RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 LINC00467Q9BRT7 94 aa1.94□□□□□ -2.1
CNOT1-221ENST00000569924 SLC50A1Q9BRV3 221 aa1.94□□□□□ -2.1
CNOT1-221ENST00000569924 TMEM70Q9BUB7 260 aa1.94□□□□□ -2.1
CNOT1-221ENST00000569924 NKX6-2Q9C056 277 aaPredicted RBP1.94□□□□□ -2.1
CNOT1-221ENST00000569924 RNASE7Q9H1E1 156 aaKnown RBP1.94□□□□□ -2.1
CNOT1-221ENST00000569924 MIXL1Q9H2W2 232 aa1.94□□□□□ -2.1
CNOT1-221ENST00000569924 PAIP2BQ9ULR5 123 aaKnown RBP1.94□□□□□ -2.1
CNOT1-221ENST00000569924 ICOSQ9Y6W8 199 aa1.94□□□□□ -2.1
CNOT1-221ENST00000569924 TRGV2A0A075B6R0 118 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 A6NED7 52 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 A8MUN3 132 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 A8MUU9 505 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 SPINK4O60575 86 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 ZNF324O75467 553 aaPredicted RBP1.93□□□□□ -2.1
CNOT1-221ENST00000569924 SFT2D2O95562 160 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 C1QBP02746 253 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 KRTAP1-4P0C5Y4 121 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 DNAH10OSP0CZ25 163 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 IGLC2P0DOY2 106 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 RPS20P60866 119 aaKnown RBP1.93□□□□□ -2.1
CNOT1-221ENST00000569924 MRPL51Q4U2R6 128 aaKnown RBP1.93□□□□□ -2.1
CNOT1-221ENST00000569924 SPANXN5Q5MJ07 72 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 LYPD5Q6UWN5 251 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 TMEM14EPQ6UXP3 125 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 PATE2Q6UY27 113 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 GOLT1AQ6ZVE7 132 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 SCXQ7RTU7 201 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 BPIFA4PQ86YQ2 179 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 C10orf126Q8N4M7 172 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 ZFAND2AQ8N6M9 145 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 DEDD2Q8WXF8 326 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 HIST1H2BAQ96A08 127 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 UBE2WQ96B02 151 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 SLC25A21Q9BQT8 299 aaPredicted RBP1.93□□□□□ -2.1
CNOT1-221ENST00000569924 NPVFQ9HCQ7 196 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 UQCC1Q9NVA1 299 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 PRO0255Q9UI72 69 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 FUT9Q9Y231 359 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 LY96Q9Y6Y9 160 aa1.93□□□□□ -2.1
CNOT1-221ENST00000569924 TRGV1A0A0A0MS02 117 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 TRAV12-3A0A0B4J271 114 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 A0A1B0GW54 56 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 C7orf66A4D0T2 115 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 C7orf71A4D174 169 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 LRCOL1A6NCL2 159 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 C9JCJ5 164 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 H3BQ15 152 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 SLC17A3O00476 420 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 LECT2O14960 151 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 SH2D1AO60880 128 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 SMR3BP02814 79 aaPredicted RBP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 SLC25A5P05141 298 aaKnown RBP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 NMBP08949 121 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 IGHV3-30-3P0DP02 117 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 EVI2AP22794 236 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 FAUP35544 74 aaKnown RBP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 FUSP35637 526 aaKnown RBP eCLIP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 TAS2R30P59541 319 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 SPCS2Q15005 226 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 IBA57Q5T440 356 aaKnown RBP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 Q6ZQT7 251 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 LINC00305Q7Z4B0 112 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 EIF4E3Q8N5X7 224 aaKnown RBP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 Q8N9L7 120 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 ZNF431Q8TF32 576 aaPredicted RBP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 GGACTQ9BVM4 153 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 MRPL32Q9BYC8 188 aaKnown RBP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 PSENENQ9NZ42 101 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 HHLA3Q9XRX5 114 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 FAT3Q8TDW7 4589 aa1.92□□□□□ -2.1
CNOT1-221ENST00000569924 SYNE2Q8WXH0 6885 aaKnown RBP1.92□□□□□ -2.1
CNOT1-221ENST00000569924 LRP1Q07954 4544 aaKnown RBP1.91□□□□□ -2.1
CNOT1-221ENST00000569924 TRBV19A0A075B6N1 114 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 TRAV5A0A0B4J249 113 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 A0A0B4J2C4 111 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 C9orf170A2RU37 121 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 H3BQ85 93 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 HMGB3O15347 200 aaKnown RBP1.91□□□□□ -2.1
CNOT1-221ENST00000569924 PLA2G10O15496 165 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 SLC25A20O43772 301 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 SSSCA1O60232 199 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 IGHV3-53P01767 116 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 NBEAP1P0C6P0 100 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 METTL15P1P0C7V9 234 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 SRIP30626 198 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 RNASE4P34096 147 aaKnown RBP1.91□□□□□ -2.1
CNOT1-221ENST00000569924 TMBIM6P55061 237 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 DEFA1P59665 94 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 RRAS2P62070 204 aaPredicted RBP1.91□□□□□ -2.1
CNOT1-221ENST00000569924 SLC38A11Q08AI6 406 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 PDE6HQ13956 83 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 C10orf113Q5VZT2 155 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 Q6ZSA8 131 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 SH2D6Q7Z4S9 175 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 WFDC10BQ8IUB3 73 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 TOMM5Q8N4H5 51 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 C12orf45Q8N5I9 185 aaPredicted RBP1.91□□□□□ -2.1
CNOT1-221ENST00000569924 OR10P1Q8NGE3 313 aa1.91□□□□□ -2.1
CNOT1-221ENST00000569924 DEFB104AQ8WTQ1 72 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms