RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 K7EP13 123 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 PSCAO43653 123 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 CRPP02741 224 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 FGF6P10767 208 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 KRTAP10-1P60331 282 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 LINC00269Q8N2A0 174 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 YPEL4Q96NS1 127 aa8.89□□□□□ -0.99
CCDC40-205ENST00000571028 ESDP10768 282 aa8.88□□□□□ -0.99
CCDC40-205ENST00000571028 RPL32P62910 135 aaKnown RBP8.88□□□□□ -0.99
CCDC40-205ENST00000571028 Q6ZRN7 208 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-205ENST00000571028 NFE4Q86UQ8 179 aa8.88□□□□□ -0.99
CCDC40-205ENST00000571028 ALKBH7Q9BT30 221 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-205ENST00000571028 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
CCDC40-205ENST00000571028 IGKV2D-24A0A075B6R9 120 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 TRAV8-3A0A0A6YYJ7 113 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 GCSHP23434 173 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 IFI27P40305 119 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-205ENST00000571028 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 ENHOQ6UWT2 76 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 Q8N8P6 123 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 C20orf203Q8NBC4 194 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 PRSS3P2Q8NHM4 247 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 TMEM101Q96IK0 257 aa8.87□□□□□ -0.99
CCDC40-205ENST00000571028 H7C423 109 aa8.86□□□□□ -0.99
CCDC40-205ENST00000571028 HAMPP81172 84 aa8.86□□□□□ -0.99
CCDC40-205ENST00000571028 LAGE3Q14657 143 aa8.86□□□□□ -0.99
CCDC40-205ENST00000571028 OR5A1Q8NGJ0 315 aa8.86□□□□□ -0.99
CCDC40-205ENST00000571028 IGLV10-54A0A075B6I4 117 aa8.85□□□□□ -0.99
CCDC40-205ENST00000571028 A0A087WTM6 91 aa8.85□□□□□ -0.99
CCDC40-205ENST00000571028 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
CCDC40-205ENST00000571028 PRSS47A8MTI9 375 aa8.85□□□□□ -0.99
CCDC40-205ENST00000571028 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
CCDC40-205ENST00000571028 REG3AQ06141 175 aa8.85□□□□□ -0.99
CCDC40-205ENST00000571028 Q0VG73 95 aa8.85□□□□□ -0.99
CCDC40-205ENST00000571028 TMEM18Q96B42 140 aa8.85□□□□□ -0.99
CCDC40-205ENST00000571028 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
CCDC40-205ENST00000571028 RNASE13Q5GAN3 156 aaKnown RBP8.84□□□□□ -0.99
CCDC40-205ENST00000571028 RMI2Q96E14 147 aa8.84□□□□□ -0.99
CCDC40-205ENST00000571028 TM2D2Q9BX73 214 aa8.84□□□□□ -0.99
CCDC40-205ENST00000571028 ATP6V1G1O75348 118 aa8.83□□□□□ -1
CCDC40-205ENST00000571028 FA2HQ7L5A8 372 aa8.83□□□□□ -1
CCDC40-205ENST00000571028 C1orf43Q9BWL3 253 aa8.83□□□□□ -1
CCDC40-205ENST00000571028 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
CCDC40-205ENST00000571028 COLCA2A8K830 154 aa8.82□□□□□ -1
CCDC40-205ENST00000571028 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
CCDC40-205ENST00000571028 LECT2O14960 151 aa8.82□□□□□ -1
CCDC40-205ENST00000571028 PLA2G1BP04054 148 aaKnown RBP8.82□□□□□ -1
CCDC40-205ENST00000571028 ZNF25P17030 456 aaPredicted RBP8.82□□□□□ -1
CCDC40-205ENST00000571028 PLA2G2DQ9UNK4 145 aa8.82□□□□□ -1
CCDC40-205ENST00000571028 TRGC2P03986 189 aa8.81□□□□□ -1
CCDC40-205ENST00000571028 S100A1P23297 94 aa8.81□□□□□ -1
CCDC40-205ENST00000571028 SMAGPQ0VAQ4 97 aa8.81□□□□□ -1
CCDC40-205ENST00000571028 MIAQ16674 131 aa8.81□□□□□ -1
CCDC40-205ENST00000571028 ORMDL2Q53FV1 153 aa8.81□□□□□ -1
CCDC40-205ENST00000571028 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
CCDC40-205ENST00000571028 MRPL52Q86TS9 123 aaKnown RBP8.81□□□□□ -1
CCDC40-205ENST00000571028 BAALCQ8WXS3 180 aa8.81□□□□□ -1
CCDC40-205ENST00000571028 OPRPNQ99935 248 aaPredicted RBP8.81□□□□□ -1
CCDC40-205ENST00000571028 PRR34Q9NV39 138 aa8.81□□□□□ -1
CCDC40-205ENST00000571028 IGLV5-52A0A0A0MRZ9 124 aa8.8□□□□□ -1
CCDC40-205ENST00000571028 Q6ZUT4 128 aa8.8□□□□□ -1
CCDC40-205ENST00000571028 ZNF664Q8N3J9 261 aa8.8□□□□□ -1
CCDC40-205ENST00000571028 C18orf32Q8TCD1 76 aa8.8□□□□□ -1
CCDC40-205ENST00000571028 CDC42SE2Q9NRR3 84 aa8.8□□□□□ -1
CCDC40-205ENST00000571028 CYSLTR1Q9Y271 337 aa8.8□□□□□ -1
CCDC40-205ENST00000571028 COX11Q9Y6N1 276 aa8.79□□□□□ -1
CCDC40-205ENST00000571028 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
CCDC40-205ENST00000571028 GAGE12HA6NDE8 117 aa8.78□□□□□ -1
CCDC40-205ENST00000571028 WFDC2Q14508 124 aa8.78□□□□□ -1
CCDC40-205ENST00000571028 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
CCDC40-205ENST00000571028 SPANXA1Q9NS26 97 aa8.78□□□□□ -1
CCDC40-205ENST00000571028 TRAV8-4A0A0B4J246 113 aa8.77□□□□□ -1.01
CCDC40-205ENST00000571028 LINC00959A0A1B0GUT2 108 aa8.77□□□□□ -1.01
CCDC40-205ENST00000571028 K7EMI3 77 aa8.77□□□□□ -1.01
CCDC40-205ENST00000571028 SS18Q15532 418 aa8.77□□□□□ -1.01
CCDC40-205ENST00000571028 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
CCDC40-205ENST00000571028 LRCOL1A6NCL2 159 aa8.76□□□□□ -1.01
CCDC40-205ENST00000571028 CCL25O15444 150 aa8.76□□□□□ -1.01
CCDC40-205ENST00000571028 LINC00614P0C842 121 aa8.76□□□□□ -1.01
CCDC40-205ENST00000571028 XCL1P47992 114 aa8.76□□□□□ -1.01
CCDC40-205ENST00000571028 PMCHL1Q16048 86 aa8.76□□□□□ -1.01
CCDC40-205ENST00000571028 URB1-AS1Q96HZ7 61 aa8.76□□□□□ -1.01
CCDC40-205ENST00000571028 CSDC2Q9Y534 153 aaKnown RBP8.76□□□□□ -1.01
CCDC40-205ENST00000571028 HMCN2Q8NDA2 5059 aa8.75□□□□□ -1.01
CCDC40-205ENST00000571028 ZC2HC1BQ5TFG8 222 aa8.75□□□□□ -1.01
CCDC40-205ENST00000571028 BAGE3Q86Y29 109 aa8.75□□□□□ -1.01
CCDC40-205ENST00000571028 NTN5Q8WTR8 489 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-205ENST00000571028 SCGB3A1Q96QR1 104 aa8.75□□□□□ -1.01
CCDC40-205ENST00000571028 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
CCDC40-205ENST00000571028 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-205ENST00000571028 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
CCDC40-205ENST00000571028 IFITM10A6NMD0 228 aa8.74□□□□□ -1.01
CCDC40-205ENST00000571028 USP17L23D6RBM5 183 aa8.74□□□□□ -1.01
CCDC40-205ENST00000571028 G0S2P27469 103 aa8.74□□□□□ -1.01
CCDC40-205ENST00000571028 RAB5BP61020 215 aa8.74□□□□□ -1.01
CCDC40-205ENST00000571028 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
CCDC40-205ENST00000571028 LINC00528Q8N1L1 170 aa8.74□□□□□ -1.01
CCDC40-205ENST00000571028 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms