RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 H3BQ85 93 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 ATP5EP2Q5VTU8 51 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 IGF2-ASQ6U949 168 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 CXCL5P42830 114 aa9.21□□□□□ -0.93
CSPG4P13-202ENST00000567704 TIMM17BO60830 172 aa9.21□□□□□ -0.93
CSPG4P13-202ENST00000567704 APOC4P55056 127 aa9.21□□□□□ -0.93
CSPG4P13-202ENST00000567704 TSPEAR-AS2P59090 65 aa9.21□□□□□ -0.93
CSPG4P13-202ENST00000567704 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.93
CSPG4P13-202ENST00000567704 ODF3Q96PU9 254 aa9.21□□□□□ -0.93
CSPG4P13-202ENST00000567704 Q6ZSV7 163 aa9.21□□□□□ -0.94
CSPG4P13-202ENST00000567704 SNURFQ9Y675 71 aa9.21□□□□□ -0.94
CSPG4P13-202ENST00000567704 FAM240AA0A1B0GVK7 77 aa9.2□□□□□ -0.94
CSPG4P13-202ENST00000567704 EBI3Q14213 229 aa9.2□□□□□ -0.94
CSPG4P13-202ENST00000567704 SMIM9A6NGZ8 99 aa9.2□□□□□ -0.94
CSPG4P13-202ENST00000567704 A6NDX4 124 aa9.2□□□□□ -0.94
CSPG4P13-202ENST00000567704 ADORA2A-AS1P86434 159 aa9.2□□□□□ -0.94
CSPG4P13-202ENST00000567704 NDUFC2-KCTD14E9PQ53 114 aa9.2□□□□□ -0.94
CSPG4P13-202ENST00000567704 NDUFS5O43920 106 aa9.2□□□□□ -0.94
CSPG4P13-202ENST00000567704 BPY2O14599 106 aa9.19□□□□□ -0.94
CSPG4P13-202ENST00000567704 MAP6D1Q9H9H5 199 aa9.19□□□□□ -0.94
CSPG4P13-202ENST00000567704 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
CSPG4P13-202ENST00000567704 CRYGDP07320 174 aa9.19□□□□□ -0.94
CSPG4P13-202ENST00000567704 IBA57-AS1B1ANH7 110 aa9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 KLK5Q9Y337 293 aaPredicted RBP9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 CCDC168Q8NDH2 2452 aa9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 C10orf142B7Z368 130 aa9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 FSTL3O95633 263 aa9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 COX7BP24311 80 aa9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 LMO4P61968 165 aa9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 SVIPQ8NHG7 77 aa9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 KLK12Q9UKR0 248 aa9.18□□□□□ -0.94
CSPG4P13-202ENST00000567704 LINC00526Q96FQ7 95 aa9.17□□□□□ -0.94
CSPG4P13-202ENST00000567704 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
CSPG4P13-202ENST00000567704 TLN1Q9Y490 2541 aaKnown RBP9.17□□□□□ -0.94
CSPG4P13-202ENST00000567704 ABCA2Q9BZC7 2435 aa9.17□□□□□ -0.94
CSPG4P13-202ENST00000567704 A0A087WVE0 104 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 DSCAMO60469 2012 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 DEFB4AO15263 64 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 HIVEP3Q5T1R4 2406 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 SMIM11BQ8TCY0 68 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 IGLV2-18A0A075B6J9 118 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 TMEM89A2RUT3 159 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 CLPSL1A2RUU4 121 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 KLLNB2CW77 178 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 FAM19A5Q7Z5A7 132 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 UBE2D4Q9Y2X8 147 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 V9GYY9 64 aa9.16□□□□□ -0.94
CSPG4P13-202ENST00000567704 FAM222AQ5U5X8 452 aa9.15□□□□□ -0.94
CSPG4P13-202ENST00000567704 PRM2P04554 102 aa9.15□□□□□ -0.94
CSPG4P13-202ENST00000567704 SHISA2Q6UWI4 295 aa9.15□□□□□ -0.94
CSPG4P13-202ENST00000567704 Q8NA96 180 aa9.15□□□□□ -0.94
CSPG4P13-202ENST00000567704 ZNF580Q9UK33 172 aa9.15□□□□□ -0.94
CSPG4P13-202ENST00000567704 LOC107984640A0A0U1RRK4 108 aa9.15□□□□□ -0.95
CSPG4P13-202ENST00000567704 NRGNQ92686 78 aa9.15□□□□□ -0.95
CSPG4P13-202ENST00000567704 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
CSPG4P13-202ENST00000567704 Q6JHZ5 121 aa9.14□□□□□ -0.95
CSPG4P13-202ENST00000567704 PSMG3-AS1Q96PY0 264 aa9.14□□□□□ -0.95
CSPG4P13-202ENST00000567704 Q8N6K4 173 aa9.14□□□□□ -0.95
CSPG4P13-202ENST00000567704 ADAMTSL4-AS1Q5T5F5 129 aa9.13□□□□□ -0.95
CSPG4P13-202ENST00000567704 FBXL19-AS1Q494R0 122 aa9.13□□□□□ -0.95
CSPG4P13-202ENST00000567704 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
CSPG4P13-202ENST00000567704 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
CSPG4P13-202ENST00000567704 PRO0255Q9UI72 69 aa9.13□□□□□ -0.95
CSPG4P13-202ENST00000567704 NAV2Q8IVL1 2488 aa9.13□□□□□ -0.95
CSPG4P13-202ENST00000567704 CPAMD8Q8IZJ3 1885 aa9.13□□□□□ -0.95
CSPG4P13-202ENST00000567704 SMCPP49901 116 aaPredicted RBP9.12□□□□□ -0.95
CSPG4P13-202ENST00000567704 C10orf99Q6UWK7 81 aa9.12□□□□□ -0.95
CSPG4P13-202ENST00000567704 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
CSPG4P13-202ENST00000567704 HIVEP2P31629 2446 aa9.11□□□□□ -0.95
CSPG4P13-202ENST00000567704 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
CSPG4P13-202ENST00000567704 CEP350Q5VT06 3117 aa9.11□□□□□ -0.95
CSPG4P13-202ENST00000567704 RMI2Q96E14 147 aa9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 SETD2Q9BYW2 2564 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 Q6ZQY7 126 aa9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 CHCHD10Q8WYQ3 142 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 XAGE1AQ9HD64 81 aa9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 TET2Q6N021 2002 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 REG3AQ06141 175 aa9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 PRRC2AP48634 2157 aaKnown RBP9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 DEFB135Q30KP9 77 aa9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 PRO0461Q9UI25 63 aa9.1□□□□□ -0.95
CSPG4P13-202ENST00000567704 NDUFC1O43677 76 aa9.09□□□□□ -0.95
CSPG4P13-202ENST00000567704 C4orf3Q8WVX3 66 aa9.09□□□□□ -0.95
CSPG4P13-202ENST00000567704 CCL18P55774 89 aa9.09□□□□□ -0.95
CSPG4P13-202ENST00000567704 TRBV6-8A0A0A6YYG3 113 aa9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 NDUFB1O75438 58 aa9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 SMIM26A0A096LP01 95 aa9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 F8W735 103 aaPredicted RBP9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 TNFRSF13BO14836 293 aaPredicted RBP9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 CCKP06307 115 aa9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 LINC00242Q5T6M2 205 aa9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
CSPG4P13-202ENST00000567704 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
CSPG4P13-202ENST00000567704 IGF2RP11717 2491 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms