RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 CRYBA4P53673 196 aa7.21□□□□□ -1.26
LRRC28-216ENST00000559819 COX6A2Q02221 97 aa7.21□□□□□ -1.26
LRRC28-216ENST00000559819 CDKN2A-AS1Q9UH64 79 aa7.21□□□□□ -1.26
LRRC28-216ENST00000559819 TRAV25A0A0B4J276 109 aa7.2□□□□□ -1.26
LRRC28-216ENST00000559819 FOXI1Q12951 378 aa7.2□□□□□ -1.26
LRRC28-216ENST00000559819 LYRM7Q5U5X0 104 aa7.2□□□□□ -1.26
LRRC28-216ENST00000559819 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
LRRC28-216ENST00000559819 ERG28Q9UKR5 140 aa7.2□□□□□ -1.26
LRRC28-216ENST00000559819 A0A0B4J2C4 111 aa7.2□□□□□ -1.26
LRRC28-216ENST00000559819 Q1RN00 199 aa7.2□□□□□ -1.26
LRRC28-216ENST00000559819 SETD2Q9BYW2 2564 aaPredicted RBP7.2□□□□□ -1.26
LRRC28-216ENST00000559819 KRTAP1-1Q07627 177 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 SMAGPQ0VAQ4 97 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 DGAT2L7PQ6IED9 249 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 DAND5Q8N907 189 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 CARD19Q96LW7 228 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 NOP10Q9NPE3 64 aaKnown RBP7.19□□□□□ -1.26
LRRC28-216ENST00000559819 YAE1D1Q9NRH1 226 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 GAGE12JA6NER3 117 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 RPL35AP18077 110 aaKnown RBP7.19□□□□□ -1.26
LRRC28-216ENST00000559819 GAGE4Q13068 117 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 GAGE5Q13069 117 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 LINC01006Q8NI28 216 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 SIGMAR1Q99720 223 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 SPATA25Q9BR10 227 aa7.19□□□□□ -1.26
LRRC28-216ENST00000559819 TRBV20-1A0A075B6N2 111 aa7.18□□□□□ -1.26
LRRC28-216ENST00000559819 GIG44P09565 113 aaPredicted RBP7.18□□□□□ -1.26
LRRC28-216ENST00000559819 PLA2G2AP14555 144 aa7.18□□□□□ -1.26
LRRC28-216ENST00000559819 NTM-AS1Q6ZSK4 140 aa7.18□□□□□ -1.26
LRRC28-216ENST00000559819 NIPBLQ6KC79 2804 aaeCLIP7.18□□□□□ -1.26
LRRC28-216ENST00000559819 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
LRRC28-216ENST00000559819 K7EQD1 137 aa7.18□□□□□ -1.26
LRRC28-216ENST00000559819 TMEM101Q96IK0 257 aa7.18□□□□□ -1.26
LRRC28-216ENST00000559819 TENM4Q6N022 2769 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 ANKRD29Q8N6D5 301 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 ATP6V0E2Q8NHE4 81 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 ACANP16112 2415 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 JMJD1CQ15652 2540 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 C9JAW5 83 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 MIAQ16674 131 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 ZFAND6Q6FIF0 208 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 SBSPONQ8IVN8 264 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 SPANXCQ9NY87 97 aa7.17□□□□□ -1.26
LRRC28-216ENST00000559819 LOC100131303A0A0U1RQF7 123 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 RPL36AP83881 106 aaKnown RBP7.16□□□□□ -1.26
LRRC28-216ENST00000559819 LINC00242Q5T6M2 205 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 TEN1Q86WV5 123 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 RPL36ALQ969Q0 106 aaKnown RBP7.16□□□□□ -1.26
LRRC28-216ENST00000559819 SETXQ7Z333 2677 aaKnown RBP7.16□□□□□ -1.26
LRRC28-216ENST00000559819 NOTCH3Q9UM47 2321 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 TRAV13-1A0A0B4J241 112 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 A0A0U1RRA0 63 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 TRIAP1O43715 76 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 GAGE7O76087 117 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 GAGE12FP0CL80 117 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 GAGE12GP0CL81 117 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 GAGE12IP0CL82 117 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 TIRAPP58753 221 aa7.16□□□□□ -1.26
LRRC28-216ENST00000559819 ZNF625Q96I27 306 aaPredicted RBP7.16□□□□□ -1.26
LRRC28-216ENST00000559819 IGLV5-45A0A087WSX0 123 aa7.15□□□□□ -1.26
LRRC28-216ENST00000559819 TRAV4A0A0B4J268 109 aa7.15□□□□□ -1.26
LRRC28-216ENST00000559819 PLAC8L1A1L4L8 177 aa7.15□□□□□ -1.26
LRRC28-216ENST00000559819 SLC25A20O43772 301 aa7.15□□□□□ -1.26
LRRC28-216ENST00000559819 TEX29Q8N6K0 151 aa7.15□□□□□ -1.26
LRRC28-216ENST00000559819 PPDPFLQ8WWR9 84 aa7.15□□□□□ -1.26
LRRC28-216ENST00000559819 CDIP1Q9H305 208 aa7.15□□□□□ -1.26
LRRC28-216ENST00000559819 C19orf73Q9NVV2 129 aa7.14□□□□□ -1.27
LRRC28-216ENST00000559819 MTORP42345 2549 aa7.14□□□□□ -1.27
LRRC28-216ENST00000559819 RNASE1P07998 156 aaKnown RBP7.14□□□□□ -1.27
LRRC28-216ENST00000559819 Q9H8V8 135 aa7.14□□□□□ -1.27
LRRC28-216ENST00000559819 PDZD2O15018 2839 aa7.14□□□□□ -1.27
LRRC28-216ENST00000559819 NDUFA1O15239 70 aa7.14□□□□□ -1.27
LRRC28-216ENST00000559819 ICOSQ9Y6W8 199 aa7.14□□□□□ -1.27
LRRC28-216ENST00000559819 TRGV2A0A075B6R0 118 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 TRBV10-1A0A0K0K1A3 114 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 IGLV1-51P01701 117 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 HERVK_113P63121 156 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 DAZ2Q13117 558 aaKnown RBP7.13□□□□□ -1.27
LRRC28-216ENST00000559819 DAZ4Q86SG3 579 aaKnown RBP7.13□□□□□ -1.27
LRRC28-216ENST00000559819 C16orf95Q9H693 158 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 DAZ3Q9NR90 486 aaKnown RBP7.13□□□□□ -1.27
LRRC28-216ENST00000559819 C2CD3Q4AC94 2353 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 SMIM1B2RUZ4 78 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 LINC01620Q4KN68 170 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 CDC42SE2Q9NRR3 84 aa7.13□□□□□ -1.27
LRRC28-216ENST00000559819 IGLV5-39A0A0G2JS06 123 aa7.12□□□□□ -1.27
LRRC28-216ENST00000559819 TRBV30A0A0K0K1B3 111 aa7.12□□□□□ -1.27
LRRC28-216ENST00000559819 ATXN8Q156A1 80 aa7.12□□□□□ -1.27
LRRC28-216ENST00000559819 SMR3AQ99954 134 aa7.12□□□□□ -1.27
LRRC28-216ENST00000559819 RPL13AP40429 203 aaKnown RBP7.12□□□□□ -1.27
LRRC28-216ENST00000559819 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
LRRC28-216ENST00000559819 CLEC2BQ92478 149 aa7.12□□□□□ -1.27
LRRC28-216ENST00000559819 C16orf74Q96GX8 76 aa7.12□□□□□ -1.27
LRRC28-216ENST00000559819 MT-ATP8P03928 68 aa7.11□□□□□ -1.27
LRRC28-216ENST00000559819 IGKV3OR2-268A0A0C4DH90 116 aa7.11□□□□□ -1.27
LRRC28-216ENST00000559819 UBE2L6O14933 153 aa7.11□□□□□ -1.27
LRRC28-216ENST00000559819 TIMM17BO60830 172 aa7.11□□□□□ -1.27
LRRC28-216ENST00000559819 NTN5Q8WTR8 489 aaPredicted RBP7.11□□□□□ -1.27
LRRC28-216ENST00000559819 GAGE6Q13070 117 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms