RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 COL4A2P08572 1712 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 C9orf85Q96MD7 179 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 UBE2D1P51668 147 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 LINC01620Q4KN68 170 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 WFDC10AQ9H1F0 79 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 IGF2RP11717 2491 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 TRBV27A0A0K0K1C4 114 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 RBX1P62877 108 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 FAM19A1Q7Z5A9 133 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 CLUHP3Q96NS8 147 aa4.79□□□□□ -1.64
LINC01043-201ENST00000565936 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.78□□□□□ -1.64
LINC01043-201ENST00000565936 M0R2N4 97 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 ODF3L2Q3SX64 289 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 SONP18583 2426 aaKnown RBP4.78□□□□□ -1.64
LINC01043-201ENST00000565936 EP400Q96L91 3159 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 EML5Q05BV3 1969 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 NDUFC2O95298 119 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 Q8N2B8 174 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 CEMP1Q6PRD7 247 aaPredicted RBP4.78□□□□□ -1.64
LINC01043-201ENST00000565936 HIGD2AQ9BW72 106 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 PROK1P58294 105 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 SPATA12Q7Z6I5 190 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
LINC01043-201ENST00000565936 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
LINC01043-201ENST00000565936 SPANXB1Q9NS25 103 aaPredicted RBP4.78□□□□□ -1.64
LINC01043-201ENST00000565936 A0A0J9YXY3 114 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 ATG2AQ2TAZ0 1938 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 HIVEP3Q5T1R4 2406 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 PRR14LQ5THK1 2151 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 RNASE3P12724 160 aaKnown RBP4.77□□□□□ -1.65
LINC01043-201ENST00000565936 ANKRD39Q53RE8 183 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 DAND5Q8N907 189 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 B5MCH6 92 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 CRIP1P50238 77 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 MP68P56378 58 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 C14orf132Q9NPU4 83 aa4.77□□□□□ -1.65
LINC01043-201ENST00000565936 LECT2O14960 151 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 F8WDY8 70 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 HIST2H2BDQ6DRA6 164 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 LINC00173Q6ZV60 143 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 LRCOL1A6NCL2 159 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 IGLV2-11P01706 119 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 COX17Q14061 63 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 TNRC6BQ9UPQ9 1833 aaKnown RBP4.76□□□□□ -1.65
LINC01043-201ENST00000565936 CDKN2A-AS1Q9UH64 79 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 UBE2D3P61077 147 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 UBE2D2P62837 147 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 FAM19A5Q7Z5A7 132 aaPredicted RBP4.76□□□□□ -1.65
LINC01043-201ENST00000565936 HCFC1P51610 2035 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 A0A0B4J2C4 111 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 IGKV3D-7A0A0C4DH55 119 aa4.76□□□□□ -1.65
LINC01043-201ENST00000565936 LINC00959A0A1B0GUT2 108 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 TMEM223A0PJW6 202 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 A0A1B0GX51 115 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 WNK1Q9H4A3 2382 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 EXPH5Q8NEV8 1989 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 M0R378 163 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 SVIPQ8NHG7 77 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 DHRS4-AS1Q9P1J3 65 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 H3BT86 120 aa4.75□□□□□ -1.65
LINC01043-201ENST00000565936 CCDC168Q8NDH2 2452 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
LINC01043-201ENST00000565936 C1orf134Q5TEV5 83 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 RNF185Q96GF1 192 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 TSHBP01222 138 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 TIMM17BO60830 172 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 SEC61GP60059 68 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 PTH2Q96A98 100 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 H0Y9J4 135 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 ATOX1O00244 68 aa4.74□□□□□ -1.65
LINC01043-201ENST00000565936 FSHBP01225 129 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 TRBV10-2A0A0K0K1G8 114 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 PRR9Q5T870 116 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 RETNQ9HD89 108 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 UBE2D4Q9Y2X8 147 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 IGLV5-52A0A0A0MRZ9 124 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 TRBV30A0A0K0K1B3 111 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 Q8IZM0 81 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 NUPR1O60356 82 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 LOC100131303A0A0U1RQF7 123 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 FAM236AA0A1B0GUQ0 79 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 FAM236BA0A1B0GV22 79 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 CNFNQ9BYD5 112 aa4.73□□□□□ -1.65
LINC01043-201ENST00000565936 J3KT08 172 aa4.72□□□□□ -1.65
LINC01043-201ENST00000565936 POLR2KP53803 58 aaKnown RBP4.72□□□□□ -1.65
LINC01043-201ENST00000565936 SMIM20Q8N5G0 67 aa4.72□□□□□ -1.65
LINC01043-201ENST00000565936 IGKV2D-26A0A0A0MRZ7 120 aa4.72□□□□□ -1.65
LINC01043-201ENST00000565936 MRPS12O15235 138 aaKnown RBP4.72□□□□□ -1.65
LINC01043-201ENST00000565936 Q6ZTC4 211 aa4.72□□□□□ -1.65
LINC01043-201ENST00000565936 TRAV23DV6A0A075B6W5 121 aa4.72□□□□□ -1.65
LINC01043-201ENST00000565936 FHL3Q13643 280 aa4.72□□□□□ -1.65
LINC01043-201ENST00000565936 PTPRBP23467 1997 aa4.72□□□□□ -1.65
LINC01043-201ENST00000565936 RPL28P46779 137 aaKnown RBP4.71□□□□□ -1.65
LINC01043-201ENST00000565936 C1orf158Q8N1D5 194 aa4.71□□□□□ -1.65
LINC01043-201ENST00000565936 NRACQ8N912 160 aa4.71□□□□□ -1.65
LINC01043-201ENST00000565936 RNASE8Q8TDE3 154 aaKnown RBP4.71□□□□□ -1.65
LINC01043-201ENST00000565936 XAGE1AQ9HD64 81 aa4.71□□□□□ -1.66
LINC01043-201ENST00000565936 CDC42SE2Q9NRR3 84 aa4.71□□□□□ -1.66
LINC01043-201ENST00000565936 EGFEM1PQ0D2K5 195 aa4.71□□□□□ -1.66
LINC01043-201ENST00000565936 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms