RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 TRAV4A0A0B4J268 109 aa6.91□□□□□ -1.3
TCF4-240ENST00000568673 RPL36AP83881 106 aaKnown RBP6.91□□□□□ -1.3
TCF4-240ENST00000568673 RPL36ALQ969Q0 106 aaKnown RBP6.91□□□□□ -1.3
TCF4-240ENST00000568673 VSIG2Q96IQ7 327 aa6.91□□□□□ -1.3
TCF4-240ENST00000568673 TEX48A0A1B0GUV7 120 aa6.91□□□□□ -1.3
TCF4-240ENST00000568673 K7EQD1 137 aa6.91□□□□□ -1.3
TCF4-240ENST00000568673 NDUFA7O95182 113 aa6.91□□□□□ -1.3
TCF4-240ENST00000568673 DGAT2L7PQ6IED9 249 aa6.91□□□□□ -1.3
TCF4-240ENST00000568673 NOP10Q9NPE3 64 aaKnown RBP6.91□□□□□ -1.3
TCF4-240ENST00000568673 PRO1854Q9UHT4 67 aa6.91□□□□□ -1.3
TCF4-240ENST00000568673 PRO0461Q9UI25 63 aa6.91□□□□□ -1.3
TCF4-240ENST00000568673 LOC107984156A0A0G2JMH3 177 aa6.9□□□□□ -1.3
TCF4-240ENST00000568673 DAZ4Q86SG3 579 aaKnown RBP6.9□□□□□ -1.3
TCF4-240ENST00000568673 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.3
TCF4-240ENST00000568673 ARL17AQ8IVW1 177 aa6.9□□□□□ -1.3
TCF4-240ENST00000568673 C1QTNF4Q9BXJ3 329 aa6.9□□□□□ -1.3
TCF4-240ENST00000568673 WFDC10AQ9H1F0 79 aa6.9□□□□□ -1.3
TCF4-240ENST00000568673 GEMIN7Q9H840 131 aaKnown RBP6.9□□□□□ -1.3
TCF4-240ENST00000568673 DAZ3Q9NR90 486 aaKnown RBP6.9□□□□□ -1.3
TCF4-240ENST00000568673 TIRAPP58753 221 aa6.9□□□□□ -1.31
TCF4-240ENST00000568673 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.31
TCF4-240ENST00000568673 C16orf74Q96GX8 76 aa6.9□□□□□ -1.31
TCF4-240ENST00000568673 PLAC8L1A1L4L8 177 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 SPINK8P0C7L1 97 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 SFTA2Q6UW10 78 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 CSNK1G2-AS1Q8NCQ2 148 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 LITAFQ99732 161 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 CSDC2Q9Y534 153 aaKnown RBP6.89□□□□□ -1.31
TCF4-240ENST00000568673 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
TCF4-240ENST00000568673 ETDBQ3ZM63 59 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 HIVEP2P31629 2446 aa6.89□□□□□ -1.31
TCF4-240ENST00000568673 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.88□□□□□ -1.31
TCF4-240ENST00000568673 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 PSMB2P49721 201 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 FASNP49327 2511 aaKnown RBP6.88□□□□□ -1.31
TCF4-240ENST00000568673 TRBV20-1A0A075B6N2 111 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 CIDEAO60543 219 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 ZFAND6Q6FIF0 208 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 SH2D6Q7Z4S9 175 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
TCF4-240ENST00000568673 TRGV2A0A075B6R0 118 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 GAGE12JA6NER3 117 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 A8MZ25 164 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
TCF4-240ENST00000568673 IGHV3-33P01772 117 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 GAGE4Q13068 117 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 GAGE5Q13069 117 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 FAM19A3Q7Z5A8 133 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.87□□□□□ -1.31
TCF4-240ENST00000568673 SMR3AQ99954 134 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 SPANXCQ9NY87 97 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 J3QR89 54 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 PRSS2P07478 247 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 HERVK_113P63121 156 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 COX6A2Q02221 97 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 ADAMTSL4-AS1Q5T5F5 129 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 LINC00242Q5T6M2 205 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 SBSPONQ8IVN8 264 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 GTSF1LQ9H1H1 148 aa6.87□□□□□ -1.31
TCF4-240ENST00000568673 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 GAGE7O76087 117 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 TCL1BO95988 128 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 GAGE12FP0CL80 117 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 GAGE12GP0CL81 117 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 GAGE12IP0CL82 117 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 TMEM101Q96IK0 257 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 ERG28Q9UKR5 140 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 C2CD3Q4AC94 2353 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 SCGB1C2P0DMR2 95 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 SMCPP49901 116 aaPredicted RBP6.86□□□□□ -1.31
TCF4-240ENST00000568673 KRTAP10-3P60369 221 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 CDC42SE2Q9NRR3 84 aa6.86□□□□□ -1.31
TCF4-240ENST00000568673 TIMM17BO60830 172 aa6.85□□□□□ -1.31
TCF4-240ENST00000568673 MIAQ16674 131 aa6.85□□□□□ -1.31
TCF4-240ENST00000568673 GCN1Q92616 2671 aaKnown RBP6.85□□□□□ -1.31
TCF4-240ENST00000568673 IGLV5-39A0A0G2JS06 123 aa6.84□□□□□ -1.31
TCF4-240ENST00000568673 NDUFA1O15239 70 aa6.84□□□□□ -1.31
TCF4-240ENST00000568673 ATP6V0E2Q8NHE4 81 aa6.84□□□□□ -1.31
TCF4-240ENST00000568673 RNF183Q96D59 192 aa6.84□□□□□ -1.31
TCF4-240ENST00000568673 TRAV13-1A0A0B4J241 112 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 TRGV4A0A0C4DH28 118 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 UBE2L6O14933 153 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 LY6G6DO95868 133 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 TMEM243Q9BU79 118 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 C1orf43Q9BWL3 253 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 H7C2G1 150 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 H7C423 109 aa6.83□□□□□ -1.32
TCF4-240ENST00000568673 LOC100131303A0A0U1RQF7 123 aa6.82□□□□□ -1.32
TCF4-240ENST00000568673 IFITM1P13164 125 aa6.82□□□□□ -1.32
TCF4-240ENST00000568673 CIRBPQ14011 172 aaKnown RBP6.82□□□□□ -1.32
TCF4-240ENST00000568673 FHL2Q14192 279 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms