RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
SPG7-222ENST00000569820 MYO9AB2RTY4 2548 aa8.84□□□□□ -0.99
SPG7-222ENST00000569820 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
SPG7-222ENST00000569820 H3BT86 120 aa8.84□□□□□ -0.99
SPG7-222ENST00000569820 TRACP01848 142 aa8.84□□□□□ -0.99
SPG7-222ENST00000569820 MALP21145 153 aa8.84□□□□□ -0.99
SPG7-222ENST00000569820 C20orf173Q96LM9 149 aa8.84□□□□□ -0.99
SPG7-222ENST00000569820 HECTD1Q9ULT8 2610 aa8.84□□□□□ -0.99
SPG7-222ENST00000569820 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
SPG7-222ENST00000569820 H7C423 109 aa8.83□□□□□ -1
SPG7-222ENST00000569820 GNRH2O43555 120 aa8.83□□□□□ -1
SPG7-222ENST00000569820 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
SPG7-222ENST00000569820 ACANP16112 2415 aa8.83□□□□□ -1
SPG7-222ENST00000569820 DNAJC9-AS1A6NH13 148 aa8.83□□□□□ -1
SPG7-222ENST00000569820 RNASE4P34096 147 aaKnown RBP8.83□□□□□ -1
SPG7-222ENST00000569820 LINC00315P59091 139 aa8.83□□□□□ -1
SPG7-222ENST00000569820 SUMO4Q6EEV6 95 aa8.83□□□□□ -1
SPG7-222ENST00000569820 UBE2E2Q96LR5 201 aa8.83□□□□□ -1
SPG7-222ENST00000569820 C2orf48Q96LS8 159 aa8.83□□□□□ -1
SPG7-222ENST00000569820 ZNF256Q9Y2P7 627 aaPredicted RBP8.83□□□□□ -1
SPG7-222ENST00000569820 KIF25-AS1Q9Y6Z4 181 aa8.83□□□□□ -1
SPG7-222ENST00000569820 SDHAF1A6NFY7 115 aa8.82□□□□□ -1
SPG7-222ENST00000569820 MUC4Q99102 2169 aa8.82□□□□□ -1
SPG7-222ENST00000569820 A0A0J9YX75 114 aa8.82□□□□□ -1
SPG7-222ENST00000569820 COX6CP09669 75 aa8.82□□□□□ -1
SPG7-222ENST00000569820 ICOSQ9Y6W8 199 aa8.82□□□□□ -1
SPG7-222ENST00000569820 F5H697 171 aa8.81□□□□□ -1
SPG7-222ENST00000569820 NXPH4O95158 308 aa8.81□□□□□ -1
SPG7-222ENST00000569820 CXCL5P42830 114 aa8.81□□□□□ -1
SPG7-222ENST00000569820 ESM1Q9NQ30 184 aa8.81□□□□□ -1
SPG7-222ENST00000569820 A0A0J9YXY3 114 aa8.81□□□□□ -1
SPG7-222ENST00000569820 TRBV27A0A0K0K1C4 114 aa8.81□□□□□ -1
SPG7-222ENST00000569820 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
SPG7-222ENST00000569820 LINC00643Q86TS7 51 aa8.81□□□□□ -1
SPG7-222ENST00000569820 DEFB1P60022 68 aa8.8□□□□□ -1
SPG7-222ENST00000569820 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
SPG7-222ENST00000569820 Q6ZSV7 163 aa8.8□□□□□ -1
SPG7-222ENST00000569820 OPRPNQ99935 248 aaPredicted RBP8.8□□□□□ -1
SPG7-222ENST00000569820 JPT2Q9H910 190 aa8.8□□□□□ -1
SPG7-222ENST00000569820 ANK3Q12955 4377 aaKnown RBP8.8□□□□□ -1
SPG7-222ENST00000569820 IGKV3-7A0A075B6H7 116 aa8.8□□□□□ -1
SPG7-222ENST00000569820 A0A087WWL8 130 aa8.8□□□□□ -1
SPG7-222ENST00000569820 PRSS2P07478 247 aa8.8□□□□□ -1
SPG7-222ENST00000569820 HOXD3P31249 432 aaPredicted RBP8.8□□□□□ -1
SPG7-222ENST00000569820 C18orf65Q6ZTR6 163 aa8.8□□□□□ -1
SPG7-222ENST00000569820 CUBNO60494 3623 aa8.79□□□□□ -1
SPG7-222ENST00000569820 ATOX1O00244 68 aa8.79□□□□□ -1
SPG7-222ENST00000569820 OXTP01178 125 aa8.79□□□□□ -1
SPG7-222ENST00000569820 SYNJ2BPP57105 145 aa8.79□□□□□ -1
SPG7-222ENST00000569820 SEC61GP60059 68 aa8.79□□□□□ -1
SPG7-222ENST00000569820 TINCRA0A1B0GVN0 87 aa8.79□□□□□ -1
SPG7-222ENST00000569820 hADV29S1A0JD25 119 aa8.79□□□□□ -1
SPG7-222ENST00000569820 DCANP1Q8TF63 244 aa8.79□□□□□ -1
SPG7-222ENST00000569820 CLEC2BQ92478 149 aa8.79□□□□□ -1
SPG7-222ENST00000569820 NF1P21359 2839 aa8.78□□□□□ -1
SPG7-222ENST00000569820 DEFB136Q30KP8 78 aa8.78□□□□□ -1
SPG7-222ENST00000569820 C5orf38Q86SI9 138 aa8.78□□□□□ -1
SPG7-222ENST00000569820 FAM19A4Q96LR4 140 aa8.78□□□□□ -1
SPG7-222ENST00000569820 A0A0J9YXV3 536 aa8.77□□□□□ -1
SPG7-222ENST00000569820 TRBV6-5A0A0K0K1A5 114 aa8.77□□□□□ -1
SPG7-222ENST00000569820 ADARB2-AS1A8MUL3 147 aa8.77□□□□□ -1
SPG7-222ENST00000569820 NSUN5P1Q3KNT7 163 aa8.77□□□□□ -1
SPG7-222ENST00000569820 APRG1Q8IVJ8 170 aa8.77□□□□□ -1
SPG7-222ENST00000569820 F6UB75 175 aa8.77□□□□□ -1.01
SPG7-222ENST00000569820 LST1O00453 97 aa8.77□□□□□ -1.01
SPG7-222ENST00000569820 IGHV3-30-3P0DP02 117 aa8.77□□□□□ -1.01
SPG7-222ENST00000569820 RHOHQ15669 191 aa8.77□□□□□ -1.01
SPG7-222ENST00000569820 LITAFQ99732 161 aa8.77□□□□□ -1.01
SPG7-222ENST00000569820 PYGO1Q9Y3Y4 419 aa8.77□□□□□ -1.01
SPG7-222ENST00000569820 HIST1H4AP62805 103 aaKnown RBP8.76□□□□□ -1.01
SPG7-222ENST00000569820 FAM74A4Q5TZK3 123 aa8.76□□□□□ -1.01
SPG7-222ENST00000569820 C4orf3Q8WVX3 66 aa8.76□□□□□ -1.01
SPG7-222ENST00000569820 TIMM21Q9BVV7 248 aa8.76□□□□□ -1.01
SPG7-222ENST00000569820 MTORP42345 2549 aa8.76□□□□□ -1.01
SPG7-222ENST00000569820 SLURP1P55000 103 aa8.76□□□□□ -1.01
SPG7-222ENST00000569820 OTOGQ6ZRI0 2925 aa8.75□□□□□ -1.01
SPG7-222ENST00000569820 RS1O15537 224 aa8.75□□□□□ -1.01
SPG7-222ENST00000569820 C1orf43Q9BWL3 253 aa8.75□□□□□ -1.01
SPG7-222ENST00000569820 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
SPG7-222ENST00000569820 HIST2H2BDQ6DRA6 164 aa8.75□□□□□ -1.01
SPG7-222ENST00000569820 SDIM1Q6ZPB5 146 aa8.75□□□□□ -1.01
SPG7-222ENST00000569820 SMR3AQ99954 134 aa8.75□□□□□ -1.01
SPG7-222ENST00000569820 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 I3L3M4 83 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 RNASE1P07998 156 aaKnown RBP8.74□□□□□ -1.01
SPG7-222ENST00000569820 MIAQ16674 131 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 ADAMTSL4-AS1Q5T5F5 129 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 C20orf203Q8NBC4 194 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 DSCR8Q96T75 97 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 TRAV8-3A0A0A6YYJ7 113 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 NPC2P61916 151 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 KHDC1LQ5JSQ8 128 aa8.74□□□□□ -1.01
SPG7-222ENST00000569820 K7EQG2 157 aa8.73□□□□□ -1.01
SPG7-222ENST00000569820 TMEM61Q8N0U2 210 aa8.73□□□□□ -1.01
SPG7-222ENST00000569820 M0QY20 66 aa8.72□□□□□ -1.01
SPG7-222ENST00000569820 NDUFA12Q9UI09 145 aa8.72□□□□□ -1.01
SPG7-222ENST00000569820 SMCR5Q8TEV8 140 aa8.72□□□□□ -1.01
SPG7-222ENST00000569820 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
SPG7-222ENST00000569820 KLLNB2CW77 178 aa8.71□□□□□ -1.01
SPG7-222ENST00000569820 IGHV1-58A0A0C4DH39 117 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms