RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 WFDC10AQ9H1F0 79 aa12.92□□□□□ -0.34
GDE1-203ENST00000564172 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
GDE1-203ENST00000564172 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
GDE1-203ENST00000564172 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
GDE1-203ENST00000564172 S100A4P26447 101 aaKnown RBP12.9□□□□□ -0.34
GDE1-203ENST00000564172 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
GDE1-203ENST00000564172 GAGE2AQ6NT46 116 aa12.9□□□□□ -0.34
GDE1-203ENST00000564172 MRPL35Q9NZE8 188 aaKnown RBP12.9□□□□□ -0.34
GDE1-203ENST00000564172 AMN1Q8IY45 258 aa12.9□□□□□ -0.34
GDE1-203ENST00000564172 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
GDE1-203ENST00000564172 CKS2P33552 79 aa12.89□□□□□ -0.35
GDE1-203ENST00000564172 IGHV1OR15-1A0A075B7D0 117 aa12.89□□□□□ -0.35
GDE1-203ENST00000564172 P0DMU3 169 aa12.89□□□□□ -0.35
GDE1-203ENST00000564172 FAM231AP0DMU4 169 aa12.89□□□□□ -0.35
GDE1-203ENST00000564172 FAM231CP0DMU5 169 aa12.89□□□□□ -0.35
GDE1-203ENST00000564172 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
GDE1-203ENST00000564172 COX7CP15954 63 aa12.89□□□□□ -0.35
GDE1-203ENST00000564172 FAM236AA0A1B0GUQ0 79 aa12.88□□□□□ -0.35
GDE1-203ENST00000564172 FAM236BA0A1B0GV22 79 aa12.88□□□□□ -0.35
GDE1-203ENST00000564172 MED14OSP0DP75 135 aa12.88□□□□□ -0.35
GDE1-203ENST00000564172 DEFB121Q5J5C9 76 aa12.88□□□□□ -0.35
GDE1-203ENST00000564172 PRO0628Q9UI54 55 aa12.88□□□□□ -0.35
GDE1-203ENST00000564172 STAB1Q9NY15 2570 aa12.88□□□□□ -0.35
GDE1-203ENST00000564172 TRGV11A0A075B6L2 103 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 IGHV4-4A0A075B6R2 117 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 TRAV12-1A0A0B4J245 112 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 SPRY2O43597 315 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 TMEM258P61165 79 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 SPANXN1Q5VSR9 72 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 SFTA2Q6UW10 78 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 UBE2WQ96B02 151 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 DPH3Q96FX2 82 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 SRSF9Q13242 221 aaKnown RBP eCLIP12.86□□□□□ -0.35
GDE1-203ENST00000564172 PMVKQ15126 192 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 PRO1854Q9UHT4 67 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 PHLDA3Q9Y5J5 127 aa12.86□□□□□ -0.35
GDE1-203ENST00000564172 MALP21145 153 aa12.85□□□□□ -0.35
GDE1-203ENST00000564172 ZNF56Q15929 161 aa12.85□□□□□ -0.35
GDE1-203ENST00000564172 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
GDE1-203ENST00000564172 COL6A5A8TX70 2615 aa12.85□□□□□ -0.35
GDE1-203ENST00000564172 IGHV3-16A0A0C4DH30 117 aa12.85□□□□□ -0.35
GDE1-203ENST00000564172 TRBV10-2A0A0K0K1G8 114 aa12.85□□□□□ -0.35
GDE1-203ENST00000564172 INSP01308 110 aa12.85□□□□□ -0.35
GDE1-203ENST00000564172 Q5XG85 94 aa12.84□□□□□ -0.35
GDE1-203ENST00000564172 H7C1H1 209 aa12.84□□□□□ -0.35
GDE1-203ENST00000564172 ACYP1P07311 99 aa12.84□□□□□ -0.35
GDE1-203ENST00000564172 ATXN8Q156A1 80 aa12.84□□□□□ -0.35
GDE1-203ENST00000564172 KLK5Q9Y337 293 aaPredicted RBP12.84□□□□□ -0.35
GDE1-203ENST00000564172 TEX49A0A1B0GTD5 131 aa12.83□□□□□ -0.36
GDE1-203ENST00000564172 F8VRH5 84 aa12.83□□□□□ -0.36
GDE1-203ENST00000564172 M0R381 172 aa12.83□□□□□ -0.36
GDE1-203ENST00000564172 CFC1BP0CG36 223 aa12.83□□□□□ -0.36
GDE1-203ENST00000564172 CFC1P0CG37 223 aa12.83□□□□□ -0.36
GDE1-203ENST00000564172 HTN1P15515 57 aa12.83□□□□□ -0.36
GDE1-203ENST00000564172 RPL35AP18077 110 aaKnown RBP12.83□□□□□ -0.36
GDE1-203ENST00000564172 LINC01620Q4KN68 170 aa12.83□□□□□ -0.36
GDE1-203ENST00000564172 GIG44P09565 113 aaPredicted RBP12.82□□□□□ -0.36
GDE1-203ENST00000564172 C9orf85Q96MD7 179 aa12.82□□□□□ -0.36
GDE1-203ENST00000564172 C4orf26Q17RF5 130 aa12.82□□□□□ -0.36
GDE1-203ENST00000564172 Q8N8P6 123 aa12.82□□□□□ -0.36
GDE1-203ENST00000564172 TRACP01848 142 aa12.81□□□□□ -0.36
GDE1-203ENST00000564172 PRM2P04554 102 aa12.81□□□□□ -0.36
GDE1-203ENST00000564172 C1orf158Q8N1D5 194 aa12.81□□□□□ -0.36
GDE1-203ENST00000564172 SEC61GP60059 68 aa12.81□□□□□ -0.36
GDE1-203ENST00000564172 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
GDE1-203ENST00000564172 MUC4Q99102 2169 aa12.81□□□□□ -0.36
GDE1-203ENST00000564172 NXPH4O95158 308 aa12.8□□□□□ -0.36
GDE1-203ENST00000564172 HRCT1Q6UXD1 115 aa12.8□□□□□ -0.36
GDE1-203ENST00000564172 RNF185Q96GF1 192 aa12.8□□□□□ -0.36
GDE1-203ENST00000564172 CXCL5P42830 114 aa12.8□□□□□ -0.36
GDE1-203ENST00000564172 SCGB1D4Q6XE38 83 aa12.8□□□□□ -0.36
GDE1-203ENST00000564172 C2orf48Q96LS8 159 aa12.8□□□□□ -0.36
GDE1-203ENST00000564172 ZNF815PA8K554 130 aa12.78□□□□□ -0.36
GDE1-203ENST00000564172 H3BT86 120 aa12.78□□□□□ -0.36
GDE1-203ENST00000564172 OXLD1Q5BKU9 147 aa12.78□□□□□ -0.36
GDE1-203ENST00000564172 TINCRA0A1B0GVN0 87 aa12.78□□□□□ -0.36
GDE1-203ENST00000564172 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.36
GDE1-203ENST00000564172 SMKR1H3BMG3 65 aa12.77□□□□□ -0.36
GDE1-203ENST00000564172 IGLV2-18A0A075B6J9 118 aa12.77□□□□□ -0.37
GDE1-203ENST00000564172 RS1O15537 224 aa12.77□□□□□ -0.37
GDE1-203ENST00000564172 CSNK1G2-AS1Q8NCQ2 148 aa12.77□□□□□ -0.37
GDE1-203ENST00000564172 CEMP1Q6PRD7 247 aaPredicted RBP12.76□□□□□ -0.37
GDE1-203ENST00000564172 C14orf178Q8N769 122 aaPredicted RBP12.76□□□□□ -0.37
GDE1-203ENST00000564172 JPT2Q9H910 190 aa12.76□□□□□ -0.37
GDE1-203ENST00000564172 IGHV3-30P01768 117 aa12.76□□□□□ -0.37
GDE1-203ENST00000564172 IGHV3-30-5P0DP03 117 aa12.76□□□□□ -0.37
GDE1-203ENST00000564172 LINC00643Q86TS7 51 aa12.76□□□□□ -0.37
GDE1-203ENST00000564172 IGHV3-33P01772 117 aa12.75□□□□□ -0.37
GDE1-203ENST00000564172 C11orf72Q8NBR9 251 aa12.75□□□□□ -0.37
GDE1-203ENST00000564172 A0A0J9YY99 117 aa12.74□□□□□ -0.37
GDE1-203ENST00000564172 ZNF415Q09FC8 603 aa12.74□□□□□ -0.37
GDE1-203ENST00000564172 LAGE3Q14657 143 aa12.74□□□□□ -0.37
GDE1-203ENST00000564172 ZNF876PQ49A33 203 aa12.74□□□□□ -0.37
GDE1-203ENST00000564172 DPH3P1Q9H4G8 78 aa12.74□□□□□ -0.37
GDE1-203ENST00000564172 GAS8-AS1O95177 125 aa12.74□□□□□ -0.37
GDE1-203ENST00000564172 PLEKHB2Q96CS7 222 aa12.74□□□□□ -0.37
GDE1-203ENST00000564172 A0A0B4J2C4 111 aa12.73□□□□□ -0.37
GDE1-203ENST00000564172 ATOX1O00244 68 aa12.73□□□□□ -0.37
GDE1-203ENST00000564172 C5orf38Q86SI9 138 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms