RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-215ENST00000561367 SCO1O75880 301 aa6.73□□□□□ -1.33
KNSTRN-215ENST00000561367 MRPL52Q86TS9 123 aaKnown RBP6.73□□□□□ -1.33
KNSTRN-215ENST00000561367 LINC00518Q8N0U6 118 aa6.73□□□□□ -1.33
KNSTRN-215ENST00000561367 TIMM21Q9BVV7 248 aa6.73□□□□□ -1.33
KNSTRN-215ENST00000561367 CSDC2Q9Y534 153 aaKnown RBP6.73□□□□□ -1.33
KNSTRN-215ENST00000561367 LOC389332A0A1B0GUA5 103 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 PCP4L1A6NKN8 68 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 TRGC2P03986 189 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 NPSP0C0P6 89 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 Q0VG73 95 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 AMMECR1LQ6DCA0 310 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 Q6ZR54 194 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 NFE4Q86UQ8 179 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 C18orf32Q8TCD1 76 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 TMEM101Q96IK0 257 aa6.72□□□□□ -1.33
KNSTRN-215ENST00000561367 PLECQ15149 4684 aaKnown RBP6.71□□□□□ -1.33
KNSTRN-215ENST00000561367 TRAV8-3A0A0A6YYJ7 113 aa6.71□□□□□ -1.34
KNSTRN-215ENST00000561367 IBA57-AS1B1ANH7 110 aa6.71□□□□□ -1.34
KNSTRN-215ENST00000561367 IFI27P40305 119 aaPredicted RBP6.71□□□□□ -1.34
KNSTRN-215ENST00000561367 FA2HQ7L5A8 372 aa6.71□□□□□ -1.34
KNSTRN-215ENST00000561367 CDIP1Q9H305 208 aa6.71□□□□□ -1.34
KNSTRN-215ENST00000561367 SPANXA1Q9NS26 97 aa6.71□□□□□ -1.34
KNSTRN-215ENST00000561367 COX11Q9Y6N1 276 aa6.71□□□□□ -1.34
KNSTRN-215ENST00000561367 LINC00614P0C842 121 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 FGF6P10767 208 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 RBX1P62877 108 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 GAGE6Q13070 117 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 MPV17L2Q567V2 206 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 DGAT2L7PQ6IED9 249 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 CHCHD1Q96BP2 118 aaKnown RBP6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 RMI2Q96E14 147 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 CYSLTR1Q9Y271 337 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 PYGO1Q9Y3Y4 419 aa6.7□□□□□ -1.34
KNSTRN-215ENST00000561367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 IGKV2-29A2NJV5 120 aaPredicted RBP6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 CCL25O15444 150 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 IGHV3-30P01768 117 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 IGHV3-33P01772 117 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 CRPP02741 224 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 ANGP03950 147 aaKnown RBP6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 IGHV3-30-3P0DP02 117 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 IGHV3-30-5P0DP03 117 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 MIAQ16674 131 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 PAPPA-AS1Q5QFB9 102 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 RNASEKQ6P5S7 137 aaKnown RBP6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 OR5A1Q8NGJ0 315 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 PRR34Q9NV39 138 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 UBE2D4Q9Y2X8 147 aa6.69□□□□□ -1.34
KNSTRN-215ENST00000561367 LYSTQ99698 3801 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 TRAV8-4A0A0B4J246 113 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 MRPS36P82909 103 aaKnown RBP6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 C1orf134Q5TEV5 83 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 C2orf66Q6UXQ4 117 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 C6orf223Q8N319 242 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 Q8N976 141 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 KLK12Q9UKR0 248 aa6.68□□□□□ -1.34
KNSTRN-215ENST00000561367 H0Y8G0 127 aa6.67□□□□□ -1.34
KNSTRN-215ENST00000561367 ZNF664Q8N3J9 261 aa6.67□□□□□ -1.34
KNSTRN-215ENST00000561367 DEFB104AQ8WTQ1 72 aa6.67□□□□□ -1.34
KNSTRN-215ENST00000561367 TOMM6Q96B49 74 aa6.67□□□□□ -1.34
KNSTRN-215ENST00000561367 CDC42SE2Q9NRR3 84 aa6.67□□□□□ -1.34
KNSTRN-215ENST00000561367 ALMS1Q8TCU4 4167 aa6.67□□□□□ -1.34
KNSTRN-215ENST00000561367 IGLV4-60A0A075B6I1 120 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 C1orf196B1AJZ1 125 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 M0R2N4 97 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 HBDP02042 147 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 REG3AQ06141 175 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 Q6ZN92 141 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 ERASQ7Z444 233 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 LINC00269Q8N2A0 174 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 UBE2WQ96B02 151 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 TMEM141Q96I45 108 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
KNSTRN-215ENST00000561367 A4D1N5 150 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BKO60814 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HSBP1O75506 76 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BJP06899 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BOP23527 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BBP33778 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BDP58876 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BCP62807 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 RPL39P62891 51 aaKnown RBP6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST2H2BEQ16778 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 LINC00336Q6ZUF6 198 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BHQ93079 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BNQ99877 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 HIST1H2BMQ99879 126 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 C1orf43Q9BWL3 253 aa6.65□□□□□ -1.34
KNSTRN-215ENST00000561367 IGIPA6NJ69 53 aa6.64□□□□□ -1.35
KNSTRN-215ENST00000561367 PET117Q6UWS5 81 aa6.64□□□□□ -1.35
KNSTRN-215ENST00000561367 ENHOQ6UWT2 76 aa6.64□□□□□ -1.35
KNSTRN-215ENST00000561367 URB1-AS1Q96HZ7 61 aa6.64□□□□□ -1.35
KNSTRN-215ENST00000561367 VPS13DQ5THJ4 4388 aa6.64□□□□□ -1.35
KNSTRN-215ENST00000561367 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms