RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SNRPD3P62318 126 aaKnown RBP1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 CIRBPQ14011 172 aaKnown RBP1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 CLLU1Q5K131 121 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 C9orf153Q5TBE3 101 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 MRPL54Q6P161 138 aaKnown RBP1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 LYZL1Q6UWQ5 148 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 SOSTDC1Q6X4U4 206 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 C2orf91Q6ZV80 131 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 DCANP1Q8TF63 244 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 SFT2D1Q8WV19 159 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 MUCL1Q96DR8 90 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 MRPS24Q96EL2 167 aaKnown RBP1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 OR4C12Q96R67 309 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 IMMP2LQ96T52 175 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 SDF2Q99470 211 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 FAIMQ9NVQ4 179 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 SCN3BQ9NY72 215 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 COMMD3Q9UBI1 195 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 MPC1Q9Y5U8 109 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 LY96Q9Y6Y9 160 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 DNAH3Q8TD57 4116 aa1.31□□□□□ -2.2
HDGFL3-202ENST00000562702 DYNC2H1Q8NCM8 4307 aaKnown RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 UQCRHLA0A096LP55 91 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 A0A1W2PQD3 144 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 FAM24AA6NFZ4 105 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 B4DSR2 109 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 ZNF736B4DX44 427 aaPredicted RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 HYPMO75409 117 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 CD2P06729 351 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 CTSDP07339 412 aaPredicted RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 CD14P08571 375 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 LINC00032P0C843 101 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 GZMBP10144 247 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 CKS2P33552 79 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 FUSP35637 526 aaKnown RBP eCLIP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 RPL28P46779 137 aaKnown RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 HINT1P49773 126 aaPredicted RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 FXYD2P54710 66 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 CCL8P80075 99 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 PRB3Q04118 309 aaPredicted RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 HSD52Q0P140 79 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 ZNF846Q147U1 533 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 CDK5R1Q15078 307 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 Q5XG85 94 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 C12orf73Q69YU5 71 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 ZCCHC23Q6ZST2 131 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 PHF5AQ7RTV0 110 aaKnown RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 CLECL1Q8IZS7 167 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 DEFB108BQ8NET1 73 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 PFN4Q8NHR9 129 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 SMCR5Q8TEV8 140 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 CHCHD1Q96BP2 118 aaKnown RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 AQP10Q96PS8 301 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 RETNLBQ9BQ08 111 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 MRPL57Q9BQC6 102 aaKnown RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 WFDC6Q9BQY6 131 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 LINC00574Q9H8X3 128 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 BCL2L10Q9HD36 194 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 DYNLRB1Q9NP97 96 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 C14orf132Q9NPU4 83 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 RPRMQ9NS64 109 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 METTL1Q9UBP6 276 aaKnown RBP1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 OR5V1Q9UGF6 321 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 U3KQK5 164 aa1.3□□□□□ -2.2
HDGFL3-202ENST00000562702 IGKV1D-42A0A075B6H8 117 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 TRBV20-1A0A075B6N2 111 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 TRAV12-2A0A075B6T6 113 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 TRAV7A0A075B6U4 112 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 TRBV10-2A0A0K0K1G8 114 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 C3orf85A0A1B0GTC6 90 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 FAM236AA0A1B0GUQ0 79 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 FAM236BA0A1B0GV22 79 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 hDV103S1A0JD37 113 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 HMSDA8MTL9 139 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 H7C2G1 150 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 J3QLW9 94 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 J3QRE1 110 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 M0R233 179 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 GEMIN2O14893 280 aaKnown RBP1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 MRPL33O75394 65 aaKnown RBP1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 TRACP01848 142 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 IGKV1-16P04430 117 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 SLC25A5P05141 298 aaKnown RBP1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 CGB3P0DN86 165 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 CGB7P0DN87 165 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 SLC25A4P12235 298 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 PIPP12273 146 aaPredicted RBP1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 IFITM1P13164 125 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 RNASE4P34096 147 aaKnown RBP1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 NPC2P61916 151 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 GNG11P61952 73 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 RPL38P63173 70 aaKnown RBP1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 SUPT4H1P63272 117 aaKnown RBP1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 ZNF90Q03938 601 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 DIAPH2-AS1Q14236 149 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 ESRGQ1W209 222 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 DEFB112Q30KQ8 113 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 Q56UQ5 140 aa1.29□□□□□ -2.2
HDGFL3-202ENST00000562702 C2orf82Q6UX34 121 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms