RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 COX7A2LO14548 114 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 IGHV4-59P01825 116 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 PYGO1Q9Y3Y4 419 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 NOTCH2Q04721 2471 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 IGHV7-81A0A0B4J1V7 117 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 IGHV3-66A0A0C4DH42 116 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 EEF1AKMT3Q96AZ1 226 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 TLN2Q9Y4G6 2542 aa8.02□□□□□ -1.13
USP3-206ENST00000558157 IGLV4-3A0A075B6K6 122 aa8.01□□□□□ -1.13
USP3-206ENST00000558157 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
USP3-206ENST00000558157 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
USP3-206ENST00000558157 ACANP16112 2415 aa8.01□□□□□ -1.13
USP3-206ENST00000558157 IGHV3-64A0A075B6Q5 118 aa8.01□□□□□ -1.13
USP3-206ENST00000558157 GNRH2O43555 120 aa8.01□□□□□ -1.13
USP3-206ENST00000558157 IGF1P05019 195 aa8.01□□□□□ -1.13
USP3-206ENST00000558157 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
USP3-206ENST00000558157 F5H697 171 aa8□□□□□ -1.13
USP3-206ENST00000558157 C20orf173Q96LM9 149 aa8□□□□□ -1.13
USP3-206ENST00000558157 SMR3AQ99954 134 aa8□□□□□ -1.13
USP3-206ENST00000558157 SPRY2O43597 315 aa8□□□□□ -1.13
USP3-206ENST00000558157 DAZ2Q13117 558 aaKnown RBP8□□□□□ -1.13
USP3-206ENST00000558157 DAZ4Q86SG3 579 aaKnown RBP8□□□□□ -1.13
USP3-206ENST00000558157 SERP2Q8N6R1 65 aa8□□□□□ -1.13
USP3-206ENST00000558157 VSIG2Q96IQ7 327 aa8□□□□□ -1.13
USP3-206ENST00000558157 CCDC140Q96MF4 163 aa8□□□□□ -1.13
USP3-206ENST00000558157 DAZ1Q9NQZ3 744 aaKnown RBP8□□□□□ -1.13
USP3-206ENST00000558157 DAZ3Q9NR90 486 aaKnown RBP8□□□□□ -1.13
USP3-206ENST00000558157 MXRA5Q9NR99 2828 aa8□□□□□ -1.13
USP3-206ENST00000558157 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
USP3-206ENST00000558157 ATP6V0E1O15342 81 aa7.99□□□□□ -1.13
USP3-206ENST00000558157 Q6YL49 198 aa7.99□□□□□ -1.13
USP3-206ENST00000558157 M0QY20 66 aa7.99□□□□□ -1.13
USP3-206ENST00000558157 ZNF415Q09FC8 603 aa7.99□□□□□ -1.13
USP3-206ENST00000558157 ECSCRQ19T08 205 aa7.99□□□□□ -1.13
USP3-206ENST00000558157 CLEC19AQ6UXS0 136 aa7.99□□□□□ -1.13
USP3-206ENST00000558157 OPRPNQ99935 248 aaPredicted RBP7.99□□□□□ -1.13
USP3-206ENST00000558157 TINCRA0A1B0GVN0 87 aa7.98□□□□□ -1.13
USP3-206ENST00000558157 SOCS3O14543 225 aa7.98□□□□□ -1.13
USP3-206ENST00000558157 DUX5Q96PT3 197 aa7.98□□□□□ -1.13
USP3-206ENST00000558157 SONP18583 2426 aaKnown RBP7.98□□□□□ -1.13
USP3-206ENST00000558157 IGHV3OR16-13A0A075B7E8 117 aa7.98□□□□□ -1.13
USP3-206ENST00000558157 IGHV3-74A0A0B4J1X5 117 aa7.98□□□□□ -1.13
USP3-206ENST00000558157 F5H768 121 aa7.98□□□□□ -1.13
USP3-206ENST00000558157 CIRBPQ14011 172 aaKnown RBP7.98□□□□□ -1.13
USP3-206ENST00000558157 TRAV41A0A0B4J266 112 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 KLLNB2CW77 178 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 LY6G6DO95868 133 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 BEAN1Q3B7T3 259 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 ZNF580Q9UK33 172 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 FLNBO75369 2602 aaKnown RBP7.97□□□□□ -1.13
USP3-206ENST00000558157 ADARB2-AS1A8MUL3 147 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 BAALC-AS2P0C853 105 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 TIRAPP58753 221 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 BLCAPP62952 87 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 UPK3BQ9BT76 320 aa7.97□□□□□ -1.13
USP3-206ENST00000558157 A0A087WWL8 130 aa7.96□□□□□ -1.14
USP3-206ENST00000558157 NDUFC2-KCTD14E9PQ53 114 aa7.96□□□□□ -1.14
USP3-206ENST00000558157 G3V318 75 aa7.96□□□□□ -1.14
USP3-206ENST00000558157 IGHV3-49A0A0A0MS15 119 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 NDUFA1O15239 70 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 CD28P10747 220 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 RPL11P62913 178 aaKnown RBP7.95□□□□□ -1.14
USP3-206ENST00000558157 Q6JHZ5 121 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 Q6ZSV7 163 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 IGHG2P01859 326 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 KIR2DL5BQ8NHK3 375 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 C9orf85Q96MD7 179 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 OVOL2Q9BRP0 275 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 JPT2Q9H910 190 aa7.95□□□□□ -1.14
USP3-206ENST00000558157 C19orf54Q5BKX5 351 aa7.94□□□□□ -1.14
USP3-206ENST00000558157 TRAV13-1A0A0B4J241 112 aa7.93□□□□□ -1.14
USP3-206ENST00000558157 Q5XG85 94 aa7.93□□□□□ -1.14
USP3-206ENST00000558157 MUC4Q99102 2169 aa7.93□□□□□ -1.14
USP3-206ENST00000558157 DNAJC9-AS1A6NH13 148 aa7.93□□□□□ -1.14
USP3-206ENST00000558157 FAM223BA6NKX1 122 aa7.93□□□□□ -1.14
USP3-206ENST00000558157 FAM223AQ8IWN6 122 aa7.93□□□□□ -1.14
USP3-206ENST00000558157 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
USP3-206ENST00000558157 DEFB104AQ8WTQ1 72 aa7.93□□□□□ -1.14
USP3-206ENST00000558157 NDUFA4O00483 81 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 FAM74A4Q5TZK3 123 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 TMEM86BQ8N661 226 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 C22orf24Q9Y442 160 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 NDUFC2O95298 119 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 DNAL4O96015 105 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 NPC2P61916 151 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 ZNF702PQ9H963 129 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 ESM1Q9NQ30 184 aa7.92□□□□□ -1.14
USP3-206ENST00000558157 PF4P02776 101 aa7.91□□□□□ -1.14
USP3-206ENST00000558157 MALP21145 153 aa7.91□□□□□ -1.14
USP3-206ENST00000558157 FAM104AQ969W3 186 aa7.91□□□□□ -1.14
USP3-206ENST00000558157 CYSTM1Q9H1C7 97 aa7.91□□□□□ -1.14
USP3-206ENST00000558157 HIVEP1P15822 2718 aa7.91□□□□□ -1.14
USP3-206ENST00000558157 IGHV3-16A0A0C4DH30 117 aa7.91□□□□□ -1.14
USP3-206ENST00000558157 C4orf26Q17RF5 130 aa7.91□□□□□ -1.14
USP3-206ENST00000558157 CUBNO60494 3623 aa7.91□□□□□ -1.14
USP3-206ENST00000558157 SETXQ7Z333 2677 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms