RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 TRGC1P0CF51 173 aa5.9□□□□□ -1.46
HERC1-210ENST00000560897 GZMBP10144 247 aa5.9□□□□□ -1.46
HERC1-210ENST00000560897 PKIAP61925 76 aa5.9□□□□□ -1.46
HERC1-210ENST00000560897 CTAG1AP78358 180 aa5.9□□□□□ -1.46
HERC1-210ENST00000560897 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.46
HERC1-210ENST00000560897 RIGQ13278 110 aa5.9□□□□□ -1.46
HERC1-210ENST00000560897 PGLYRP4Q96LB8 373 aa5.9□□□□□ -1.46
HERC1-210ENST00000560897 GFRA4Q9GZZ7 299 aa5.9□□□□□ -1.46
HERC1-210ENST00000560897 NAT8BQ9UHF3 227 aa5.9□□□□□ -1.46
HERC1-210ENST00000560897 MUC21A0A0G2JKD1 596 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 MUC21A0A140T8X8 626 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 OR5AL1P0C617 328 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 COX6A2Q02221 97 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 RHEBQ15382 184 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 MPV17L2Q567V2 206 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 DNLZQ5SXM8 178 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 LYZL1Q6UWQ5 148 aa5.89□□□□□ -1.47
HERC1-210ENST00000560897 A0A1B0GUT8 65 aa5.88□□□□□ -1.47
HERC1-210ENST00000560897 HIGD1CA8MV81 97 aa5.88□□□□□ -1.47
HERC1-210ENST00000560897 RNASE3P12724 160 aaKnown RBP5.88□□□□□ -1.47
HERC1-210ENST00000560897 NTF3P20783 257 aa5.88□□□□□ -1.47
HERC1-210ENST00000560897 FAM74A4Q5TZK3 123 aa5.88□□□□□ -1.47
HERC1-210ENST00000560897 C14orf178Q8N769 122 aaPredicted RBP5.88□□□□□ -1.47
HERC1-210ENST00000560897 PTH2Q96A98 100 aa5.88□□□□□ -1.47
HERC1-210ENST00000560897 C9orf85Q96MD7 179 aa5.88□□□□□ -1.47
HERC1-210ENST00000560897 AP1S3Q96PC3 154 aa5.88□□□□□ -1.47
HERC1-210ENST00000560897 SMCO4Q9NRQ5 59 aa5.88□□□□□ -1.47
HERC1-210ENST00000560897 A0A1B0GW15 77 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 C7orf77A4D0Y5 90 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 RHODO00212 210 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 PTTG1IPP53801 180 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 RAB4BP61018 213 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 PIK3CD-AS1Q5SR53 167 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 BTF3L4Q96K17 158 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 CHCHD5Q9BSY4 110 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 V9GYV3 84 aa5.87□□□□□ -1.47
HERC1-210ENST00000560897 SNAI2O43623 268 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 MGPP08493 103 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 SMIM6P0DI80 62 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 CAMPP49913 170 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 FOXA3P55318 350 aaPredicted RBP5.86□□□□□ -1.47
HERC1-210ENST00000560897 RPL36AP83881 106 aaKnown RBP5.86□□□□□ -1.47
HERC1-210ENST00000560897 ZNF56Q15929 161 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 OR10AG1Q8NH19 301 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 RPL36ALQ969Q0 106 aaKnown RBP5.86□□□□□ -1.47
HERC1-210ENST00000560897 IMMP2LQ96T52 175 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 LINC00474Q9P2X8 69 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 Q9UF83 564 aa5.86□□□□□ -1.47
HERC1-210ENST00000560897 IGLV10-54A0A075B6I4 117 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 SMIM27A0A1W2PRY6 76 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 COLCA2A8K830 154 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 IGLC6P0CF74 106 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 RAB5BP61020 215 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 LINC00269Q8N2A0 174 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 NUP35Q8NFH5 326 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 TMEM242Q9NWH2 141 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 PKIGQ9Y2B9 76 aa5.85□□□□□ -1.47
HERC1-210ENST00000560897 TRBV6-8A0A0A6YYG3 113 aa5.84□□□□□ -1.47
HERC1-210ENST00000560897 SLPIP03973 132 aa5.84□□□□□ -1.47
HERC1-210ENST00000560897 RPS10P46783 165 aaKnown RBP5.84□□□□□ -1.47
HERC1-210ENST00000560897 MRPL54Q6P161 138 aaKnown RBP5.84□□□□□ -1.47
HERC1-210ENST00000560897 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
HERC1-210ENST00000560897 CTRLP40313 264 aa5.83□□□□□ -1.48
HERC1-210ENST00000560897 LINC01547P58512 204 aaPredicted RBP5.83□□□□□ -1.48
HERC1-210ENST00000560897 HBBP68871 147 aa5.83□□□□□ -1.48
HERC1-210ENST00000560897 COX19Q49B96 90 aa5.83□□□□□ -1.48
HERC1-210ENST00000560897 ATP5L2Q7Z4Y8 100 aa5.83□□□□□ -1.48
HERC1-210ENST00000560897 CBLN2Q8IUK8 224 aa5.83□□□□□ -1.48
HERC1-210ENST00000560897 JPT2Q9H910 190 aa5.83□□□□□ -1.48
HERC1-210ENST00000560897 PRR34Q9NV39 138 aa5.83□□□□□ -1.48
HERC1-210ENST00000560897 IGLV1-50A0A075B6I6 118 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 TRBV7-3A0A075B6L6 115 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 TRAV9-1A0A075B6T8 112 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 TRBV10-1A0A0K0K1A3 114 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 C5orf52A6NGY3 159 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 C1orf196B1AJZ1 125 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 PPP1R17O96001 155 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 UBE2D1P51668 147 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 UBE2D3P61077 147 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 UBE2D2P62837 147 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 KRTAP26-1Q6PEX3 210 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 TMEM191AQ9H0A3 160 aa5.82□□□□□ -1.48
HERC1-210ENST00000560897 A0A096LNI7 61 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 TRAV8-4A0A0B4J246 113 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 B5MCH6 92 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 MT-ND6P03923 174 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 CKS2P33552 79 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 REG3AQ06141 175 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 RASL11AQ6T310 242 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 DIRC1Q969H9 104 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 YPEL4Q96NS1 127 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 C12orf57Q99622 126 aa5.81□□□□□ -1.48
HERC1-210ENST00000560897 RBX1P62877 108 aa5.8□□□□□ -1.48
HERC1-210ENST00000560897 GAGE6Q13070 117 aa5.8□□□□□ -1.48
HERC1-210ENST00000560897 UFSP1Q6NVU6 142 aa5.8□□□□□ -1.48
HERC1-210ENST00000560897 CNFNQ9BYD5 112 aa5.8□□□□□ -1.48
HERC1-210ENST00000560897 MUC17Q685J3 4493 aa5.8□□□□□ -1.48
HERC1-210ENST00000560897 APCSP02743 223 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms