNE-202ENST00000572438 A0A096LPF7 62 aa14.29□□□□□ -0.12
CHRNE-202ENST00000572438 ZNF25P17030 456 aaPredicted RBP14.29□□□□□ -0.12
CHRNE-202ENST00000572438 GAGE6Q13070 117 aa14.29□□□□□ -0.12
CHRNE-202ENST00000572438 C2orf91Q6ZV80 131 aa14.29□□□□□ -0.12
CHRNE-202ENST00000572438 TTTY13Q9BZ97 58 aa14.29□□□□□ -0.12
CHRNE-202ENST00000572438 EREGO14944 169 aa14.29□□□□□ -0.12
CHRNE-202ENST00000572438 ZNF22P17026 224 aaPredicted RBP14.29□□□□□ -0.12
CHRNE-202ENST00000572438 UBE2D1P51668 147 aa14.29□□□□□ -0.12
CHRNE-202ENST00000572438 TRAV8-6A0A0B4J262 113 aa14.28□□□□□ -0.12
CHRNE-202ENST00000572438 TINCRA0A1B0GVN0 87 aa14.28□□□□□ -0.12
CHRNE-202ENST00000572438 MRPL23Q16540 153 aaKnown RBP14.28□□□□□ -0.12
CHRNE-202ENST00000572438 SIVA1O15304 175 aa14.27□□□□□ -0.12
CHRNE-202ENST00000572438 MRAPQ8TCY5 172 aa14.27□□□□□ -0.12
CHRNE-202ENST00000572438 ICOSQ9Y6W8 199 aa14.27□□□□□ -0.12
CHRNE-202ENST00000572438 Q6ZTC4 211 aa14.27□□□□□ -0.13
CHRNE-202ENST00000572438 SH2D6Q7Z4S9 175 aa14.27□□□□□ -0.13
CHRNE-202ENST00000572438 TMEM223A0PJW6 202 aa14.26□□□□□ -0.13
CHRNE-202ENST00000572438 MAPKAPK5-AS1Q8N8E1 139 aa14.25□□□□□ -0.13
CHRNE-202ENST00000572438 C11orf45Q8TAV5 145 aa14.25□□□□□ -0.13
CHRNE-202ENST00000572438 TENM3Q9P273 2699 aa14.24□□□□□ -0.13
CHRNE-202ENST00000572438 TIRAPP58753 221 aa14.23□□□□□ -0.13
CHRNE-202ENST00000572438 LBHQ53QV2 105 aaPredicted RBP14.23□□□□□ -0.13
CHRNE-202ENST00000572438 FAM19A3Q7Z5A8 133 aa14.23□□□□□ -0.13
CHRNE-202ENST00000572438 GEMIN7Q9H840 131 aaKnown RBP14.23□□□□□ -0.13
CHRNE-202ENST00000572438 H3BNG1 76 aa14.22□□□□□ -0.13
CHRNE-202ENST00000572438 NANOS2P60321 138 aaKnown RBP14.22□□□□□ -0.13
CHRNE-202ENST00000572438 IGLV4-60A0A075B6I1 120 aa14.22□□□□□ -0.13
CHRNE-202ENST00000572438 TRAV13-1A0A0B4J241 112 aa14.22□□□□□ -0.13
CHRNE-202ENST00000572438 MYMXA0A1B0GTQ4 84 aa14.22□□□□□ -0.13
CHRNE-202ENST00000572438 HINT1P49773 126 aaPredicted RBP14.22□□□□□ -0.13
CHRNE-202ENST00000572438 SEC11AP67812 179 aa14.22□□□□□ -0.13
CHRNE-202ENST00000572438 BATFQ16520 125 aa14.22□□□□□ -0.13
CHRNE-202ENST00000572438 LINC00242Q5T6M2 205 aa14.22□□□□□ -0.13
CHRNE-202ENST00000572438 MPV17L2Q567V2 206 aa14.21□□□□□ -0.13
CHRNE-202ENST00000572438 LINC00469Q8N7U9 141 aa14.21□□□□□ -0.13
CHRNE-202ENST00000572438 HIGD1BQ9P298 99 aa14.21□□□□□ -0.13
CHRNE-202ENST00000572438 IGLV5-45A0A087WSX0 123 aa14.2□□□□□ -0.14
CHRNE-202ENST00000572438 TMEM262E9PQX1 116 aa14.2□□□□□ -0.14
CHRNE-202ENST00000572438 HERVK_113P63121 156 aa14.2□□□□□ -0.14
CHRNE-202ENST00000572438 A0A1B0GUV1 79 aa14.2□□□□□ -0.14
CHRNE-202ENST00000572438 LEPROTO15243 131 aa14.2□□□□□ -0.14
CHRNE-202ENST00000572438 J3QQQ9 107 aa14.19□□□□□ -0.14
CHRNE-202ENST00000572438 TSPEAR-AS2P59090 65 aa14.19□□□□□ -0.14
CHRNE-202ENST00000572438 HUWE1Q7Z6Z7 4374 aaKnown RBP14.18□□□□□ -0.14
CHRNE-202ENST00000572438 ZNF815PA8K554 130 aa14.18□□□□□ -0.14
CHRNE-202ENST00000572438 RBX1P62877 108 aa14.18□□□□□ -0.14
CHRNE-202ENST00000572438 CDKN2A-AS1Q9UH64 79 aa14.18□□□□□ -0.14
CHRNE-202ENST00000572438 COX6A2Q02221 97 aa14.18□□□□□ -0.14
CHRNE-202ENST00000572438 LELP1Q5T871 98 aa14.18□□□□□ -0.14
CHRNE-202ENST00000572438 PLEKHB2Q96CS7 222 aa14.18□□□□□ -0.14
CHRNE-202ENST00000572438 IGHV3-64A0A075B6Q5 118 aa14.17□□□□□ -0.14
CHRNE-202ENST00000572438 DEFB131BA0A096LNP1 70 aa14.17□□□□□ -0.14
CHRNE-202ENST00000572438 H3BRM9 83 aa14.17□□□□□ -0.14
CHRNE-202ENST00000572438 LGALS3P17931 250 aaKnown RBP14.17□□□□□ -0.14
CHRNE-202ENST00000572438 HSD52Q0P140 79 aa14.16□□□□□ -0.14
CHRNE-202ENST00000572438 BVES-AS1Q5T3Y7 98 aa14.16□□□□□ -0.14
CHRNE-202ENST00000572438 IGHV1-58A0A0C4DH39 117 aa14.15□□□□□ -0.14
CHRNE-202ENST00000572438 IGHV3-30-3P0DP02 117 aa14.15□□□□□ -0.14
CHRNE-202ENST00000572438 SPINK8P0C7L1 97 aa14.15□□□□□ -0.14
CHRNE-202ENST00000572438 LYPD5Q6UWN5 251 aa14.15□□□□□ -0.14
CHRNE-202ENST00000572438 TRAV8-3A0A0A6YYJ7 113 aa14.14□□□□□ -0.15
CHRNE-202ENST00000572438 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
CHRNE-202ENST00000572438 COL5A1-AS1Q5SY13 56 aa14.13□□□□□ -0.15
CHRNE-202ENST00000572438 SCGB1D4Q6XE38 83 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms