RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TRAV9-2A0A087WT02 112 aa9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 A0A087WX48 190 aa9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 IGIPA6NJ69 53 aa9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 RAB5BP61020 215 aa9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 COA6Q5JTJ3 125 aaKnown RBP9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 ENHOQ6UWT2 76 aa9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 C2orf66Q6UXQ4 117 aa9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 TMEM18Q96B42 140 aa9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 SPANXA1Q9NS26 97 aa9.94□□□□□ -0.82
SNRPA1-207ENST00000559309 LINC01549A6NIU2 74 aa9.93□□□□□ -0.82
SNRPA1-207ENST00000559309 TMEM262E9PQX1 116 aa9.93□□□□□ -0.82
SNRPA1-207ENST00000559309 UBE2L6O14933 153 aa9.93□□□□□ -0.82
SNRPA1-207ENST00000559309 Q6ZRN7 208 aaPredicted RBP9.93□□□□□ -0.82
SNRPA1-207ENST00000559309 FA2HQ7L5A8 372 aa9.93□□□□□ -0.82
SNRPA1-207ENST00000559309 G0S2P27469 103 aa9.92□□□□□ -0.82
SNRPA1-207ENST00000559309 PDZD11Q5EBL8 140 aa9.92□□□□□ -0.82
SNRPA1-207ENST00000559309 KRTAP26-1Q6PEX3 210 aa9.92□□□□□ -0.82
SNRPA1-207ENST00000559309 CYSLTR1Q9Y271 337 aa9.92□□□□□ -0.82
SNRPA1-207ENST00000559309 NUPR1O60356 82 aa9.91□□□□□ -0.82
SNRPA1-207ENST00000559309 SMAGPQ0VAQ4 97 aa9.91□□□□□ -0.82
SNRPA1-207ENST00000559309 TIMM17AQ99595 171 aa9.91□□□□□ -0.82
SNRPA1-207ENST00000559309 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
SNRPA1-207ENST00000559309 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.82
SNRPA1-207ENST00000559309 SERF1AO75920 110 aa9.9□□□□□ -0.82
SNRPA1-207ENST00000559309 ERASQ7Z444 233 aa9.9□□□□□ -0.82
SNRPA1-207ENST00000559309 LINC00269Q8N2A0 174 aa9.9□□□□□ -0.82
SNRPA1-207ENST00000559309 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.82
SNRPA1-207ENST00000559309 PKD1P98161 4303 aa9.9□□□□□ -0.82
SNRPA1-207ENST00000559309 C1orf196B1AJZ1 125 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 M0R2N4 97 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 HBDP02042 147 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 REG3AQ06141 175 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 MIAQ16674 131 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 AMMECR1LQ6DCA0 310 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 Q6ZUT4 128 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 LINC00173Q6ZV60 143 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 BAGE3Q86Y29 109 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 OR5A1Q8NGJ0 315 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 AMELXQ99217 191 aa9.89□□□□□ -0.83
SNRPA1-207ENST00000559309 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
SNRPA1-207ENST00000559309 RTL8CO15255 209 aa9.88□□□□□ -0.83
SNRPA1-207ENST00000559309 RNASEKQ6P5S7 137 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-207ENST00000559309 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
SNRPA1-207ENST00000559309 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
SNRPA1-207ENST00000559309 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
SNRPA1-207ENST00000559309 TMEM141Q96I45 108 aa9.87□□□□□ -0.83
SNRPA1-207ENST00000559309 OPRPNQ99935 248 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-207ENST00000559309 HECTD4Q9Y4D8 3996 aa9.87□□□□□ -0.83
SNRPA1-207ENST00000559309 TRAV8-4A0A0B4J246 113 aa9.86□□□□□ -0.83
SNRPA1-207ENST00000559309 PMCHL1Q16048 86 aa9.86□□□□□ -0.83
SNRPA1-207ENST00000559309 NFE4Q86UQ8 179 aa9.86□□□□□ -0.83
SNRPA1-207ENST00000559309 UBE2WQ96B02 151 aa9.86□□□□□ -0.83
SNRPA1-207ENST00000559309 CCL25O15444 150 aa9.85□□□□□ -0.83
SNRPA1-207ENST00000559309 C1orf134Q5TEV5 83 aa9.85□□□□□ -0.83
SNRPA1-207ENST00000559309 MAPKAPK5-AS1Q8N8E1 139 aa9.85□□□□□ -0.83
SNRPA1-207ENST00000559309 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
SNRPA1-207ENST00000559309 LINC00959A0A1B0GUT2 108 aa9.84□□□□□ -0.83
SNRPA1-207ENST00000559309 HSBP1O75506 76 aa9.84□□□□□ -0.83
SNRPA1-207ENST00000559309 DGAT2L7PQ6IED9 249 aa9.84□□□□□ -0.83
SNRPA1-207ENST00000559309 SCGB3A1Q96QR1 104 aa9.84□□□□□ -0.83
SNRPA1-207ENST00000559309 DNAH5Q8TE73 4624 aa9.83□□□□□ -0.84
SNRPA1-207ENST00000559309 CRPP02741 224 aa9.83□□□□□ -0.84
SNRPA1-207ENST00000559309 RNASE13Q5GAN3 156 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-207ENST00000559309 FAM19A2Q8N3H0 131 aa9.83□□□□□ -0.84
SNRPA1-207ENST00000559309 UBE2D1P51668 147 aa9.82□□□□□ -0.84
SNRPA1-207ENST00000559309 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
SNRPA1-207ENST00000559309 BAALCQ8WXS3 180 aa9.82□□□□□ -0.84
SNRPA1-207ENST00000559309 PACRGQ96M98 296 aaPredicted RBP9.82□□□□□ -0.84
SNRPA1-207ENST00000559309 COX11Q9Y6N1 276 aa9.82□□□□□ -0.84
SNRPA1-207ENST00000559309 RYR1P21817 5038 aa9.81□□□□□ -0.84
SNRPA1-207ENST00000559309 LRCOL1A6NCL2 159 aa9.81□□□□□ -0.84
SNRPA1-207ENST00000559309 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.81□□□□□ -0.84
SNRPA1-207ENST00000559309 PAPPA-AS1Q5QFB9 102 aa9.81□□□□□ -0.84
SNRPA1-207ENST00000559309 RMI2Q96E14 147 aa9.81□□□□□ -0.84
SNRPA1-207ENST00000559309 Q9HAA7 133 aa9.81□□□□□ -0.84
SNRPA1-207ENST00000559309 ATP5LO75964 103 aa9.8□□□□□ -0.84
SNRPA1-207ENST00000559309 FOXI1Q12951 378 aa9.8□□□□□ -0.84
SNRPA1-207ENST00000559309 ZC2HC1BQ5TFG8 222 aa9.8□□□□□ -0.84
SNRPA1-207ENST00000559309 TEX43Q6ZNM6 134 aa9.8□□□□□ -0.84
SNRPA1-207ENST00000559309 CHCHD10Q8WYQ3 142 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-207ENST00000559309 C1orf43Q9BWL3 253 aa9.8□□□□□ -0.84
SNRPA1-207ENST00000559309 TM2D2Q9BX73 214 aa9.8□□□□□ -0.84
SNRPA1-207ENST00000559309 IGHV3OR16-9A0A0B4J2B5 98 aa9.79□□□□□ -0.84
SNRPA1-207ENST00000559309 NDUFA6P56556 154 aa9.79□□□□□ -0.84
SNRPA1-207ENST00000559309 LINC00242Q5T6M2 205 aa9.79□□□□□ -0.84
SNRPA1-207ENST00000559309 VCX2Q9H322 139 aa9.79□□□□□ -0.84
SNRPA1-207ENST00000559309 CST9LQ9H4G1 147 aa9.79□□□□□ -0.84
SNRPA1-207ENST00000559309 IGLV10-54A0A075B6I4 117 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 IGKV2D-24A0A075B6R9 120 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 IFITM10A6NMD0 228 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 LEPROTL1O95214 131 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 PMVKQ15126 192 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 Q6ZN92 141 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 LINC00336Q6ZUF6 198 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 KIAA1109Q2LD37 5005 aa9.78□□□□□ -0.84
SNRPA1-207ENST00000559309 TRAV12-1A0A0B4J245 112 aa9.77□□□□□ -0.85
SNRPA1-207ENST00000559309 SS18Q15532 418 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms