RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 DEFB130BP0DP73 79 aa13.52□□□□□ -0.24
SMPD3-203ENST00000563226 DEFB130AP0DP74 79 aa13.52□□□□□ -0.24
SMPD3-203ENST00000563226 NHP2Q9NX24 153 aaKnown RBP13.52□□□□□ -0.24
SMPD3-203ENST00000563226 C9orf118A6NHY6 69 aa13.52□□□□□ -0.25
SMPD3-203ENST00000563226 SBSPONQ8IVN8 264 aa13.52□□□□□ -0.25
SMPD3-203ENST00000563226 WFDC9Q8NEX5 89 aa13.52□□□□□ -0.25
SMPD3-203ENST00000563226 LEPROTO15243 131 aa13.51□□□□□ -0.25
SMPD3-203ENST00000563226 H3BUT2 72 aa13.51□□□□□ -0.25
SMPD3-203ENST00000563226 DEFB135Q30KP9 77 aa13.51□□□□□ -0.25
SMPD3-203ENST00000563226 TIMM21Q9BVV7 248 aa13.51□□□□□ -0.25
SMPD3-203ENST00000563226 A0A0J9YY99 117 aa13.5□□□□□ -0.25
SMPD3-203ENST00000563226 CIDEAO60543 219 aa13.5□□□□□ -0.25
SMPD3-203ENST00000563226 SMIM13P0DJ93 91 aa13.5□□□□□ -0.25
SMPD3-203ENST00000563226 LGALS3P17931 250 aaKnown RBP13.5□□□□□ -0.25
SMPD3-203ENST00000563226 LINC00612Q8N6U2 182 aa13.5□□□□□ -0.25
SMPD3-203ENST00000563226 KIR2DL5BQ8NHK3 375 aa13.5□□□□□ -0.25
SMPD3-203ENST00000563226 UBE2D1P51668 147 aa13.49□□□□□ -0.25
SMPD3-203ENST00000563226 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
SMPD3-203ENST00000563226 TINCRA0A1B0GVN0 87 aa13.49□□□□□ -0.25
SMPD3-203ENST00000563226 TRAV8-3A0A0A6YYJ7 113 aa13.48□□□□□ -0.25
SMPD3-203ENST00000563226 KRTAP24-1Q3LI83 254 aa13.48□□□□□ -0.25
SMPD3-203ENST00000563226 CMYA5Q8N3K9 4069 aa13.47□□□□□ -0.25
SMPD3-203ENST00000563226 SMIM9A6NGZ8 99 aa13.47□□□□□ -0.25
SMPD3-203ENST00000563226 DEFB4AO15263 64 aa13.46□□□□□ -0.25
SMPD3-203ENST00000563226 IGHV3-30-3P0DP02 117 aa13.46□□□□□ -0.25
SMPD3-203ENST00000563226 GTSF1LQ9H1H1 148 aa13.46□□□□□ -0.25
SMPD3-203ENST00000563226 OR5A1Q8NGJ0 315 aa13.46□□□□□ -0.26
SMPD3-203ENST00000563226 WIPF1O43516 503 aa13.45□□□□□ -0.26
SMPD3-203ENST00000563226 SPINK8P0C7L1 97 aa13.45□□□□□ -0.26
SMPD3-203ENST00000563226 APOC4P55056 127 aa13.45□□□□□ -0.26
SMPD3-203ENST00000563226 C12orf74Q32Q52 190 aa13.45□□□□□ -0.26
SMPD3-203ENST00000563226 FBN1P35555 2871 aaKnown RBP13.45□□□□□ -0.26
SMPD3-203ENST00000563226 COX6A2Q02221 97 aa13.44□□□□□ -0.26
SMPD3-203ENST00000563226 SRSF9Q13242 221 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMPD3-203ENST00000563226 FAM222AQ5U5X8 452 aa13.44□□□□□ -0.26
SMPD3-203ENST00000563226 TMEM243Q9BU79 118 aa13.44□□□□□ -0.26
SMPD3-203ENST00000563226 A8MZ25 164 aa13.44□□□□□ -0.26
SMPD3-203ENST00000563226 CSDC2Q9Y534 153 aaKnown RBP13.44□□□□□ -0.26
SMPD3-203ENST00000563226 IGHV1-58A0A0C4DH39 117 aa13.43□□□□□ -0.26
SMPD3-203ENST00000563226 C10orf126Q8N4M7 172 aa13.43□□□□□ -0.26
SMPD3-203ENST00000563226 GEMIN7Q9H840 131 aaKnown RBP13.43□□□□□ -0.26
SMPD3-203ENST00000563226 CDKN2A-AS1Q9UH64 79 aa13.43□□□□□ -0.26
SMPD3-203ENST00000563226 CDC42SE2Q9NRR3 84 aa13.43□□□□□ -0.26
SMPD3-203ENST00000563226 IGHV4-28A0A0C4DH34 117 aa13.42□□□□□ -0.26
SMPD3-203ENST00000563226 A0A1W2PPM0 123 aa13.42□□□□□ -0.26
SMPD3-203ENST00000563226 CYSRT1A8MQ03 144 aa13.42□□□□□ -0.26
SMPD3-203ENST00000563226 IGHV4-30-4P0DP06 118 aa13.42□□□□□ -0.26
SMPD3-203ENST00000563226 SPANXB1Q9NS25 103 aaPredicted RBP13.42□□□□□ -0.26
SMPD3-203ENST00000563226 UBE2L6O14933 153 aa13.41□□□□□ -0.26
SMPD3-203ENST00000563226 LINC00242Q5T6M2 205 aa13.41□□□□□ -0.26
SMPD3-203ENST00000563226 VSIG2Q96IQ7 327 aa13.41□□□□□ -0.26
SMPD3-203ENST00000563226 IGLV5-45A0A087WSX0 123 aa13.41□□□□□ -0.26
SMPD3-203ENST00000563226 A0A1B0GWB2 263 aa13.41□□□□□ -0.26
SMPD3-203ENST00000563226 TIRAPP58753 221 aa13.41□□□□□ -0.26
SMPD3-203ENST00000563226 OXLD1Q5BKU9 147 aa13.41□□□□□ -0.26
SMPD3-203ENST00000563226 SAMD5Q5TGI4 173 aa13.41□□□□□ -0.26
SMPD3-203ENST00000563226 TRAV13-1A0A0B4J241 112 aa13.4□□□□□ -0.26
SMPD3-203ENST00000563226 IGHV3-30P01768 117 aa13.4□□□□□ -0.26
SMPD3-203ENST00000563226 IGHV3-30-5P0DP03 117 aa13.4□□□□□ -0.26
SMPD3-203ENST00000563226 TRBV6-8A0A0A6YYG3 113 aa13.4□□□□□ -0.27
SMPD3-203ENST00000563226 GYPEP15421 78 aa13.4□□□□□ -0.27
SMPD3-203ENST00000563226 GAGE6Q13070 117 aa13.4□□□□□ -0.27
SMPD3-203ENST00000563226 GAGE10A6NGK3 116 aa13.39□□□□□ -0.27
SMPD3-203ENST00000563226 LYRM9A8MSI8 78 aa13.39□□□□□ -0.27
SMPD3-203ENST00000563226 A0A0J9YXY3 114 aa13.38□□□□□ -0.27
SMPD3-203ENST00000563226 IGLL5B9A064 214 aa13.38□□□□□ -0.27
SMPD3-203ENST00000563226 Q8NAQ8 132 aa13.38□□□□□ -0.27
SMPD3-203ENST00000563226 K7EP34 96 aa13.38□□□□□ -0.27
SMPD3-203ENST00000563226 CELA1Q9UNI1 258 aa13.38□□□□□ -0.27
SMPD3-203ENST00000563226 FAM19A3Q7Z5A8 133 aa13.37□□□□□ -0.27
SMPD3-203ENST00000563226 KRTAP10-11P60412 298 aa13.36□□□□□ -0.27
SMPD3-203ENST00000563226 HERVK_113P63121 156 aa13.36□□□□□ -0.27
SMPD3-203ENST00000563226 TMEM101Q96IK0 257 aa13.36□□□□□ -0.27
SMPD3-203ENST00000563226 NDUFA12Q9UI09 145 aa13.36□□□□□ -0.27
SMPD3-203ENST00000563226 IGLV4-60A0A075B6I1 120 aa13.36□□□□□ -0.27
SMPD3-203ENST00000563226 PRO0255Q9UI72 69 aa13.36□□□□□ -0.27
SMPD3-203ENST00000563226 SPCS1Q9Y6A9 102 aa13.36□□□□□ -0.27
SMPD3-203ENST00000563226 STAB1Q9NY15 2570 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 H7C423 109 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 FABP2P12104 132 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 SMAGPQ0VAQ4 97 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 CHCHD5Q9BSY4 110 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 TMEM238LA0A1B0GVL6 79 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 A6NJY4 79 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 ATP6V0E2Q8NHE4 81 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 RNF183Q96D59 192 aa13.35□□□□□ -0.27
SMPD3-203ENST00000563226 A0A096LPF7 62 aa13.34□□□□□ -0.27
SMPD3-203ENST00000563226 LITAFQ99732 161 aa13.34□□□□□ -0.27
SMPD3-203ENST00000563226 APOMO95445 188 aa13.33□□□□□ -0.27
SMPD3-203ENST00000563226 MIFP14174 115 aa13.33□□□□□ -0.27
SMPD3-203ENST00000563226 ZFAND6Q6FIF0 208 aa13.33□□□□□ -0.27
SMPD3-203ENST00000563226 GTF2H5Q6ZYL4 71 aa13.33□□□□□ -0.27
SMPD3-203ENST00000563226 C3orf56Q8N813 242 aa13.33□□□□□ -0.27
SMPD3-203ENST00000563226 ANK2Q01484 3957 aa13.33□□□□□ -0.28
SMPD3-203ENST00000563226 PRIMA1Q86XR5 153 aa13.33□□□□□ -0.28
SMPD3-203ENST00000563226 BAHCC1Q9P281 2608 aa13.32□□□□□ -0.28
SMPD3-203ENST00000563226 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
SMPD3-203ENST00000563226 SMIM1B2RUZ4 78 aa13.32□□□□□ -0.28
SMPD3-203ENST00000563226 PAX4O43316 350 aa13.32□□□□□ -0.28
SMPD3-203ENST00000563226 DAD1P61803 113 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms