RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 TRAV8-3A0A0A6YYJ7 113 aa7.89□□□□□ -1.15
SPG11-217ENST00000559511 DAZ2Q13117 558 aaKnown RBP7.89□□□□□ -1.15
SPG11-217ENST00000559511 C10orf126Q8N4M7 172 aa7.89□□□□□ -1.15
SPG11-217ENST00000559511 C16orf74Q96GX8 76 aa7.89□□□□□ -1.15
SPG11-217ENST00000559511 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
SPG11-217ENST00000559511 TENM1Q9UKZ4 2725 aa7.89□□□□□ -1.15
SPG11-217ENST00000559511 TINCRA0A1B0GVN0 87 aa7.88□□□□□ -1.15
SPG11-217ENST00000559511 RNF151Q2KHN1 245 aa7.88□□□□□ -1.15
SPG11-217ENST00000559511 TIMM21Q9BVV7 248 aa7.88□□□□□ -1.15
SPG11-217ENST00000559511 TRBV10-1A0A0K0K1A3 114 aa7.88□□□□□ -1.15
SPG11-217ENST00000559511 APOMO95445 188 aa7.88□□□□□ -1.15
SPG11-217ENST00000559511 LINC00694P0DN24 101 aa7.88□□□□□ -1.15
SPG11-217ENST00000559511 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.88□□□□□ -1.15
SPG11-217ENST00000559511 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
SPG11-217ENST00000559511 GAGE7O76087 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 GAGE12FP0CL80 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 GAGE12GP0CL81 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 GAGE12IP0CL82 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 RPL36AP83881 106 aaKnown RBP7.87□□□□□ -1.15
SPG11-217ENST00000559511 NTM-AS1Q6ZSK4 140 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 RPL36ALQ969Q0 106 aaKnown RBP7.87□□□□□ -1.15
SPG11-217ENST00000559511 IGHV1-58A0A0C4DH39 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 A0A0J9YXY3 114 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 GAGE12JA6NER3 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 A8MZ25 164 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 H3BMG7 143 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 TSPAN13O95857 204 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 CFC1BP0CG36 223 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 CFC1P0CG37 223 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 UBE2D3P61077 147 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 UBE2D2P62837 147 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 GAGE4Q13068 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 GAGE5Q13069 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 GAGE13Q4V321 117 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 C1QTNF4Q9BXJ3 329 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 F8P00451 2351 aa7.87□□□□□ -1.15
SPG11-217ENST00000559511 SPINK8P0C7L1 97 aa7.86□□□□□ -1.15
SPG11-217ENST00000559511 VSIG2Q96IQ7 327 aa7.86□□□□□ -1.15
SPG11-217ENST00000559511 TEP1Q99973 2627 aaKnown RBP7.86□□□□□ -1.15
SPG11-217ENST00000559511 TRGV2A0A075B6R0 118 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 DAZ4Q86SG3 579 aaKnown RBP7.85□□□□□ -1.15
SPG11-217ENST00000559511 OVOL2Q9BRP0 275 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 DAZ3Q9NR90 486 aaKnown RBP7.85□□□□□ -1.15
SPG11-217ENST00000559511 LOC100131303A0A0U1RQF7 123 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 K7ERU9 68 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 DGAT2L7PQ6IED9 249 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 SFTA2Q6UW10 78 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 SBSPONQ8IVN8 264 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 CITED1Q99966 193 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 GEMIN7Q9H840 131 aaKnown RBP7.85□□□□□ -1.15
SPG11-217ENST00000559511 CDKN2A-AS1Q9UH64 79 aa7.85□□□□□ -1.15
SPG11-217ENST00000559511 NBEAL2Q6ZNJ1 2754 aa7.84□□□□□ -1.15
SPG11-217ENST00000559511 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
SPG11-217ENST00000559511 COX6A2Q02221 97 aa7.84□□□□□ -1.15
SPG11-217ENST00000559511 LITAFQ99732 161 aa7.84□□□□□ -1.15
SPG11-217ENST00000559511 ATRQ13535 2644 aa7.84□□□□□ -1.15
SPG11-217ENST00000559511 IGLV5-45A0A087WSX0 123 aa7.84□□□□□ -1.16
SPG11-217ENST00000559511 A4D1N5 150 aa7.84□□□□□ -1.16
SPG11-217ENST00000559511 TMEM238C9JI98 176 aa7.84□□□□□ -1.16
SPG11-217ENST00000559511 WFDC2Q14508 124 aa7.84□□□□□ -1.16
SPG11-217ENST00000559511 MUSTN1Q8IVN3 82 aa7.84□□□□□ -1.16
SPG11-217ENST00000559511 MTURNQ8N3F0 131 aa7.84□□□□□ -1.16
SPG11-217ENST00000559511 NDUFA12Q9UI09 145 aa7.84□□□□□ -1.16
SPG11-217ENST00000559511 TIRAPP58753 221 aa7.83□□□□□ -1.16
SPG11-217ENST00000559511 F8W1H4 67 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 INSL3P51460 131 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 LINC00242Q5T6M2 205 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 C9orf66Q5T8R8 295 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 PRO0461Q9UI25 63 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 CSDC2Q9Y534 153 aaKnown RBP7.82□□□□□ -1.16
SPG11-217ENST00000559511 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 ADAMTSL4-AS1Q5T5F5 129 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 PRO1854Q9UHT4 67 aa7.82□□□□□ -1.16
SPG11-217ENST00000559511 TRGV4A0A0C4DH28 118 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 G3V4G9 280 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 RPL24P83731 157 aaKnown RBP7.81□□□□□ -1.16
SPG11-217ENST00000559511 ZFAND6Q6FIF0 208 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 TMEM101Q96IK0 257 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 VPS25Q9BRG1 176 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 TRRAPQ9Y4A5 3859 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 TEX48A0A1B0GUV7 120 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 FHL2Q14192 279 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 CDC42SE2Q9NRR3 84 aa7.81□□□□□ -1.16
SPG11-217ENST00000559511 TRAV13-1A0A0B4J241 112 aa7.8□□□□□ -1.16
SPG11-217ENST00000559511 HERVK_113P63121 156 aa7.8□□□□□ -1.16
SPG11-217ENST00000559511 FAM19A3Q7Z5A8 133 aa7.8□□□□□ -1.16
SPG11-217ENST00000559511 TMEM243Q9BU79 118 aa7.8□□□□□ -1.16
SPG11-217ENST00000559511 PSMB2P49721 201 aa7.79□□□□□ -1.16
SPG11-217ENST00000559511 A0A0B4J2C4 111 aa7.79□□□□□ -1.16
SPG11-217ENST00000559511 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
SPG11-217ENST00000559511 UBE2L6O14933 153 aa7.79□□□□□ -1.16
SPG11-217ENST00000559511 SH2D6Q7Z4S9 175 aa7.79□□□□□ -1.16
SPG11-217ENST00000559511 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
SPG11-217ENST00000559511 SPANXCQ9NY87 97 aa7.79□□□□□ -1.16
SPG11-217ENST00000559511 NDUFA1O15239 70 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 IGHV3-33P01772 117 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 PRSS2P07478 247 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms