RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MPV17L2Q567V2 206 aa9.08□□□□□ -0.96
SMAD3-207ENST00000558763 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
SMAD3-207ENST00000558763 CELA1Q9UNI1 258 aa9.08□□□□□ -0.96
SMAD3-207ENST00000558763 E9PLD3 99 aa9.08□□□□□ -0.96
SMAD3-207ENST00000558763 MIFP14174 115 aa9.08□□□□□ -0.96
SMAD3-207ENST00000558763 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
SMAD3-207ENST00000558763 SPATA25Q9BR10 227 aa9.08□□□□□ -0.96
SMAD3-207ENST00000558763 TM2D3Q9BRN9 247 aa9.08□□□□□ -0.96
SMAD3-207ENST00000558763 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
SMAD3-207ENST00000558763 A0A1B0GV90 55 aa9.07□□□□□ -0.96
SMAD3-207ENST00000558763 SIVA1O15304 175 aa9.07□□□□□ -0.96
SMAD3-207ENST00000558763 BATFQ16520 125 aa9.07□□□□□ -0.96
SMAD3-207ENST00000558763 PAPPA-AS1Q5QFB9 102 aa9.07□□□□□ -0.96
SMAD3-207ENST00000558763 B9D2Q9BPU9 175 aa9.07□□□□□ -0.96
SMAD3-207ENST00000558763 GTSF1LQ9H1H1 148 aa9.07□□□□□ -0.96
SMAD3-207ENST00000558763 FBN3Q75N90 2809 aa9.07□□□□□ -0.96
SMAD3-207ENST00000558763 DNAH9Q9NYC9 4486 aa9.07□□□□□ -0.96
SMAD3-207ENST00000558763 HUWE1Q7Z6Z7 4374 aaKnown RBP9.07□□□□□ -0.96
SMAD3-207ENST00000558763 A0A0J9YXV3 536 aa9.06□□□□□ -0.96
SMAD3-207ENST00000558763 MRPS36P82909 103 aaKnown RBP9.06□□□□□ -0.96
SMAD3-207ENST00000558763 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
SMAD3-207ENST00000558763 CHAC1Q9BUX1 264 aa9.06□□□□□ -0.96
SMAD3-207ENST00000558763 VCX2Q9H322 139 aa9.06□□□□□ -0.96
SMAD3-207ENST00000558763 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-207ENST00000558763 PRADC1Q9BSG0 188 aa9.06□□□□□ -0.96
SMAD3-207ENST00000558763 TRBV25-1A0A075B6N4 114 aa9.05□□□□□ -0.96
SMAD3-207ENST00000558763 TRAV8-6A0A0B4J262 113 aa9.04□□□□□ -0.96
SMAD3-207ENST00000558763 TSPEAR-AS2P59090 65 aa9.04□□□□□ -0.96
SMAD3-207ENST00000558763 HIGD1BQ9P298 99 aa9.04□□□□□ -0.96
SMAD3-207ENST00000558763 CSDC2Q9Y534 153 aaKnown RBP9.04□□□□□ -0.96
SMAD3-207ENST00000558763 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
SMAD3-207ENST00000558763 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
SMAD3-207ENST00000558763 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
SMAD3-207ENST00000558763 GYPEP15421 78 aa9.03□□□□□ -0.96
SMAD3-207ENST00000558763 UBE2D1P51668 147 aa9.03□□□□□ -0.96
SMAD3-207ENST00000558763 COL5A1-AS1Q5SY13 56 aa9.03□□□□□ -0.96
SMAD3-207ENST00000558763 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
SMAD3-207ENST00000558763 TRBV6-8A0A0A6YYG3 113 aa9.02□□□□□ -0.97
SMAD3-207ENST00000558763 TMEM97Q5BJF2 176 aa9.02□□□□□ -0.97
SMAD3-207ENST00000558763 TMEM243Q9BU79 118 aa9.02□□□□□ -0.97
SMAD3-207ENST00000558763 DAD1P61803 113 aa9.01□□□□□ -0.97
SMAD3-207ENST00000558763 HSD52Q0P140 79 aa9.01□□□□□ -0.97
SMAD3-207ENST00000558763 STAB2Q8WWQ8 2551 aa9.01□□□□□ -0.97
SMAD3-207ENST00000558763 A0A0J9YWU9 116 aa9.01□□□□□ -0.97
SMAD3-207ENST00000558763 MYMXA0A1B0GTQ4 84 aa9.01□□□□□ -0.97
SMAD3-207ENST00000558763 TINCRA0A1B0GVN0 87 aa9.01□□□□□ -0.97
SMAD3-207ENST00000558763 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
SMAD3-207ENST00000558763 SPART-AS1P0CW21 52 aa9□□□□□ -0.97
SMAD3-207ENST00000558763 FAM19A3Q7Z5A8 133 aa9□□□□□ -0.97
SMAD3-207ENST00000558763 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
SMAD3-207ENST00000558763 H7C423 109 aa8.99□□□□□ -0.97
SMAD3-207ENST00000558763 HERVK_113P61574 105 aa8.99□□□□□ -0.97
SMAD3-207ENST00000558763 C11orf68Q9H3H3 251 aaKnown RBP8.99□□□□□ -0.97
SMAD3-207ENST00000558763 PAX4O43316 350 aa8.99□□□□□ -0.97
SMAD3-207ENST00000558763 ATP5G1P05496 136 aa8.99□□□□□ -0.97
SMAD3-207ENST00000558763 ATP6V0E2Q8NHE4 81 aa8.99□□□□□ -0.97
SMAD3-207ENST00000558763 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
SMAD3-207ENST00000558763 ZNF815PA8K554 130 aa8.98□□□□□ -0.97
SMAD3-207ENST00000558763 LINC00242Q5T6M2 205 aa8.98□□□□□ -0.97
SMAD3-207ENST00000558763 DGAT2L7PQ6IED9 249 aa8.98□□□□□ -0.97
SMAD3-207ENST00000558763 Q6ZVH6 145 aa8.98□□□□□ -0.97
SMAD3-207ENST00000558763 J3QQQ9 107 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 NHLRC4P0CG21 123 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-207ENST00000558763 TIRAPP58753 221 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 COX6A2Q02221 97 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 C12orf74Q32Q52 190 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 OR5A1Q8NGJ0 315 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 IGLV4-60A0A075B6I1 120 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 A0A0J9YY99 117 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 K7EP13 123 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 LEPROTO15243 131 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 ZNF25P17030 456 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-207ENST00000558763 GAGE6Q13070 117 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 TGP01266 2768 aa8.97□□□□□ -0.97
SMAD3-207ENST00000558763 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
SMAD3-207ENST00000558763 TRAV26-1A0A087WT03 109 aa8.96□□□□□ -0.98
SMAD3-207ENST00000558763 TRAV8-3A0A0A6YYJ7 113 aa8.96□□□□□ -0.98
SMAD3-207ENST00000558763 TAX1BP3O14907 124 aa8.96□□□□□ -0.98
SMAD3-207ENST00000558763 UBE2L6O14933 153 aa8.96□□□□□ -0.98
SMAD3-207ENST00000558763 FXYD2P54710 66 aa8.96□□□□□ -0.98
SMAD3-207ENST00000558763 ORAOV1Q8WV07 137 aa8.96□□□□□ -0.98
SMAD3-207ENST00000558763 CDKN2A-AS1Q9UH64 79 aa8.96□□□□□ -0.98
SMAD3-207ENST00000558763 A0A096LPF7 62 aa8.95□□□□□ -0.98
SMAD3-207ENST00000558763 IGHV3-30-3P0DP02 117 aa8.95□□□□□ -0.98
SMAD3-207ENST00000558763 SEC11AP67812 179 aa8.95□□□□□ -0.98
SMAD3-207ENST00000558763 TM2D2Q9BX73 214 aa8.95□□□□□ -0.98
SMAD3-207ENST00000558763 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
SMAD3-207ENST00000558763 AMMECR1LQ6DCA0 310 aa8.95□□□□□ -0.98
SMAD3-207ENST00000558763 LINC00469Q8N7U9 141 aa8.95□□□□□ -0.98
SMAD3-207ENST00000558763 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
SMAD3-207ENST00000558763 TEX48A0A1B0GUV7 120 aa8.94□□□□□ -0.98
SMAD3-207ENST00000558763 F5H768 121 aa8.94□□□□□ -0.98
SMAD3-207ENST00000558763 CHCHD5Q9BSY4 110 aa8.94□□□□□ -0.98
SMAD3-207ENST00000558763 TRAV13-1A0A0B4J241 112 aa8.93□□□□□ -0.98
SMAD3-207ENST00000558763 SPINK8P0C7L1 97 aa8.93□□□□□ -0.98
SMAD3-207ENST00000558763 NANOS2P60321 138 aaKnown RBP8.93□□□□□ -0.98
SMAD3-207ENST00000558763 TAL2Q16559 108 aa8.93□□□□□ -0.98
SMAD3-207ENST00000558763 CEND1Q8N111 149 aa8.93□□□□□ -0.98
SMAD3-207ENST00000558763 C10orf126Q8N4M7 172 aa8.93□□□□□ -0.98
SMAD3-207ENST00000558763 C11orf45Q8TAV5 145 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms