RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 F8WEM9 126 aa3.11□□□□□ -1.91
UBR1-208ENST00000569066 PRB4P10163 310 aaPredicted RBP3.11□□□□□ -1.91
UBR1-208ENST00000569066 LINC00313P59037 77 aa3.11□□□□□ -1.91
UBR1-208ENST00000569066 KLKP1Q107X0 134 aa3.11□□□□□ -1.91
UBR1-208ENST00000569066 DYNAPQ8N1N2 210 aa3.11□□□□□ -1.91
UBR1-208ENST00000569066 TMEM263Q8WUH6 116 aaKnown RBP3.11□□□□□ -1.91
UBR1-208ENST00000569066 UBE2D4Q9Y2X8 147 aa3.11□□□□□ -1.91
UBR1-208ENST00000569066 IGKV1-9A0A0C4DH69 117 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 FAM216BQ8N7L0 139 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 DYNLRB1Q9NP97 96 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 SDK2Q58EX2 2172 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 LTBP2Q14767 1821 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 IGKV1OR2-108A0A075B7D4 117 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 IGHV1-45A0A0A0MS14 117 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 TRAV13-2A0A0B4J235 113 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 TRBV30A0A0K0K1B3 111 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 D6R8Y8 96 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 NDUFA3O95167 84 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 COX6B1P14854 86 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 KRTAP10-8P60410 259 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 SCGB1D4Q6XE38 83 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 LCA10Q71F78 164 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 U3KQK5 164 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 KNTC1P50748 2209 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 USP34Q70CQ2 3546 aa3.1□□□□□ -1.91
UBR1-208ENST00000569066 A0A0J9YY99 117 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 ZNF815PA8K554 130 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 FSTL3O95633 263 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 BAALC-AS2P0C853 105 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 PI4KAP42356 2102 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 SNURFQ9Y675 71 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 DNAJC13O75165 2243 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 COL5A1P20908 1838 aaPredicted RBP3.09□□□□□ -1.91
UBR1-208ENST00000569066 COL4A6Q14031 1691 aa3.09□□□□□ -1.91
UBR1-208ENST00000569066 DOCK10Q96BY6 2186 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 A6NN06 94 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 E7EQL1 145 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 UBE2L6O14933 153 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 ARMS2P0C7Q2 107 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 RPL28P46779 137 aaKnown RBP3.09□□□□□ -1.92
UBR1-208ENST00000569066 Q6JHZ5 121 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 MIR17HGQ75NE6 70 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 VN1R4Q7Z5H5 301 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 CLEC2BQ92478 149 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 UNC13CQ8NB66 2214 aa3.09□□□□□ -1.92
UBR1-208ENST00000569066 COL4A1P02462 1669 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 BUB1B-PAK6H3BSN5 160 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 ESRGQ1W209 222 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 GPHB5Q86YW7 130 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 DAND5Q8N907 189 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 DIRC1Q969H9 104 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 SPTSSAQ969W0 71 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 IGHV3-43A0A0B4J1X8 118 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 LINC01546A6NGU7 62 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 A8MWP4 228 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 IGKV1-16P04430 117 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 FUSP35637 526 aaKnown RBP eCLIP3.08□□□□□ -1.92
UBR1-208ENST00000569066 Q1T7F1 81 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 PRR9Q5T870 116 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 C22orf24Q9Y442 160 aa3.08□□□□□ -1.92
UBR1-208ENST00000569066 TRAV23DV6A0A075B6W5 121 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 IGLV3-32A0A0A0MS00 114 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 A0A1B0GUT8 65 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 C5orf67F2Z3F1 127 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 COX7A2LO14548 114 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 PLNP26678 52 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 ATP5EP56381 51 aaPredicted RBP3.07□□□□□ -1.92
UBR1-208ENST00000569066 TMEM167BQ9NRX6 74 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 IGKV1D-42A0A075B6H8 117 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 KRTAP13-3Q3SY46 172 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 C7orf65Q6ZTY9 151 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 C1orf64Q8NEQ6 169 aa3.07□□□□□ -1.92
UBR1-208ENST00000569066 BLCAPP62952 87 aa3.06□□□□□ -1.92
UBR1-208ENST00000569066 SPINK9Q5DT21 86 aa3.06□□□□□ -1.92
UBR1-208ENST00000569066 LINC00846Q9NV44 126 aa3.06□□□□□ -1.92
UBR1-208ENST00000569066 ICOSQ9Y6W8 199 aa3.06□□□□□ -1.92
UBR1-208ENST00000569066 M0R135 149 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 MIFP14174 115 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 RNASE4P34096 147 aaKnown RBP3.05□□□□□ -1.92
UBR1-208ENST00000569066 UBE2BP63146 152 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 PLGLAQ15195 96 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 MRPL51Q4U2R6 128 aaKnown RBP3.05□□□□□ -1.92
UBR1-208ENST00000569066 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.05□□□□□ -1.92
UBR1-208ENST00000569066 CCL13Q99616 98 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 PLCE1Q9P212 2302 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 TRAV7A0A075B6U4 112 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 TRAV3A0A0B4J244 114 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 F8VRH5 84 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 TFF1P04155 84 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 CKS2P33552 79 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 WFDC9Q8NEX5 89 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 TOMM6Q96B49 74 aa3.05□□□□□ -1.92
UBR1-208ENST00000569066 UTRNP46939 3433 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 IGHV3-21A0A0B4J1V1 117 aa3.04□□□□□ -1.92
UBR1-208ENST00000569066 TRAV22A0A0B4J277 110 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms