RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 NCOR2Q9Y618 2525 aa7.99□□□□□ -1.13
SEMA4B-204ENST00000558065 FAM208BQ5VWN6 2430 aa7.99□□□□□ -1.13
SEMA4B-204ENST00000558065 E7EQL1 145 aa7.98□□□□□ -1.13
SEMA4B-204ENST00000558065 DGAT2L7PQ6IED9 249 aa7.98□□□□□ -1.13
SEMA4B-204ENST00000558065 CTSGP08311 255 aa7.98□□□□□ -1.13
SEMA4B-204ENST00000558065 ACACBO00763 2458 aa7.98□□□□□ -1.13
SEMA4B-204ENST00000558065 PRB3Q04118 309 aaPredicted RBP7.98□□□□□ -1.13
SEMA4B-204ENST00000558065 Q6ZRP5 223 aa7.98□□□□□ -1.13
SEMA4B-204ENST00000558065 Q1T7F1 81 aa7.97□□□□□ -1.13
SEMA4B-204ENST00000558065 SMAD5-AS1Q9Y6J3 95 aa7.97□□□□□ -1.13
SEMA4B-204ENST00000558065 TRANK1O15050 2925 aa7.97□□□□□ -1.13
SEMA4B-204ENST00000558065 IGHV1-18A0A0C4DH31 117 aa7.97□□□□□ -1.13
SEMA4B-204ENST00000558065 NCR3O14931 201 aa7.97□□□□□ -1.13
SEMA4B-204ENST00000558065 C15orf32Q32M92 178 aa7.97□□□□□ -1.13
SEMA4B-204ENST00000558065 C9orf106Q8NAJ2 232 aa7.97□□□□□ -1.13
SEMA4B-204ENST00000558065 PTPRQQ9UMZ3 2332 aa7.97□□□□□ -1.13
SEMA4B-204ENST00000558065 COL27A1Q8IZC6 1860 aaPredicted RBP7.96□□□□□ -1.13
SEMA4B-204ENST00000558065 IGHV3OR16-13A0A075B7E8 117 aa7.96□□□□□ -1.14
SEMA4B-204ENST00000558065 IGHV3-74A0A0B4J1X5 117 aa7.96□□□□□ -1.14
SEMA4B-204ENST00000558065 PIK3CD-AS1Q5SR53 167 aa7.96□□□□□ -1.14
SEMA4B-204ENST00000558065 Q6ZTC4 211 aa7.96□□□□□ -1.14
SEMA4B-204ENST00000558065 LINC00308Q8TCZ7 52 aa7.96□□□□□ -1.14
SEMA4B-204ENST00000558065 SOCS3O14543 225 aa7.95□□□□□ -1.14
SEMA4B-204ENST00000558065 KALRNO60229 2985 aa7.95□□□□□ -1.14
SEMA4B-204ENST00000558065 PPP1R17O96001 155 aa7.95□□□□□ -1.14
SEMA4B-204ENST00000558065 ZZEF1O43149 2961 aa7.95□□□□□ -1.14
SEMA4B-204ENST00000558065 IGHV3-23P01764 117 aa7.95□□□□□ -1.14
SEMA4B-204ENST00000558065 A0A087WYN8 130 aa7.94□□□□□ -1.14
SEMA4B-204ENST00000558065 TNRC18O15417 2968 aaPredicted RBP7.94□□□□□ -1.14
SEMA4B-204ENST00000558065 IGHV4OR15-8A0A075B7B6 117 aa7.94□□□□□ -1.14
SEMA4B-204ENST00000558065 A0A087WW49 117 aa7.94□□□□□ -1.14
SEMA4B-204ENST00000558065 LINC00574Q9H8X3 128 aa7.94□□□□□ -1.14
SEMA4B-204ENST00000558065 PHLDA3Q9Y5J5 127 aa7.94□□□□□ -1.14
SEMA4B-204ENST00000558065 LINC00315P59091 139 aa7.93□□□□□ -1.14
SEMA4B-204ENST00000558065 EYSQ5T1H1 3165 aa7.93□□□□□ -1.14
SEMA4B-204ENST00000558065 MUC4Q99102 2169 aa7.93□□□□□ -1.14
SEMA4B-204ENST00000558065 K7EIM0 57 aa7.93□□□□□ -1.14
SEMA4B-204ENST00000558065 C11orf72Q8NBR9 251 aa7.93□□□□□ -1.14
SEMA4B-204ENST00000558065 ANKHD1Q8IWZ3 2542 aaKnown RBP7.93□□□□□ -1.14
SEMA4B-204ENST00000558065 IGKV3-15P01624 115 aa7.93□□□□□ -1.14
SEMA4B-204ENST00000558065 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 IGHV3-66A0A0C4DH42 116 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 GAFA1Q96PS6 74 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 IGHV3-49A0A0A0MS15 119 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 IGKV3-7A0A075B6H7 116 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 VCYO14598 125 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 FAM104AQ969W3 186 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 KIF25-AS1Q9Y6Z4 181 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 CELSR3Q9NYQ7 3312 aa7.92□□□□□ -1.14
SEMA4B-204ENST00000558065 PIEZO1Q92508 2521 aa7.91□□□□□ -1.14
SEMA4B-204ENST00000558065 PRR9Q5T870 116 aa7.91□□□□□ -1.14
SEMA4B-204ENST00000558065 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
SEMA4B-204ENST00000558065 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
SEMA4B-204ENST00000558065 NOTCH2Q04721 2471 aa7.91□□□□□ -1.14
SEMA4B-204ENST00000558065 IGHV1-46P01743 117 aa7.91□□□□□ -1.14
SEMA4B-204ENST00000558065 Q6ZVQ6 151 aa7.9□□□□□ -1.14
SEMA4B-204ENST00000558065 BBC3Q96PG8 261 aaPredicted RBP7.9□□□□□ -1.14
SEMA4B-204ENST00000558065 TMEM256-PLSCR3K7ERE1 68 aa7.9□□□□□ -1.15
SEMA4B-204ENST00000558065 hDV103S1A0JD37 113 aa7.89□□□□□ -1.15
SEMA4B-204ENST00000558065 REV3LO60673 3130 aa7.89□□□□□ -1.15
SEMA4B-204ENST00000558065 PSPHP1O15172 72 aa7.89□□□□□ -1.15
SEMA4B-204ENST00000558065 ECSCRQ19T08 205 aa7.89□□□□□ -1.15
SEMA4B-204ENST00000558065 CLEC19AQ6UXS0 136 aa7.89□□□□□ -1.15
SEMA4B-204ENST00000558065 TMEM254Q8TBM7 123 aa7.89□□□□□ -1.15
SEMA4B-204ENST00000558065 A0A1W2PNU3 283 aaPredicted RBP7.89□□□□□ -1.15
SEMA4B-204ENST00000558065 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
SEMA4B-204ENST00000558065 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
SEMA4B-204ENST00000558065 CD28P10747 220 aa7.88□□□□□ -1.15
SEMA4B-204ENST00000558065 CSPG4Q6UVK1 2322 aa7.88□□□□□ -1.15
SEMA4B-204ENST00000558065 NDUFA1O15239 70 aa7.88□□□□□ -1.15
SEMA4B-204ENST00000558065 SUMO4Q6EEV6 95 aa7.88□□□□□ -1.15
SEMA4B-204ENST00000558065 CHD8Q9HCK8 2581 aa7.88□□□□□ -1.15
SEMA4B-204ENST00000558065 SYCNQ0VAF6 134 aa7.88□□□□□ -1.15
SEMA4B-204ENST00000558065 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.88□□□□□ -1.15
SEMA4B-204ENST00000558065 SPTBN4Q9H254 2564 aa7.87□□□□□ -1.15
SEMA4B-204ENST00000558065 LINC01356Q8N9X3 169 aa7.87□□□□□ -1.15
SEMA4B-204ENST00000558065 OVOL2Q9BRP0 275 aa7.87□□□□□ -1.15
SEMA4B-204ENST00000558065 ESM1Q9NQ30 184 aa7.87□□□□□ -1.15
SEMA4B-204ENST00000558065 CSMD1Q96PZ7 3565 aa7.87□□□□□ -1.15
SEMA4B-204ENST00000558065 TRAV22A0A0B4J277 110 aa7.87□□□□□ -1.15
SEMA4B-204ENST00000558065 KHDC1LQ5JSQ8 128 aa7.87□□□□□ -1.15
SEMA4B-204ENST00000558065 ANKRD11Q6UB99 2663 aaPredicted RBP7.87□□□□□ -1.15
SEMA4B-204ENST00000558065 CLPSL1A2RUU4 121 aa7.86□□□□□ -1.15
SEMA4B-204ENST00000558065 PHF5AQ7RTV0 110 aaKnown RBP7.86□□□□□ -1.15
SEMA4B-204ENST00000558065 C20orf203Q8NBC4 194 aa7.86□□□□□ -1.15
SEMA4B-204ENST00000558065 FUSP35637 526 aaKnown RBP eCLIP7.86□□□□□ -1.15
SEMA4B-204ENST00000558065 FAM74A4Q5TZK3 123 aa7.86□□□□□ -1.15
SEMA4B-204ENST00000558065 Q8N6K4 173 aa7.86□□□□□ -1.15
SEMA4B-204ENST00000558065 LRCOL1A6NCL2 159 aa7.85□□□□□ -1.15
SEMA4B-204ENST00000558065 F8W735 103 aaPredicted RBP7.85□□□□□ -1.15
SEMA4B-204ENST00000558065 LINC01560Q8TB33 94 aa7.85□□□□□ -1.15
SEMA4B-204ENST00000558065 UBL5Q9BZL1 73 aa7.85□□□□□ -1.15
SEMA4B-204ENST00000558065 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
SEMA4B-204ENST00000558065 IGHV1-8P0DP01 117 aa7.85□□□□□ -1.15
SEMA4B-204ENST00000558065 SPATA3Q8NHX4 192 aa7.85□□□□□ -1.15
SEMA4B-204ENST00000558065 DYNLRB2Q8TF09 96 aa7.85□□□□□ -1.15
SEMA4B-204ENST00000558065 IGHV1-3A0A0C4DH29 117 aa7.84□□□□□ -1.15
SEMA4B-204ENST00000558065 NDUFS5O43920 106 aa7.84□□□□□ -1.15
SEMA4B-204ENST00000558065 RNASE3P12724 160 aaKnown RBP7.84□□□□□ -1.15
SEMA4B-204ENST00000558065 UBE2BP63146 152 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms