RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 LOC107984640A0A0U1RRK4 108 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 EDN2P20800 178 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 TECTAO75443 2155 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 SPTBN2O15020 2390 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 IGHV4-30-2A0A087WSY4 118 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 M0QY20 66 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 MRPS36P82909 103 aaKnown RBP5.3□□□□□ -1.56
USP3-210ENST00000559192 Q6Q795 121 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 FAM19A3Q7Z5A8 133 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 Q6ZSV7 163 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 PSMG3-AS1Q96PY0 264 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 LINC00467Q9BRT7 94 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 TSHBP01222 138 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 EBI3Q14213 229 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 DIRC1Q969H9 104 aa5.3□□□□□ -1.56
USP3-210ENST00000559192 CREBBPQ92793 2442 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 LRCOL1A6NCL2 159 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 SERTAD4-AS1Q5TG53 156 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 LINC00526Q96FQ7 95 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 TRBV30A0A0K0K1B3 111 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 K7EQD1 137 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 PRM2P04554 102 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 CASC2Q6XLA1 102 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 GPHB5Q86YW7 130 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 ZNF580Q9UK33 172 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 DSCR9P59020 149 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 NRGNQ92686 78 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
USP3-210ENST00000559192 IGIPA6NJ69 53 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 UBE2D1P51668 147 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 C10orf99Q6UWK7 81 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 CDKN2A-AS1Q9UH64 79 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 H7C423 109 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 K7EMT4 169 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 UBE2D3P61077 147 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 UBE2D2P62837 147 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.28□□□□□ -1.561e-6■■■■□ 20.5
USP3-210ENST00000559192 COX8CQ7Z4L0 72 aa5.28□□□□□ -1.56
USP3-210ENST00000559192 KLK5Q9Y337 293 aaPredicted RBP5.28□□□□□ -1.56
USP3-210ENST00000559192 A6NDX4 124 aa5.27□□□□□ -1.57
USP3-210ENST00000559192 POLR2KP53803 58 aaKnown RBP5.27□□□□□ -1.57
USP3-210ENST00000559192 LMO4P61968 165 aa5.27□□□□□ -1.57
USP3-210ENST00000559192 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
USP3-210ENST00000559192 SLPIP03973 132 aa5.27□□□□□ -1.57
USP3-210ENST00000559192 IGLV10-54A0A075B6I4 117 aa5.27□□□□□ -1.57
USP3-210ENST00000559192 LINC01546A6NGU7 62 aa5.27□□□□□ -1.57
USP3-210ENST00000559192 MIFP14174 115 aa5.27□□□□□ -1.57
USP3-210ENST00000559192 SMCPP49901 116 aaPredicted RBP5.27□□□□□ -1.57
USP3-210ENST00000559192 CDSNQ15517 529 aa5.27□□□□□ -1.57
USP3-210ENST00000559192 GATA3P23771 443 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 C11orf71Q6IPW1 123 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 CRYGDP07320 174 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 IGKV2D-24A0A075B6R9 120 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 LINC00308Q8TCZ7 52 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 SPTAN1Q13813 2472 aaKnown RBP5.26□□□□□ -1.57
USP3-210ENST00000559192 ACACAQ13085 2346 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 A0A0J9YWU9 116 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 PSPHP1O15172 72 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 COX7BP24311 80 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 PRO3102Q9H379 93 aa5.26□□□□□ -1.57
USP3-210ENST00000559192 CACNA1BQ00975 2339 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 COL6A6A6NMZ7 2263 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 ARHGAP32A7KAX9 2087 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 WFDC10BQ8IUB3 73 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 RMI2Q96E14 147 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 PRO0461Q9UI25 63 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 FBXL19-AS1Q494R0 122 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 KLLNB2CW77 178 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 J3QLI3 93 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 CHD9Q3L8U1 2897 aa5.25□□□□□ -1.57
USP3-210ENST00000559192 MED13LQ71F56 2210 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 TRBV6-5A0A0K0K1A5 114 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 C19orf84I3L1E1 186 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 XIRP2A4UGR9 3374 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 LST1O00453 97 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 TIRAPP58753 221 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 K7EQG2 157 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 NDUFA1O15239 70 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 ADAMTSL4-AS1Q5T5F5 129 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 Q6JHZ5 121 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 POM121L12Q8N7R1 296 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 C9orf85Q96MD7 179 aa5.24□□□□□ -1.57
USP3-210ENST00000559192 CACNA1HO95180 2353 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 UBE2D4Q9Y2X8 147 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 ABCA4P78363 2273 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 ODF3Q96PU9 254 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 MAP6D1Q9H9H5 199 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 NANOS2P60321 138 aaKnown RBP5.23□□□□□ -1.57
USP3-210ENST00000559192 SPAG11BQ08648 103 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 Q8N9L7 120 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 Q96MF0 132 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 PTPRBP23467 1997 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 DCANP1Q8TF63 244 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 SZT2Q5T011 3432 aa5.23□□□□□ -1.57
USP3-210ENST00000559192 Q6ZTI0 123 aa5.22□□□□□ -1.57
USP3-210ENST00000559192 A0A087WVE0 104 aa5.21□□□□□ -1.57
USP3-210ENST00000559192 PYGO1Q9Y3Y4 419 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms