RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SLURP1P55000 103 aa8.68□□□□□ -1.02
ABCA3-203ENST00000563623 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
ABCA3-203ENST00000563623 NDUFA7O95182 113 aa8.67□□□□□ -1.02
ABCA3-203ENST00000563623 ZNF462Q96JM2 2506 aa8.67□□□□□ -1.02
ABCA3-203ENST00000563623 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
ABCA3-203ENST00000563623 TRAV13-1A0A0B4J241 112 aa8.67□□□□□ -1.02
ABCA3-203ENST00000563623 TRBV10-2A0A0K0K1G8 114 aa8.67□□□□□ -1.02
ABCA3-203ENST00000563623 PSMB8P28062 276 aa8.67□□□□□ -1.02
ABCA3-203ENST00000563623 IGKV3OR2-268A0A0C4DH90 116 aa8.66□□□□□ -1.02
ABCA3-203ENST00000563623 CIRBPQ14011 172 aaKnown RBP8.66□□□□□ -1.02
ABCA3-203ENST00000563623 UBE2E2Q96LR5 201 aa8.66□□□□□ -1.02
ABCA3-203ENST00000563623 ZNF415Q09FC8 603 aa8.66□□□□□ -1.02
ABCA3-203ENST00000563623 SBSPONQ8IVN8 264 aa8.66□□□□□ -1.02
ABCA3-203ENST00000563623 C11orf44Q8N8P7 122 aa8.66□□□□□ -1.02
ABCA3-203ENST00000563623 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
ABCA3-203ENST00000563623 XCL2Q9UBD3 114 aa8.66□□□□□ -1.02
ABCA3-203ENST00000563623 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
ABCA3-203ENST00000563623 RS1O15537 224 aa8.65□□□□□ -1.02
ABCA3-203ENST00000563623 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.02
ABCA3-203ENST00000563623 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.02
ABCA3-203ENST00000563623 RBMY1FQ15415 496 aaKnown RBP8.65□□□□□ -1.02
ABCA3-203ENST00000563623 Q6ZSN1 163 aa8.65□□□□□ -1.02
ABCA3-203ENST00000563623 NAV2Q8IVL1 2488 aa8.65□□□□□ -1.02
ABCA3-203ENST00000563623 JMJD1CQ15652 2540 aa8.65□□□□□ -1.02
ABCA3-203ENST00000563623 C18orf65Q6ZTR6 163 aa8.65□□□□□ -1.03
ABCA3-203ENST00000563623 VSIG2Q96IQ7 327 aa8.64□□□□□ -1.03
ABCA3-203ENST00000563623 MIAQ16674 131 aa8.64□□□□□ -1.03
ABCA3-203ENST00000563623 ODF3Q96PU9 254 aa8.64□□□□□ -1.03
ABCA3-203ENST00000563623 ANKRD17O75179 2603 aaKnown RBP8.64□□□□□ -1.03
ABCA3-203ENST00000563623 TRBV30A0A0K0K1B3 111 aa8.63□□□□□ -1.03
ABCA3-203ENST00000563623 Q9H8V8 135 aa8.63□□□□□ -1.03
ABCA3-203ENST00000563623 TRGV1A0A0A0MS02 117 aa8.63□□□□□ -1.03
ABCA3-203ENST00000563623 H7C423 109 aa8.63□□□□□ -1.03
ABCA3-203ENST00000563623 MRPS36P82909 103 aaKnown RBP8.63□□□□□ -1.03
ABCA3-203ENST00000563623 CFHR3Q02985 330 aa8.63□□□□□ -1.03
ABCA3-203ENST00000563623 C3orf22Q8N5N4 141 aa8.62□□□□□ -1.03
ABCA3-203ENST00000563623 hADV29S1A0JD25 119 aa8.62□□□□□ -1.03
ABCA3-203ENST00000563623 C4orf26Q17RF5 130 aa8.62□□□□□ -1.03
ABCA3-203ENST00000563623 TMEM61Q8N0U2 210 aa8.62□□□□□ -1.03
ABCA3-203ENST00000563623 TRACP01848 142 aa8.62□□□□□ -1.03
ABCA3-203ENST00000563623 PRIMA1Q86XR5 153 aa8.62□□□□□ -1.03
ABCA3-203ENST00000563623 TOMM7Q9P0U1 55 aa8.62□□□□□ -1.03
ABCA3-203ENST00000563623 FLNBO75369 2602 aaKnown RBP8.62□□□□□ -1.03
ABCA3-203ENST00000563623 A0A1W2PRX2 142 aa8.61□□□□□ -1.03
ABCA3-203ENST00000563623 Q6Q795 121 aa8.61□□□□□ -1.03
ABCA3-203ENST00000563623 LRRC75A-AS1Q8N1F1 130 aa8.61□□□□□ -1.03
ABCA3-203ENST00000563623 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
ABCA3-203ENST00000563623 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
ABCA3-203ENST00000563623 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
ABCA3-203ENST00000563623 LITAFQ99732 161 aa8.6□□□□□ -1.03
ABCA3-203ENST00000563623 CHCHD7Q9BUK0 85 aa8.6□□□□□ -1.03
ABCA3-203ENST00000563623 DOPEY1Q5JWR5 2465 aa8.6□□□□□ -1.03
ABCA3-203ENST00000563623 UQCRQO14949 82 aa8.59□□□□□ -1.03
ABCA3-203ENST00000563623 LINC01356Q8N9X3 169 aa8.59□□□□□ -1.03
ABCA3-203ENST00000563623 MTORP42345 2549 aa8.59□□□□□ -1.03
ABCA3-203ENST00000563623 ZANQ9Y493 2812 aa8.59□□□□□ -1.03
ABCA3-203ENST00000563623 DSCR8Q96T75 97 aa8.59□□□□□ -1.03
ABCA3-203ENST00000563623 FLNCQ14315 2725 aa8.59□□□□□ -1.03
ABCA3-203ENST00000563623 FN1P02751 2386 aaKnown RBP8.59□□□□□ -1.04
ABCA3-203ENST00000563623 RBMY1BA6NDE4 496 aaKnown RBP8.59□□□□□ -1.04
ABCA3-203ENST00000563623 RBMY1EA6NEQ0 496 aaKnown RBP8.59□□□□□ -1.04
ABCA3-203ENST00000563623 RBMY1DP0C7P1 496 aaKnown RBP8.59□□□□□ -1.04
ABCA3-203ENST00000563623 SPANXDQ9BXN6 97 aa8.58□□□□□ -1.04
ABCA3-203ENST00000563623 SPANXCQ9NY87 97 aa8.58□□□□□ -1.04
ABCA3-203ENST00000563623 H3BT86 120 aa8.58□□□□□ -1.04
ABCA3-203ENST00000563623 INSP01308 110 aa8.58□□□□□ -1.04
ABCA3-203ENST00000563623 COX6A2Q02221 97 aa8.58□□□□□ -1.04
ABCA3-203ENST00000563623 RNF152Q8N8N0 203 aa8.57□□□□□ -1.04
ABCA3-203ENST00000563623 UBE2L6O14933 153 aa8.57□□□□□ -1.04
ABCA3-203ENST00000563623 STHQ8IWL8 128 aa8.57□□□□□ -1.04
ABCA3-203ENST00000563623 PEMTQ9UBM1 199 aa8.57□□□□□ -1.04
ABCA3-203ENST00000563623 ACANP16112 2415 aa8.57□□□□□ -1.04
ABCA3-203ENST00000563623 CRYBG3Q68DQ2 2970 aa8.56□□□□□ -1.04
ABCA3-203ENST00000563623 LST1O00453 97 aa8.56□□□□□ -1.04
ABCA3-203ENST00000563623 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
ABCA3-203ENST00000563623 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
ABCA3-203ENST00000563623 KIR2DL5BQ8NHK3 375 aa8.56□□□□□ -1.04
ABCA3-203ENST00000563623 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
ABCA3-203ENST00000563623 ZFHX3Q15911 3703 aa8.56□□□□□ -1.04
ABCA3-203ENST00000563623 FAM104AQ969W3 186 aa8.55□□□□□ -1.04
ABCA3-203ENST00000563623 MAP6D1Q9H9H5 199 aa8.55□□□□□ -1.04
ABCA3-203ENST00000563623 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.55□□□□□ -1.04
ABCA3-203ENST00000563623 A0A0U1RQV1 116 aa8.54□□□□□ -1.04
ABCA3-203ENST00000563623 PIK3CD-AS1Q5SR53 167 aa8.54□□□□□ -1.04
ABCA3-203ENST00000563623 TMEM89A2RUT3 159 aa8.54□□□□□ -1.04
ABCA3-203ENST00000563623 ITPR1Q14643 2758 aa8.54□□□□□ -1.04
ABCA3-203ENST00000563623 NDUFA1O15239 70 aa8.54□□□□□ -1.04
ABCA3-203ENST00000563623 ZNF702PQ9H963 129 aa8.54□□□□□ -1.04
ABCA3-203ENST00000563623 TRGV2A0A075B6R0 118 aa8.53□□□□□ -1.04
ABCA3-203ENST00000563623 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
ABCA3-203ENST00000563623 RPL35AP18077 110 aaKnown RBP8.53□□□□□ -1.04
ABCA3-203ENST00000563623 C11orf68Q9H3H3 251 aaKnown RBP8.53□□□□□ -1.04
ABCA3-203ENST00000563623 J3QLI3 93 aa8.53□□□□□ -1.04
ABCA3-203ENST00000563623 Q9HAA7 133 aa8.53□□□□□ -1.04
ABCA3-203ENST00000563623 LINC00158P58513 81 aa8.53□□□□□ -1.04
ABCA3-203ENST00000563623 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
ABCA3-203ENST00000563623 Q6ZTI0 123 aa8.53□□□□□ -1.04
ABCA3-203ENST00000563623 UTP20O75691 2785 aaKnown RBP8.52□□□□□ -1.05
ABCA3-203ENST00000563623 CELSR2Q9HCU4 2923 aa8.52□□□□□ -1.05
ABCA3-203ENST00000563623 WIPF1O43516 503 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms