RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 CEMP1Q6PRD7 247 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 C2orf91Q6ZV80 131 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 LURAP1LQ8IV03 231 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 PCP2Q8IVA1 136 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 C2orf88Q9BSF0 95 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 TMEM243Q9BU79 118 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 TP73-AS1Q9UF72 201 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 CELA1Q9UNI1 258 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 CSDC2Q9Y534 153 aaKnown RBP4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 CMYA5Q8N3K9 4069 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 NBEAL2Q6ZNJ1 2754 aa4.31□□□□□ -1.72
TRAPPC1-204ENST00000571947 TRBV25-1A0A075B6N4 114 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 A0A0J9YXV3 536 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 PAX4O43316 350 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 ATP5G1P05496 136 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 GYPEP15421 78 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 TCTAP57738 103 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 HERVK_113P61574 105 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 DGAT2L7PQ6IED9 249 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 Q6ZUT4 128 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 ATP6V0E2Q8NHE4 81 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 CHAC1Q9BUX1 264 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 RETNQ9HD89 108 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 HIGD1BQ9P298 99 aa4.3□□□□□ -1.72
TRAPPC1-204ENST00000571947 TRBV6-8A0A0A6YYG3 113 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 TINCRA0A1B0GVN0 87 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 TMEM223A0PJW6 202 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 UBE2L6O14933 153 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 ZNF25P17030 456 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 TMEM170BQ5T4T1 132 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 KPRPQ5T749 579 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 FAM19A3Q7Z5A8 133 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 VSIG2Q96IQ7 327 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 MDFIQ99750 246 aa4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 C11orf68Q9H3H3 251 aaKnown RBP4.29□□□□□ -1.72
TRAPPC1-204ENST00000571947 TRRAPQ9Y4A5 3859 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 TRAV8-6A0A0B4J262 113 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 F5H768 121 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 K7EIL1 84 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 LEPROTO15243 131 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 HINT1P49773 126 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 UBE2D1P51668 147 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 TIRAPP58753 221 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 GAGE6Q13070 117 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 BATFQ16520 125 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 C12orf74Q32Q52 190 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 RNASE13Q5GAN3 156 aaKnown RBP4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 AMMECR1LQ6DCA0 310 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 OR5A1Q8NGJ0 315 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 TMEM101Q96IK0 257 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 TTTY13Q9BZ97 58 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 CDC42SE2Q9NRR3 84 aa4.28□□□□□ -1.72
TRAPPC1-204ENST00000571947 DNAH3Q8TD57 4116 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 IGLV5-45A0A087WSX0 123 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 TRAV26-1A0A087WT03 109 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 A0A0J9YY99 117 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 HSD52Q0P140 79 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 MRPL23Q16540 153 aaKnown RBP4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 MPV17L2Q567V2 206 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 BVES-AS1Q5T3Y7 98 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 SH2D6Q7Z4S9 175 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 PLEKHB2Q96CS7 222 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
TRAPPC1-204ENST00000571947 NOTCH1P46531 2555 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 TENM3Q9P273 2699 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 ZNF815PA8K554 130 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 H3BNG1 76 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 J3QQQ9 107 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 HTN3P15516 51 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 TSPEAR-AS2P59090 65 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 HERVK_113P63121 156 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 SEC11AP67812 179 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 TAL2Q16559 108 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 COL5A1-AS1Q5SY13 56 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 LINC00242Q5T6M2 205 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 SPATA25Q9BR10 227 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 TM2D3Q9BRN9 247 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 GEMIN7Q9H840 131 aaKnown RBP4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 ICOSQ9Y6W8 199 aa4.26□□□□□ -1.73
TRAPPC1-204ENST00000571947 IGLV4-60A0A075B6I1 120 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 A0A096LPF7 62 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 IGHV1-58A0A0C4DH39 117 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 A0A0J9YWU9 116 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 A0A1B0GUV1 79 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 A0A1B0GV90 55 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 H3BRM9 83 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 PRB2P02812 416 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 COX6A2Q02221 97 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 LINC00469Q8N7U9 141 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 ORAOV1Q8WV07 137 aa4.25□□□□□ -1.73
TRAPPC1-204ENST00000571947 TRAV8-3A0A0A6YYJ7 113 aa4.24□□□□□ -1.73
TRAPPC1-204ENST00000571947 TRAV13-1A0A0B4J241 112 aa4.24□□□□□ -1.73
TRAPPC1-204ENST00000571947 IGHV3-30-3P0DP02 117 aa4.24□□□□□ -1.73
TRAPPC1-204ENST00000571947 RBX1P62877 108 aa4.24□□□□□ -1.73
TRAPPC1-204ENST00000571947 DEFB121Q5J5C9 76 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms