RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 B5MCH6 92 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 TSHBP01222 138 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 IGHV4-59P01825 116 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 ZNF22P17026 224 aaPredicted RBP6.35□□□□□ -1.39
CCDC33-209ENST00000560565 CXCL5P42830 114 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 MRPS36P82909 103 aaKnown RBP6.35□□□□□ -1.39
CCDC33-209ENST00000560565 ZNF56Q15929 161 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 LY6EQ16553 131 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 MUSTN1Q8IVN3 82 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 RNF152Q8N8N0 203 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 C15orf53Q8NAA6 179 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 C9orf85Q96MD7 179 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 AMELXQ99217 191 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 RYR1P21817 5038 aa6.35□□□□□ -1.39
CCDC33-209ENST00000560565 WNK1Q9H4A3 2382 aa6.34□□□□□ -1.39
CCDC33-209ENST00000560565 IGHV3-35A0A0C4DH35 117 aa6.34□□□□□ -1.39
CCDC33-209ENST00000560565 LST1O00453 97 aa6.34□□□□□ -1.39
CCDC33-209ENST00000560565 PF4P02776 101 aa6.34□□□□□ -1.39
CCDC33-209ENST00000560565 LINC00315P59091 139 aa6.34□□□□□ -1.39
CCDC33-209ENST00000560565 PRR9Q5T870 116 aa6.34□□□□□ -1.39
CCDC33-209ENST00000560565 ZNRF2Q8NHG8 242 aa6.34□□□□□ -1.39
CCDC33-209ENST00000560565 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.39
CCDC33-209ENST00000560565 IGHV1OR15-1A0A075B7D0 117 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 M0QY20 66 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 CD28P10747 220 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 FHL3Q13643 280 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 Q6ZS46 218 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 LINC00643Q86TS7 51 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 C20orf173Q96LM9 149 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 RHPN1-AS1Q9BWJ2 59 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 SS18L2Q9UHA2 77 aa6.33□□□□□ -1.4
CCDC33-209ENST00000560565 PRKDCP78527 4128 aaKnown RBP6.33□□□□□ -1.4
CCDC33-209ENST00000560565 IGLV4-3A0A075B6K6 122 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 IGHV3OR16-8A0A075B7F1 116 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 IGHV3-16A0A0C4DH30 117 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 GNRH2O43555 120 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 TRIAP1O43715 76 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 IGLV1-40P01703 118 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 TRACP01848 142 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 PRSS2P07478 247 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 ZNF415Q09FC8 603 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 SFTA2Q6UW10 78 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 Q8N2B8 174 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 NDUFA12Q9UI09 145 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 TNFRSF18Q9Y5U5 241 aa6.32□□□□□ -1.4
CCDC33-209ENST00000560565 TRAV4A0A0B4J268 109 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 LINC01548A6NM66 108 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 G3V318 75 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 NDUFA7O95182 113 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 IGHV3-30-3P0DP02 117 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 TIRAPP58753 221 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 TSPEAR-AS2P59090 65 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 BLCAPP62952 87 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 HERV-K104P63124 156 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 CFHR3Q02985 330 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 MEIG1Q5JSS6 88 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 FAM222AQ5U5X8 452 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 SHISA2Q6UWI4 295 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 TMEM61Q8N0U2 210 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 DAND5Q8N907 189 aa6.31□□□□□ -1.4
CCDC33-209ENST00000560565 IGHV3OR16-13A0A075B7E8 117 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 IGHV3-74A0A0B4J1X5 117 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 H7C2G1 150 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 J3KRW8 73 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 UQCRQO14949 82 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 NDUFA1O15239 70 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 ELANEP08246 267 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 NHLRC4P0CG21 123 aaPredicted RBP6.3□□□□□ -1.4
CCDC33-209ENST00000560565 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
CCDC33-209ENST00000560565 HERVK_113P63121 156 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 FAM74A4Q5TZK3 123 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 VSIG2Q96IQ7 327 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 CMYA5Q8N3K9 4069 aa6.3□□□□□ -1.4
CCDC33-209ENST00000560565 IGHV3-49A0A0A0MS15 119 aa6.29□□□□□ -1.4
CCDC33-209ENST00000560565 TEX49A0A1B0GTD5 131 aa6.29□□□□□ -1.4
CCDC33-209ENST00000560565 H7C423 109 aa6.29□□□□□ -1.4
CCDC33-209ENST00000560565 COX7A2LO14548 114 aa6.29□□□□□ -1.4
CCDC33-209ENST00000560565 PRB4P10163 310 aaPredicted RBP6.29□□□□□ -1.4
CCDC33-209ENST00000560565 TMEM95Q3KNT9 176 aa6.29□□□□□ -1.4
CCDC33-209ENST00000560565 WFDC12Q8WWY7 111 aa6.29□□□□□ -1.4
CCDC33-209ENST00000560565 ZNF702PQ9H963 129 aa6.29□□□□□ -1.4
CCDC33-209ENST00000560565 PEMTQ9UBM1 199 aa6.29□□□□□ -1.4
CCDC33-209ENST00000560565 A0A087WWL8 130 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 TRAV13-2A0A0B4J235 113 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 A0A0J9YXV3 536 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 A0A1B0GX51 115 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 ATOX1O00244 68 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 PSMB8P28062 276 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 EMP1P54849 157 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 Q6ZSV7 163 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 LINC01006Q8NI28 216 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 LINC00467Q9BRT7 94 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 SPXQ9BT56 116 aa6.28□□□□□ -1.4
CCDC33-209ENST00000560565 TRAV12-3A0A0B4J271 114 aa6.27□□□□□ -1.41
CCDC33-209ENST00000560565 S100A7L2Q5SY68 101 aa6.27□□□□□ -1.41
CCDC33-209ENST00000560565 C3orf22Q8N5N4 141 aa6.27□□□□□ -1.41
CCDC33-209ENST00000560565 DCANP1Q8TF63 244 aa6.27□□□□□ -1.41
CCDC33-209ENST00000560565 LITAFQ99732 161 aa6.27□□□□□ -1.41
CCDC33-209ENST00000560565 C16orf95Q9H693 158 aa6.27□□□□□ -1.41
CCDC33-209ENST00000560565 NOTCH3Q9UM47 2321 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms