RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 PGLYRP4Q96LB8 373 aa5.88□□□□□ -1.47
CDH13-210ENST00000567445 DPH3P1Q9H4G8 78 aa5.88□□□□□ -1.47
CDH13-210ENST00000567445 NIT2Q9NQR4 276 aa5.88□□□□□ -1.47
CDH13-210ENST00000567445 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
CDH13-210ENST00000567445 IGLV4-60A0A075B6I1 120 aa5.87□□□□□ -1.47
CDH13-210ENST00000567445 PDE6DO43924 150 aa5.87□□□□□ -1.47
CDH13-210ENST00000567445 NTF3P20783 257 aa5.87□□□□□ -1.47
CDH13-210ENST00000567445 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
CDH13-210ENST00000567445 PAPPA-AS1Q5QFB9 102 aa5.87□□□□□ -1.47
CDH13-210ENST00000567445 GFRA4Q9GZZ7 299 aa5.87□□□□□ -1.47
CDH13-210ENST00000567445 BIN3Q9NQY0 253 aa5.87□□□□□ -1.47
CDH13-210ENST00000567445 TRBV20OR9-2A0A075B6H5 130 aa5.86□□□□□ -1.47
CDH13-210ENST00000567445 IGHV3-64A0A075B6Q5 118 aa5.86□□□□□ -1.47
CDH13-210ENST00000567445 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.86□□□□□ -1.47
CDH13-210ENST00000567445 UBE2L6O14933 153 aa5.86□□□□□ -1.47
CDH13-210ENST00000567445 C9orf62Q8N4C0 152 aa5.86□□□□□ -1.47
CDH13-210ENST00000567445 MED9Q9NWA0 146 aa5.86□□□□□ -1.47
CDH13-210ENST00000567445 CTRLP40313 264 aa5.85□□□□□ -1.47
CDH13-210ENST00000567445 AMTP48728 403 aa5.85□□□□□ -1.47
CDH13-210ENST00000567445 SULT1A2P50226 295 aa5.85□□□□□ -1.47
CDH13-210ENST00000567445 COTL1Q14019 142 aa5.85□□□□□ -1.47
CDH13-210ENST00000567445 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
CDH13-210ENST00000567445 CNFNQ9BYD5 112 aa5.85□□□□□ -1.47
CDH13-210ENST00000567445 UBR4Q5T4S7 5183 aa5.85□□□□□ -1.47
CDH13-210ENST00000567445 BCL2P10415 239 aa5.84□□□□□ -1.47
CDH13-210ENST00000567445 TWIST1Q15672 202 aa5.84□□□□□ -1.47
CDH13-210ENST00000567445 DPH3Q96FX2 82 aa5.84□□□□□ -1.47
CDH13-210ENST00000567445 RNF185Q96GF1 192 aa5.84□□□□□ -1.47
CDH13-210ENST00000567445 FOXI1Q12951 378 aa5.83□□□□□ -1.48
CDH13-210ENST00000567445 GATD1Q8NB37 220 aa5.83□□□□□ -1.48
CDH13-210ENST00000567445 SPACA4Q8TDM5 124 aa5.83□□□□□ -1.48
CDH13-210ENST00000567445 RPP21Q9H633 154 aaKnown RBP5.83□□□□□ -1.48
CDH13-210ENST00000567445 A0A087WYN8 130 aa5.83□□□□□ -1.48
CDH13-210ENST00000567445 TRAV26-2A0A0B4J265 109 aa5.83□□□□□ -1.48
CDH13-210ENST00000567445 CHTF8P0CG12 524 aa5.83□□□□□ -1.48
CDH13-210ENST00000567445 Q6ZRU5 148 aa5.83□□□□□ -1.48
CDH13-210ENST00000567445 C15orf56Q8N910 161 aa5.83□□□□□ -1.48
CDH13-210ENST00000567445 IGKV3OR2-268A0A0C4DH90 116 aa5.82□□□□□ -1.48
CDH13-210ENST00000567445 K7EN84 100 aa5.82□□□□□ -1.48
CDH13-210ENST00000567445 NCR2O95944 276 aa5.82□□□□□ -1.48
CDH13-210ENST00000567445 AMMECR1LQ6DCA0 310 aa5.82□□□□□ -1.48
CDH13-210ENST00000567445 SLC51BQ86UW2 128 aa5.82□□□□□ -1.48
CDH13-210ENST00000567445 RNASE7Q9H1E1 156 aaKnown RBP5.82□□□□□ -1.48
CDH13-210ENST00000567445 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
CDH13-210ENST00000567445 H7C423 109 aa5.81□□□□□ -1.48
CDH13-210ENST00000567445 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
CDH13-210ENST00000567445 RPS10P46783 165 aaKnown RBP5.81□□□□□ -1.48
CDH13-210ENST00000567445 SEC61GP60059 68 aa5.81□□□□□ -1.48
CDH13-210ENST00000567445 TEX261Q6UWH6 196 aa5.81□□□□□ -1.48
CDH13-210ENST00000567445 SMIM15Q7Z3B0 74 aa5.81□□□□□ -1.48
CDH13-210ENST00000567445 TCTE3Q8IZS6 198 aa5.81□□□□□ -1.48
CDH13-210ENST00000567445 GTSF1Q8WW33 167 aa5.81□□□□□ -1.48
CDH13-210ENST00000567445 CHCHD10Q8WYQ3 142 aaPredicted RBP5.81□□□□□ -1.48
CDH13-210ENST00000567445 RPL39LQ96EH5 51 aaKnown RBP5.81□□□□□ -1.48
CDH13-210ENST00000567445 APCSP02743 223 aa5.8□□□□□ -1.48
CDH13-210ENST00000567445 FOXA3P55318 350 aaPredicted RBP5.8□□□□□ -1.48
CDH13-210ENST00000567445 COX6A2Q02221 97 aa5.8□□□□□ -1.48
CDH13-210ENST00000567445 HIGD2BQ4VC39 106 aa5.8□□□□□ -1.48
CDH13-210ENST00000567445 RNASEKQ6P5S7 137 aaKnown RBP5.8□□□□□ -1.48
CDH13-210ENST00000567445 C7orf33Q8WU49 177 aa5.8□□□□□ -1.48
CDH13-210ENST00000567445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.79□□□□□ -1.48
CDH13-210ENST00000567445 GVQW2A0A096LPI5 108 aaPredicted RBP5.79□□□□□ -1.48
CDH13-210ENST00000567445 IGKV2-29A2NJV5 120 aaPredicted RBP5.79□□□□□ -1.48
CDH13-210ENST00000567445 SDHAF1A6NFY7 115 aa5.79□□□□□ -1.48
CDH13-210ENST00000567445 NDUFS6O75380 124 aaKnown RBP5.79□□□□□ -1.48
CDH13-210ENST00000567445 FGF6P10767 208 aa5.79□□□□□ -1.48
CDH13-210ENST00000567445 IGKV2-24A0A0C4DH68 120 aa5.78□□□□□ -1.48
CDH13-210ENST00000567445 TMEM250H0YL14 139 aa5.78□□□□□ -1.48
CDH13-210ENST00000567445 I3L3M4 83 aa5.78□□□□□ -1.48
CDH13-210ENST00000567445 PHOX2AO14813 284 aa5.78□□□□□ -1.48
CDH13-210ENST00000567445 ZNF25P17030 456 aaPredicted RBP5.78□□□□□ -1.48
CDH13-210ENST00000567445 PRSS3P2Q8NHM4 247 aa5.78□□□□□ -1.48
CDH13-210ENST00000567445 TRBV6-5A0A0K0K1A5 114 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 FAM231BA6NCW3 169 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 A8MWL6 223 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 GATCO43716 136 aaKnown RBP5.77□□□□□ -1.49
CDH13-210ENST00000567445 FAM231DQ6ZW35 169 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 OR5A1Q8NGJ0 315 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 TMEM101Q96IK0 257 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 BTF3L4Q96K17 158 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 A0A1B0GVG6 124 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 PMCHP20382 165 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 XCL1P47992 114 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 STPG4Q8N801 248 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 FAM210AQ96ND0 272 aa5.77□□□□□ -1.49
CDH13-210ENST00000567445 A0A096LNI7 61 aa5.76□□□□□ -1.49
CDH13-210ENST00000567445 LINC00959A0A1B0GUT2 108 aa5.76□□□□□ -1.49
CDH13-210ENST00000567445 TSHBP01222 138 aa5.76□□□□□ -1.49
CDH13-210ENST00000567445 ESDP10768 282 aa5.76□□□□□ -1.49
CDH13-210ENST00000567445 PRR3P79522 188 aaKnown RBP5.76□□□□□ -1.49
CDH13-210ENST00000567445 BORCS7Q96B45 105 aa5.76□□□□□ -1.49
CDH13-210ENST00000567445 ST20Q9HBF5 79 aa5.76□□□□□ -1.49
CDH13-210ENST00000567445 LINC00474Q9P2X8 69 aa5.76□□□□□ -1.49
CDH13-210ENST00000567445 PKIGQ9Y2B9 76 aa5.76□□□□□ -1.49
CDH13-210ENST00000567445 TNXBP22105 4242 aa5.75□□□□□ -1.49
CDH13-210ENST00000567445 IGHV1-58A0A0C4DH39 117 aa5.75□□□□□ -1.49
CDH13-210ENST00000567445 CCL25O15444 150 aa5.75□□□□□ -1.49
CDH13-210ENST00000567445 GAS8-AS1O95177 125 aa5.75□□□□□ -1.49
CDH13-210ENST00000567445 ALKAL2Q6UX46 152 aa5.75□□□□□ -1.49
CDH13-210ENST00000567445 MRPL52Q86TS9 123 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms