RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 LINC00694P0DN24 101 aa10.46□□□□□ -0.73
CRTC3-210ENST00000560927 ADAMTSL4-AS1Q5T5F5 129 aa10.46□□□□□ -0.73
CRTC3-210ENST00000560927 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.46□□□□□ -0.73
CRTC3-210ENST00000560927 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.73
CRTC3-210ENST00000560927 RNASE1P07998 156 aaKnown RBP10.46□□□□□ -0.74
CRTC3-210ENST00000560927 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.74
CRTC3-210ENST00000560927 H7C2G1 150 aa10.45□□□□□ -0.74
CRTC3-210ENST00000560927 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
CRTC3-210ENST00000560927 NOP10Q9NPE3 64 aaKnown RBP10.45□□□□□ -0.74
CRTC3-210ENST00000560927 C16orf95Q9H693 158 aa10.45□□□□□ -0.74
CRTC3-210ENST00000560927 GEMIN7Q9H840 131 aaKnown RBP10.45□□□□□ -0.74
CRTC3-210ENST00000560927 COX6A2Q02221 97 aa10.44□□□□□ -0.74
CRTC3-210ENST00000560927 NTM-AS1Q6ZSK4 140 aa10.44□□□□□ -0.74
CRTC3-210ENST00000560927 A0A0B4J2C4 111 aa10.44□□□□□ -0.74
CRTC3-210ENST00000560927 K7EQD1 137 aa10.44□□□□□ -0.74
CRTC3-210ENST00000560927 NDUFA7O95182 113 aa10.44□□□□□ -0.74
CRTC3-210ENST00000560927 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
CRTC3-210ENST00000560927 RPL35AP18077 110 aaKnown RBP10.44□□□□□ -0.74
CRTC3-210ENST00000560927 DGAT2L7PQ6IED9 249 aa10.44□□□□□ -0.74
CRTC3-210ENST00000560927 PRSS2P07478 247 aa10.43□□□□□ -0.74
CRTC3-210ENST00000560927 LYRM7Q5U5X0 104 aa10.43□□□□□ -0.74
CRTC3-210ENST00000560927 PLAC8L1A1L4L8 177 aa10.43□□□□□ -0.74
CRTC3-210ENST00000560927 C19orf73Q9NVV2 129 aa10.43□□□□□ -0.74
CRTC3-210ENST00000560927 C2CD3Q4AC94 2353 aa10.43□□□□□ -0.74
CRTC3-210ENST00000560927 GAGE12JA6NER3 117 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 IGLV1-51P01701 117 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 NPC2P61916 151 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
CRTC3-210ENST00000560927 GAGE4Q13068 117 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 GAGE5Q13069 117 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
CRTC3-210ENST00000560927 ERG28Q9UKR5 140 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 TRBV20-1A0A075B6N2 111 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 TRAV4A0A0B4J268 109 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 J3QR89 54 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 PLA2G2AP14555 144 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 ZFAND6Q6FIF0 208 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 C1QTNF4Q9BXJ3 329 aa10.42□□□□□ -0.74
CRTC3-210ENST00000560927 IGLV5-45A0A087WSX0 123 aa10.41□□□□□ -0.74
CRTC3-210ENST00000560927 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
CRTC3-210ENST00000560927 HELZ2Q9BYK8 2649 aaKnown RBP10.41□□□□□ -0.74
CRTC3-210ENST00000560927 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
CRTC3-210ENST00000560927 TIRAPP58753 221 aa10.41□□□□□ -0.74
CRTC3-210ENST00000560927 FOXI1Q12951 378 aa10.41□□□□□ -0.74
CRTC3-210ENST00000560927 LINC00242Q5T6M2 205 aa10.41□□□□□ -0.74
CRTC3-210ENST00000560927 TMEM101Q96IK0 257 aa10.41□□□□□ -0.74
CRTC3-210ENST00000560927 GAGE12HA6NDE8 117 aa10.4□□□□□ -0.74
CRTC3-210ENST00000560927 GAGE7O76087 117 aa10.4□□□□□ -0.74
CRTC3-210ENST00000560927 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
CRTC3-210ENST00000560927 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
CRTC3-210ENST00000560927 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
CRTC3-210ENST00000560927 SPANXDQ9BXN6 97 aa10.4□□□□□ -0.74
CRTC3-210ENST00000560927 SPANXCQ9NY87 97 aa10.4□□□□□ -0.74
CRTC3-210ENST00000560927 UNC79Q9P2D8 2635 aa10.4□□□□□ -0.74
CRTC3-210ENST00000560927 CIDEAO60543 219 aa10.4□□□□□ -0.75
CRTC3-210ENST00000560927 DAZ2Q13117 558 aaKnown RBP10.4□□□□□ -0.75
CRTC3-210ENST00000560927 MIAQ16674 131 aa10.4□□□□□ -0.75
CRTC3-210ENST00000560927 GTSF1LQ9H1H1 148 aa10.4□□□□□ -0.75
CRTC3-210ENST00000560927 Q1RN00 199 aa10.39□□□□□ -0.75
CRTC3-210ENST00000560927 DAZ4Q86SG3 579 aaKnown RBP10.39□□□□□ -0.75
CRTC3-210ENST00000560927 SBSPONQ8IVN8 264 aa10.39□□□□□ -0.75
CRTC3-210ENST00000560927 DAND5Q8N907 189 aa10.39□□□□□ -0.75
CRTC3-210ENST00000560927 SMR3AQ99954 134 aa10.39□□□□□ -0.75
CRTC3-210ENST00000560927 DAZ3Q9NR90 486 aaKnown RBP10.39□□□□□ -0.75
CRTC3-210ENST00000560927 LOC100131303A0A0U1RQF7 123 aa10.39□□□□□ -0.75
CRTC3-210ENST00000560927 CSNK1G2-AS1Q8NCQ2 148 aa10.39□□□□□ -0.75
CRTC3-210ENST00000560927 TRAV13-1A0A0B4J241 112 aa10.38□□□□□ -0.75
CRTC3-210ENST00000560927 ATP6V0E2Q8NHE4 81 aa10.38□□□□□ -0.75
CRTC3-210ENST00000560927 C16orf74Q96GX8 76 aa10.38□□□□□ -0.75
CRTC3-210ENST00000560927 TRGV2A0A075B6R0 118 aa10.38□□□□□ -0.75
CRTC3-210ENST00000560927 HILS1P60008 231 aa10.38□□□□□ -0.75
CRTC3-210ENST00000560927 CMC4P56277 68 aaPredicted RBP10.37□□□□□ -0.75
CRTC3-210ENST00000560927 HERVK_113P63121 156 aa10.37□□□□□ -0.75
CRTC3-210ENST00000560927 CARD19Q96LW7 228 aa10.37□□□□□ -0.75
CRTC3-210ENST00000560927 SPATA25Q9BR10 227 aa10.37□□□□□ -0.75
CRTC3-210ENST00000560927 CDC42SE2Q9NRR3 84 aa10.36□□□□□ -0.75
CRTC3-210ENST00000560927 CSDC2Q9Y534 153 aaKnown RBP10.36□□□□□ -0.75
CRTC3-210ENST00000560927 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
CRTC3-210ENST00000560927 NDUFA1O15239 70 aa10.36□□□□□ -0.75
CRTC3-210ENST00000560927 TRIAP1O43715 76 aa10.36□□□□□ -0.75
CRTC3-210ENST00000560927 TEN1Q86WV5 123 aa10.36□□□□□ -0.75
CRTC3-210ENST00000560927 FAM110AQ9BQ89 295 aa10.36□□□□□ -0.75
CRTC3-210ENST00000560927 SIGMAR1Q99720 223 aa10.35□□□□□ -0.75
CRTC3-210ENST00000560927 FASNP49327 2511 aaKnown RBP10.35□□□□□ -0.75
CRTC3-210ENST00000560927 SMIM1B2RUZ4 78 aa10.35□□□□□ -0.75
CRTC3-210ENST00000560927 C9JAW5 83 aa10.35□□□□□ -0.75
CRTC3-210ENST00000560927 J3QKU1 62 aa10.35□□□□□ -0.75
CRTC3-210ENST00000560927 KRTAP10-3P60369 221 aa10.35□□□□□ -0.75
CRTC3-210ENST00000560927 ZNF625Q96I27 306 aaPredicted RBP10.35□□□□□ -0.75
CRTC3-210ENST00000560927 Q9H8V8 135 aa10.35□□□□□ -0.75
CRTC3-210ENST00000560927 SMAGPQ0VAQ4 97 aa10.34□□□□□ -0.75
CRTC3-210ENST00000560927 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
CRTC3-210ENST00000560927 ANKRD29Q8N6D5 301 aa10.34□□□□□ -0.75
CRTC3-210ENST00000560927 A0A0U1RRA0 63 aa10.33□□□□□ -0.76
CRTC3-210ENST00000560927 SLC25A20O43772 301 aa10.33□□□□□ -0.76
CRTC3-210ENST00000560927 TIMM17BO60830 172 aa10.33□□□□□ -0.76
CRTC3-210ENST00000560927 OVOL2Q9BRP0 275 aa10.33□□□□□ -0.76
CRTC3-210ENST00000560927 TRBV30A0A0K0K1B3 111 aa10.33□□□□□ -0.76
CRTC3-210ENST00000560927 PPDPFLQ8WWR9 84 aa10.33□□□□□ -0.76
CRTC3-210ENST00000560927 TMEM243Q9BU79 118 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms