RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TRBV27A0A0K0K1C4 114 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 GEMIN2O14893 280 aaKnown RBP3.55□□□□□ -1.84
CASC4-208ENST00000559151 RER1O15258 196 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 HLA-DRB4P13762 266 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 DYNLT3P51808 116 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 KLRD1Q13241 179 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 ZNF720Q7Z2F6 126 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 COPS9Q8WXC6 57 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 SAR1AQ9NR31 198 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 CHCHD2Q9Y6H1 151 aaPredicted RBP3.55□□□□□ -1.84
CASC4-208ENST00000559151 HLA-DRB4X5D2U9 266 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 MYO18AQ92614 2054 aaKnown RBP3.55□□□□□ -1.84
CASC4-208ENST00000559151 NUP210LQ5VU65 1888 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 KIAA1549LQ6ZVL6 1849 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 AKAP9Q99996 3911 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 INTS1Q8N201 2190 aaKnown RBP3.54□□□□□ -1.84
CASC4-208ENST00000559151 TCRBV3S1A0A5B6 114 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 K7ERJ3 54 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 SLC25A5P05141 298 aaKnown RBP3.54□□□□□ -1.84
CASC4-208ENST00000559151 DYNLT1P63172 113 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 EIF5AL1Q6IS14 154 aaKnown RBP3.54□□□□□ -1.84
CASC4-208ENST00000559151 PHF5AQ7RTV0 110 aaKnown RBP3.54□□□□□ -1.84
CASC4-208ENST00000559151 C3orf56Q8N813 242 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 ATG5Q9H1Y0 275 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 BET1LQ9NYM9 111 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 AP4S1Q9Y587 144 aa3.54□□□□□ -1.84
CASC4-208ENST00000559151 MAP1AP78559 2803 aaPredicted RBP3.54□□□□□ -1.84
CASC4-208ENST00000559151 TRAV12-2A0A075B6T6 113 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 A0A0D9SFI3 127 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 UQCRQO14949 82 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 HIST1H2BKO60814 126 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 PROSCO94903 275 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 ANGP03950 147 aaKnown RBP3.53□□□□□ -1.84
CASC4-208ENST00000559151 HIST1H2BJP06899 126 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 IGLC1P0CG04 106 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 SNRPD3P62318 126 aaKnown RBP3.53□□□□□ -1.84
CASC4-208ENST00000559151 IQCJQ1A5X6 159 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 Q56UQ5 140 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 Q6AWC8 147 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 TEN1Q86WV5 123 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 ATOH7Q8N100 152 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 PRELID3AQ96N28 172 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 DCHS2Q6V1P9 2916 aa3.53□□□□□ -1.84
CASC4-208ENST00000559151 DENND4CQ5VZ89 1909 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 LINC00032P0C843 101 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 DCDP81605 110 aaKnown RBP3.52□□□□□ -1.85
CASC4-208ENST00000559151 DEFB113Q30KQ7 82 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 LINC00299Q6ZSB3 139 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 Q6ZUT4 128 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 MORN4Q8NDC4 146 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 OR5AK2Q8NH90 309 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 PSMF1Q92530 271 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 RAB37Q96AX2 223 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 LINC00526Q96FQ7 95 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 YPEL2Q96QA6 119 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 SEC11CQ9BY50 192 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 AGPAT4-IT1Q9H0P7 198 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 NBEAL1Q6ZS30 2694 aa3.52□□□□□ -1.85
CASC4-208ENST00000559151 APCP25054 2843 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 TRAV12-1A0A0B4J245 112 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 C3orf85A0A1B0GTC6 90 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 TMEM262E9PQX1 116 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 APOC4-APOC2K7ER74 178 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 APOC2P02655 101 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 PEA15Q15121 130 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 LINC01545Q5VT33 79 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 TMEM91Q6ZNR0 172 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 OTOSQ8NHW6 89 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 MCEEQ96PE7 176 aa3.51□□□□□ -1.85
CASC4-208ENST00000559151 ANKHD1Q8IWZ3 2542 aaKnown RBP3.5□□□□□ -1.85
CASC4-208ENST00000559151 CSMD2Q7Z408 3487 aa3.5□□□□□ -1.85
CASC4-208ENST00000559151 HIVEP3Q5T1R4 2406 aa3.5□□□□□ -1.85
CASC4-208ENST00000559151 APOC3P02656 99 aa3.5□□□□□ -1.85
CASC4-208ENST00000559151 SOSTDC1Q6X4U4 206 aa3.5□□□□□ -1.85
CASC4-208ENST00000559151 AQP10Q96PS8 301 aa3.5□□□□□ -1.85
CASC4-208ENST00000559151 S100A13Q99584 98 aa3.5□□□□□ -1.85
CASC4-208ENST00000559151 NPCDR1Q9BY65 106 aa3.5□□□□□ -1.85
CASC4-208ENST00000559151 ZFC3H1O60293 1989 aaKnown RBP3.5□□□□□ -1.85
CASC4-208ENST00000559151 OBSL1O75147 1896 aa3.5□□□□□ -1.85
CASC4-208ENST00000559151 CITO14578 2027 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 TRBV20-1A0A075B6N2 111 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 TRACP01848 142 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 HBDP02042 147 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 Q5BKY6 102 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 LINC00301Q8NCQ3 95 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 ZNF714Q96N38 554 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 LSM2Q9Y333 95 aaKnown RBP3.49□□□□□ -1.85
CASC4-208ENST00000559151 DNAJC15Q9Y5T4 150 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 SNURFQ9Y675 71 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 LINC00312Q9Y6C7 94 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 DOCK4Q8N1I0 1966 aa3.49□□□□□ -1.85
CASC4-208ENST00000559151 OOSP1A8MZH6 123 aa3.48□□□□□ -1.85
CASC4-208ENST00000559151 MCRIP1C9JLW8 97 aa3.48□□□□□ -1.85
CASC4-208ENST00000559151 H3BQ15 152 aa3.48□□□□□ -1.85
CASC4-208ENST00000559151 EDF1O60869 148 aaKnown RBP3.48□□□□□ -1.85
CASC4-208ENST00000559151 DEFA5Q01523 94 aa3.48□□□□□ -1.85
CASC4-208ENST00000559151 C10orf111Q8N326 155 aa3.48□□□□□ -1.85
CASC4-208ENST00000559151 S100ZQ8WXG8 99 aa3.48□□□□□ -1.85
CASC4-208ENST00000559151 SERP1Q9Y6X1 66 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms