RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 C20orf173Q96LM9 149 aa9.85□□□□□ -0.83
CSPG4P11-201ENST00000560634 NUP210Q8TEM1 1887 aaPredicted RBP9.85□□□□□ -0.83
CSPG4P11-201ENST00000560634 A0A087WZ39 114 aa9.84□□□□□ -0.83
CSPG4P11-201ENST00000560634 DEFB131BA0A096LNP1 70 aa9.84□□□□□ -0.83
CSPG4P11-201ENST00000560634 YPEL4Q96NS1 127 aa9.84□□□□□ -0.83
CSPG4P11-201ENST00000560634 DENND4CQ5VZ89 1909 aa9.84□□□□□ -0.83
CSPG4P11-201ENST00000560634 HILS1P60008 231 aa9.83□□□□□ -0.84
CSPG4P11-201ENST00000560634 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
CSPG4P11-201ENST00000560634 LY6LH3BQJ8 138 aa9.83□□□□□ -0.84
CSPG4P11-201ENST00000560634 A0A096LNI7 61 aa9.83□□□□□ -0.84
CSPG4P11-201ENST00000560634 SCXQ7RTU7 201 aa9.83□□□□□ -0.84
CSPG4P11-201ENST00000560634 PRR15LQ9BU68 103 aa9.83□□□□□ -0.84
CSPG4P11-201ENST00000560634 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
CSPG4P11-201ENST00000560634 NAV2Q8IVL1 2488 aa9.83□□□□□ -0.84
CSPG4P11-201ENST00000560634 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
CSPG4P11-201ENST00000560634 WISP2O76076 250 aa9.82□□□□□ -0.84
CSPG4P11-201ENST00000560634 FRMPD3Q5JV73 1810 aa9.82□□□□□ -0.84
CSPG4P11-201ENST00000560634 C1orf229Q6ZS94 237 aaPredicted RBP9.82□□□□□ -0.84
CSPG4P11-201ENST00000560634 LST1O00453 97 aa9.82□□□□□ -0.84
CSPG4P11-201ENST00000560634 CRIP3Q6Q6R5 217 aa9.82□□□□□ -0.84
CSPG4P11-201ENST00000560634 CD164L2Q6UWJ8 174 aa9.82□□□□□ -0.84
CSPG4P11-201ENST00000560634 MUC7Q8TAX7 377 aa9.82□□□□□ -0.84
CSPG4P11-201ENST00000560634 OBSL1O75147 1896 aa9.81□□□□□ -0.84
CSPG4P11-201ENST00000560634 C1orf158Q8N1D5 194 aa9.81□□□□□ -0.84
CSPG4P11-201ENST00000560634 DHRS4-AS1Q9P1J3 65 aa9.81□□□□□ -0.84
CSPG4P11-201ENST00000560634 EP400Q96L91 3159 aa9.8□□□□□ -0.84
CSPG4P11-201ENST00000560634 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
CSPG4P11-201ENST00000560634 COX7CP15954 63 aa9.8□□□□□ -0.84
CSPG4P11-201ENST00000560634 Q8N976 141 aa9.8□□□□□ -0.84
CSPG4P11-201ENST00000560634 IGLV2-11P01706 119 aa9.8□□□□□ -0.84
CSPG4P11-201ENST00000560634 TECTAO75443 2155 aa9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 M0R378 163 aa9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 IGHV4-31P0DP07 118 aa9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 Q6ZQY7 126 aa9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 NRACQ8N912 160 aa9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 PLXNB3Q9ULL4 1909 aa9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 HIVEP3Q5T1R4 2406 aa9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 CCDC168Q8NDH2 2452 aa9.79□□□□□ -0.84
CSPG4P11-201ENST00000560634 TSHBP01222 138 aa9.78□□□□□ -0.84
CSPG4P11-201ENST00000560634 PLA2G5P39877 138 aa9.78□□□□□ -0.84
CSPG4P11-201ENST00000560634 MED12LQ86YW9 2145 aa9.78□□□□□ -0.84
CSPG4P11-201ENST00000560634 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
CSPG4P11-201ENST00000560634 MYO9AB2RTY4 2548 aa9.78□□□□□ -0.84
CSPG4P11-201ENST00000560634 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
CSPG4P11-201ENST00000560634 MRGPRG-AS1Q2M3A8 158 aa9.78□□□□□ -0.84
CSPG4P11-201ENST00000560634 Q6Q795 121 aa9.78□□□□□ -0.84
CSPG4P11-201ENST00000560634 A0A0U1RQV1 116 aa9.77□□□□□ -0.85
CSPG4P11-201ENST00000560634 RNASE3P12724 160 aaKnown RBP9.77□□□□□ -0.85
CSPG4P11-201ENST00000560634 Q6ZSV7 163 aa9.77□□□□□ -0.85
CSPG4P11-201ENST00000560634 KLLNB2CW77 178 aa9.77□□□□□ -0.85
CSPG4P11-201ENST00000560634 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.85
CSPG4P11-201ENST00000560634 Q8N9L7 120 aa9.76□□□□□ -0.85
CSPG4P11-201ENST00000560634 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.76□□□□□ -0.85
CSPG4P11-201ENST00000560634 ZNF706Q9Y5V0 76 aaPredicted RBP9.76□□□□□ -0.85
CSPG4P11-201ENST00000560634 COX17Q14061 63 aa9.75□□□□□ -0.85
CSPG4P11-201ENST00000560634 PSMG3-AS1Q96PY0 264 aa9.75□□□□□ -0.85
CSPG4P11-201ENST00000560634 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
CSPG4P11-201ENST00000560634 TRAV10A0A0B4J240 114 aa9.75□□□□□ -0.85
CSPG4P11-201ENST00000560634 C3orf84H3BNL1 204 aa9.75□□□□□ -0.85
CSPG4P11-201ENST00000560634 PROK1P58294 105 aa9.75□□□□□ -0.85
CSPG4P11-201ENST00000560634 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P11-201ENST00000560634 COL4A3Q01955 1670 aa9.75□□□□□ -0.85
CSPG4P11-201ENST00000560634 LELP1Q5T871 98 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 UBE2D4Q9Y2X8 147 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 DENND4AQ7Z401 1863 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 SHISA2Q6UWI4 295 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 C7orf33Q8WU49 177 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 C9orf85Q96MD7 179 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 BBC3Q96PG8 261 aaPredicted RBP9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 CNFNQ9BYD5 112 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 ABCA2Q9BZC7 2435 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 LINC00959A0A1B0GUT2 108 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 Q8N6K4 173 aa9.74□□□□□ -0.85
CSPG4P11-201ENST00000560634 SMIM26A0A096LP01 95 aa9.73□□□□□ -0.85
CSPG4P11-201ENST00000560634 Q6JHZ5 121 aa9.73□□□□□ -0.85
CSPG4P11-201ENST00000560634 PIEZO1Q92508 2521 aa9.73□□□□□ -0.85
CSPG4P11-201ENST00000560634 SMIM11BQ8TCY0 68 aa9.73□□□□□ -0.85
CSPG4P11-201ENST00000560634 C22orf34Q6ZV56 151 aa9.73□□□□□ -0.85
CSPG4P11-201ENST00000560634 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
CSPG4P11-201ENST00000560634 C19orf84I3L1E1 186 aa9.72□□□□□ -0.85
CSPG4P11-201ENST00000560634 A8MZ25 164 aa9.72□□□□□ -0.85
CSPG4P11-201ENST00000560634 UBE2D1P51668 147 aa9.72□□□□□ -0.85
CSPG4P11-201ENST00000560634 XGP55808 180 aa9.72□□□□□ -0.85
CSPG4P11-201ENST00000560634 C11orf71Q6IPW1 123 aa9.72□□□□□ -0.85
CSPG4P11-201ENST00000560634 C11orf21Q9P2W6 132 aa9.71□□□□□ -0.85
CSPG4P11-201ENST00000560634 A6NED7 52 aa9.71□□□□□ -0.85
CSPG4P11-201ENST00000560634 WFDC13Q8IUB5 93 aa9.71□□□□□ -0.85
CSPG4P11-201ENST00000560634 Q8IZM0 81 aa9.71□□□□□ -0.85
CSPG4P11-201ENST00000560634 SERP1Q9Y6X1 66 aa9.71□□□□□ -0.85
CSPG4P11-201ENST00000560634 LRCOL1A6NCL2 159 aa9.71□□□□□ -0.86
CSPG4P11-201ENST00000560634 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
CSPG4P11-201ENST00000560634 PRORYQ9H606 182 aa9.71□□□□□ -0.86
CSPG4P11-201ENST00000560634 IGKV2-28A0A075B6P5 120 aa9.71□□□□□ -0.86
CSPG4P11-201ENST00000560634 IGKV2D-28P01615 120 aa9.71□□□□□ -0.86
CSPG4P11-201ENST00000560634 LINC00482Q8N8I6 264 aa9.7□□□□□ -0.86
CSPG4P11-201ENST00000560634 SNURFQ9Y675 71 aa9.7□□□□□ -0.86
CSPG4P11-201ENST00000560634 CCDC179H3BU77 68 aa9.7□□□□□ -0.86
CSPG4P11-201ENST00000560634 C1orf195Q5TG92 126 aa9.7□□□□□ -0.86
CSPG4P11-201ENST00000560634 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms