RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 A0A0J9YY99 117 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 TRBV6-1A0A0K0K1D8 114 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 A0A1B0GWB2 263 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 GAGE12JA6NER3 117 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 GAGE4Q13068 117 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 RIGQ13278 110 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 PIK3CD-AS1Q5SR53 167 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 C1orf134Q5TEV5 83 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 PPDPFLQ8WWR9 84 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 PTH2Q96A98 100 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 ZC2HC1AQ96GY0 325 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 PRADC1Q9BSG0 188 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 SPANXDQ9BXN6 97 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 TMEM126AQ9H061 195 aa6.07□□□□□ -1.44
USP3-208ENST00000558285 IGHV3-16A0A0C4DH30 117 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 A8MWV9 139 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 M0QXV9 152 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 P01737 135 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 GCSHP23434 173 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 ZNF876PQ49A33 203 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 DGAT2L7PQ6IED9 249 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 Q86TA4 180 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 CHAC1Q9BUX1 264 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 MLST8Q9BVC4 326 aa6.06□□□□□ -1.44
USP3-208ENST00000558285 C19orf71A6NCJ1 209 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 IGHV3-53P01767 116 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 HBDP02042 147 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 GYPEP15421 78 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 PRSS3P2Q8NHM4 247 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 SGK494Q96LW2 274 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 NAA38Q9BRA0 125 aaKnown RBP6.05□□□□□ -1.44
USP3-208ENST00000558285 UPK3BQ9BT76 320 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 MDFICQ9P1T7 246 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 KMT2CQ8NEZ4 4911 aaKnown RBP6.05□□□□□ -1.44
USP3-208ENST00000558285 RHODO00212 210 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 FXYD2P54710 66 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 DAZAP1Q96EP5 407 aaKnown RBP6.05□□□□□ -1.44
USP3-208ENST00000558285 C8orf49Q96NF6 230 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 Q9H8V8 135 aa6.05□□□□□ -1.44
USP3-208ENST00000558285 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
USP3-208ENST00000558285 IGLV2-18A0A075B6J9 118 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 NBDYA0A0U1RRE5 68 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 A0A1B0GUT8 65 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 B5MCH6 92 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 M0R2N4 97 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 GNRH2O43555 120 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 IGLV2-11P01706 119 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 MT-ATP8P03928 68 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 EVI2AP22794 236 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 RHOHQ15669 191 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 CFAP126Q5VTH2 177 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 COX8CQ7Z4L0 72 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 MAP1LC3AQ9H492 121 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 PHLDA3Q9Y5J5 127 aa6.04□□□□□ -1.44
USP3-208ENST00000558285 SNAI2O43623 268 aa6.03□□□□□ -1.44
USP3-208ENST00000558285 LTAP01374 205 aa6.03□□□□□ -1.44
USP3-208ENST00000558285 ZFP2Q6ZN57 461 aa6.03□□□□□ -1.44
USP3-208ENST00000558285 TEN1Q86WV5 123 aa6.03□□□□□ -1.44
USP3-208ENST00000558285 C10orf126Q8N4M7 172 aa6.03□□□□□ -1.44
USP3-208ENST00000558285 IFI27L1Q96BM0 104 aa6.03□□□□□ -1.44
USP3-208ENST00000558285 C20orf78Q9BR46 151 aa6.03□□□□□ -1.44
USP3-208ENST00000558285 NHP2Q9NX24 153 aaKnown RBP6.03□□□□□ -1.44
USP3-208ENST00000558285 LINC00588Q9Y4M8 146 aa6.03□□□□□ -1.44
USP3-208ENST00000558285 TRBV6-4A0A1B0GX49 114 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 NCR2O95944 276 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 NMUP48645 174 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 XGP55808 180 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 CACNG7P62955 275 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 FHL2Q14192 279 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 C5orf47Q569G3 176 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 NFE4Q86UQ8 179 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 C6orf223Q8N319 242 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 SMIM20Q8N5G0 67 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 ZNRF2Q8NHG8 242 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 C9orf85Q96MD7 179 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 PRELID3AQ96N28 172 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 TRBV20-1A0A075B6N2 111 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 A0A096LPF7 62 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 LINC01546A6NGU7 62 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 SH2D1AO60880 128 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 ATP5LO75964 103 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 MED14OSP0DP75 135 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 NDUFV3P56181 108 aaKnown RBP6.02□□□□□ -1.45
USP3-208ENST00000558285 Q6ZR54 194 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 VSIG2Q96IQ7 327 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 PGLYRP4Q96LB8 373 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 LINC00479Q96M42 142 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 STARD9Q9P2P6 4700 aa6.02□□□□□ -1.45
USP3-208ENST00000558285 TRBV25-1A0A075B6N4 114 aa6.01□□□□□ -1.45
USP3-208ENST00000558285 A0A087WX48 190 aa6.01□□□□□ -1.45
USP3-208ENST00000558285 RS1O15537 224 aa6.01□□□□□ -1.45
USP3-208ENST00000558285 IFITM1P13164 125 aa6.01□□□□□ -1.45
USP3-208ENST00000558285 ZNF80P51504 273 aaPredicted RBP6.01□□□□□ -1.45
USP3-208ENST00000558285 TIRAPP58753 221 aa6.01□□□□□ -1.45
USP3-208ENST00000558285 GAGE2BQ13066 116 aa6.01□□□□□ -1.45
USP3-208ENST00000558285 TWIST1Q15672 202 aa6.01□□□□□ -1.45
USP3-208ENST00000558285 ESRGQ1W209 222 aa6.01□□□□□ -1.45
USP3-208ENST00000558285 GAGE2EQ4V326 116 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms