RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 C11orf45Q8TAV5 145 aa3.72□□□□□ -1.81
TPM1-222ENST00000560131 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
TPM1-222ENST00000560131 KLK5Q9Y337 293 aaPredicted RBP3.72□□□□□ -1.81
TPM1-222ENST00000560131 URB1O60287 2271 aaKnown RBP3.72□□□□□ -1.81
TPM1-222ENST00000560131 ICE1Q9Y2F5 2266 aa3.71□□□□□ -1.82
TPM1-222ENST00000560131 IGHV4-30-2A0A087WSY4 118 aa3.71□□□□□ -1.82
TPM1-222ENST00000560131 TRAV13-1A0A0B4J241 112 aa3.71□□□□□ -1.82
TPM1-222ENST00000560131 C6orf226Q5I0X4 101 aa3.71□□□□□ -1.82
TPM1-222ENST00000560131 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
TPM1-222ENST00000560131 Q8N9P0 234 aaPredicted RBP3.71□□□□□ -1.82
TPM1-222ENST00000560131 OPRPNQ99935 248 aaPredicted RBP3.71□□□□□ -1.82
TPM1-222ENST00000560131 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
TPM1-222ENST00000560131 UBE2D4Q9Y2X8 147 aa3.71□□□□□ -1.82
TPM1-222ENST00000560131 MKI67P46013 3256 aaKnown RBP3.7□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3-64A0A075B6Q5 118 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 TRAV12-2A0A075B6T6 113 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 IGHV1OR15-1A0A075B7D0 117 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3OR16-8A0A075B7F1 116 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3-35A0A0C4DH35 117 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3-66A0A0C4DH42 116 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 DNAL4O96015 105 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 SYNJ2BPP57105 145 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 FBXL19-AS1Q494R0 122 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 C5orf56Q8N8D9 126 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 ZNF625Q96I27 306 aaPredicted RBP3.7□□□□□ -1.82
TPM1-222ENST00000560131 LINC00467Q9BRT7 94 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 CHCHD7Q9BUK0 85 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 JPT2Q9H910 190 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 SERP1Q9Y6X1 66 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 TECTAO75443 2155 aa3.7□□□□□ -1.82
TPM1-222ENST00000560131 SZT2Q5T011 3432 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 A0A087X002 238 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 TRAV41A0A0B4J266 112 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 A8MTW9 85 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 OXTP01178 125 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
TPM1-222ENST00000560131 NPC2P61916 151 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 PRB3Q04118 309 aaPredicted RBP3.69□□□□□ -1.82
TPM1-222ENST00000560131 NOTCH2NLQ7Z3S9 236 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 LINC01561Q8N1V8 128 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 Q8N2B8 174 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 LINC00167Q96N53 147 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 KRTAP1-5Q9BYS1 174 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 MOB4Q9Y3A3 225 aa3.69□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3OR16-13A0A075B7E8 117 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3-74A0A0B4J1X5 117 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 JMJD7-PLA2G4BH0Y9G9 81 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 RS1O15537 224 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 IGHG2P01859 326 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 CCKP06307 115 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 DEFB109BQ30KR1 87 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 FAM74A4Q5TZK3 123 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 UNQ9165/PRO28630Q6UXU0 137 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 SOSTDC1Q6X4U4 206 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 RHPN1-AS1Q9BWJ2 59 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 CDKN2A-AS1Q9UH64 79 aa3.68□□□□□ -1.82
TPM1-222ENST00000560131 ZNF318Q5VUA4 2279 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3-49A0A0A0MS15 119 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 G3V318 75 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 NDUFC1O43677 76 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 CRPP02741 224 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 KLKP1Q107X0 134 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 C4orf26Q17RF5 130 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 C11orf71Q6IPW1 123 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 DSCR8Q96T75 97 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 LINC00846Q9NV44 126 aa3.67□□□□□ -1.82
TPM1-222ENST00000560131 TRAV7A0A075B6U4 112 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3OR16-12A0A075B7B8 117 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 TRAV12-3A0A0B4J271 114 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 F6UB75 175 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 LYNX1G3V0Z9 82 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 LY6G6DO95868 133 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 IGHV3-53P01767 116 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 LYNX1P0DP58 116 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 PFN2P35080 140 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 SNRPD3P62318 126 aaKnown RBP3.66□□□□□ -1.82
TPM1-222ENST00000560131 KLRB1Q12918 225 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 HRCT1Q6UXD1 115 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 RANBP2P49792 3224 aaKnown RBP3.66□□□□□ -1.82
TPM1-222ENST00000560131 XIRP2A4UGR9 3374 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 NACAE9PAV3 2078 aa3.66□□□□□ -1.82
TPM1-222ENST00000560131 WNK2Q9Y3S1 2297 aa3.65□□□□□ -1.82
TPM1-222ENST00000560131 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
TPM1-222ENST00000560131 RBMY1BA6NDE4 496 aaKnown RBP3.65□□□□□ -1.83
TPM1-222ENST00000560131 RBMY1EA6NEQ0 496 aaKnown RBP3.65□□□□□ -1.83
TPM1-222ENST00000560131 H7BZZ5 65 aa3.65□□□□□ -1.83
TPM1-222ENST00000560131 RBMY1DP0C7P1 496 aaKnown RBP3.65□□□□□ -1.83
TPM1-222ENST00000560131 RBMY1A1P0DJD3 496 aaKnown RBP3.65□□□□□ -1.83
TPM1-222ENST00000560131 RBMY1CP0DJD4 496 aa3.65□□□□□ -1.83
TPM1-222ENST00000560131 XCL1P47992 114 aa3.65□□□□□ -1.83
TPM1-222ENST00000560131 RBMY1FQ15415 496 aaKnown RBP3.65□□□□□ -1.83
TPM1-222ENST00000560131 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.65□□□□□ -1.83
TPM1-222ENST00000560131 TMEM243Q9BU79 118 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms