RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TEX43Q6ZNM6 134 aa11.54□□□□□ -0.56
SNX1-203ENST00000558040 Q6ZUT4 128 aa11.54□□□□□ -0.56
SNX1-203ENST00000558040 WFDC10BQ8IUB3 73 aa11.54□□□□□ -0.56
SNX1-203ENST00000558040 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
SNX1-203ENST00000558040 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
SNX1-203ENST00000558040 VCX2Q9H322 139 aa11.54□□□□□ -0.56
SNX1-203ENST00000558040 H0Y8G0 127 aa11.53□□□□□ -0.56
SNX1-203ENST00000558040 C3orf84H3BNL1 204 aa11.53□□□□□ -0.56
SNX1-203ENST00000558040 AKR1D1P51857 326 aa11.53□□□□□ -0.56
SNX1-203ENST00000558040 PMVKQ15126 192 aa11.53□□□□□ -0.56
SNX1-203ENST00000558040 PET117Q6UWS5 81 aa11.53□□□□□ -0.56
SNX1-203ENST00000558040 OPRPNQ99935 248 aaPredicted RBP11.53□□□□□ -0.56
SNX1-203ENST00000558040 C2orf88Q9BSF0 95 aa11.53□□□□□ -0.56
SNX1-203ENST00000558040 CDC42SE2Q9NRR3 84 aa11.53□□□□□ -0.56
SNX1-203ENST00000558040 IGLV4-60A0A075B6I1 120 aa11.52□□□□□ -0.57
SNX1-203ENST00000558040 TRAV12-1A0A0B4J245 112 aa11.52□□□□□ -0.57
SNX1-203ENST00000558040 LOC105371267A0A1B0GV96 52 aa11.52□□□□□ -0.57
SNX1-203ENST00000558040 C20orf202A1L168 122 aa11.52□□□□□ -0.57
SNX1-203ENST00000558040 SPATA12Q7Z6I5 190 aa11.52□□□□□ -0.57
SNX1-203ENST00000558040 Q8N976 141 aa11.52□□□□□ -0.57
SNX1-203ENST00000558040 SIVA1O15304 175 aa11.51□□□□□ -0.57
SNX1-203ENST00000558040 LINC01556Q5JQF7 62 aa11.51□□□□□ -0.57
SNX1-203ENST00000558040 AMELXQ99217 191 aa11.51□□□□□ -0.57
SNX1-203ENST00000558040 ANGP03950 147 aaKnown RBP11.5□□□□□ -0.57
SNX1-203ENST00000558040 DNAH10OSP0CZ25 163 aa11.5□□□□□ -0.57
SNX1-203ENST00000558040 RNASE13Q5GAN3 156 aaKnown RBP11.5□□□□□ -0.57
SNX1-203ENST00000558040 FAM104AQ969W3 186 aa11.5□□□□□ -0.57
SNX1-203ENST00000558040 CST9LQ9H4G1 147 aa11.5□□□□□ -0.57
SNX1-203ENST00000558040 PRSS29PA6NIE9 313 aa11.49□□□□□ -0.57
SNX1-203ENST00000558040 IGHV3-30P01768 117 aa11.49□□□□□ -0.57
SNX1-203ENST00000558040 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
SNX1-203ENST00000558040 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
SNX1-203ENST00000558040 IGHV3-30-5P0DP03 117 aa11.49□□□□□ -0.57
SNX1-203ENST00000558040 CASC10Q5T4H9 136 aa11.49□□□□□ -0.57
SNX1-203ENST00000558040 LGALS9CQ6DKI2 356 aa11.49□□□□□ -0.57
SNX1-203ENST00000558040 Q8N3U1 123 aa11.48□□□□□ -0.57
SNX1-203ENST00000558040 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
SNX1-203ENST00000558040 ODF1Q14990 250 aa11.47□□□□□ -0.57
SNX1-203ENST00000558040 ZC2HC1BQ5TFG8 222 aa11.47□□□□□ -0.57
SNX1-203ENST00000558040 LINC01545Q5VT33 79 aa11.47□□□□□ -0.57
SNX1-203ENST00000558040 Q9H8V8 135 aa11.47□□□□□ -0.57
SNX1-203ENST00000558040 F8VRH5 84 aa11.46□□□□□ -0.57
SNX1-203ENST00000558040 SCGB1D1O95968 90 aa11.46□□□□□ -0.57
SNX1-203ENST00000558040 LINC00269Q8N2A0 174 aa11.46□□□□□ -0.57
SNX1-203ENST00000558040 KLK12Q9UKR0 248 aa11.46□□□□□ -0.57
SNX1-203ENST00000558040 TRAV9-2A0A087WT02 112 aa11.45□□□□□ -0.58
SNX1-203ENST00000558040 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
SNX1-203ENST00000558040 K7EP13 123 aa11.45□□□□□ -0.58
SNX1-203ENST00000558040 CRPP02741 224 aa11.45□□□□□ -0.58
SNX1-203ENST00000558040 SEC11AP67812 179 aa11.45□□□□□ -0.58
SNX1-203ENST00000558040 REG3AQ06141 175 aa11.45□□□□□ -0.58
SNX1-203ENST00000558040 JOSD1Q15040 202 aaPredicted RBP11.45□□□□□ -0.58
SNX1-203ENST00000558040 C10orf126Q8N4M7 172 aa11.45□□□□□ -0.58
SNX1-203ENST00000558040 TRAV13-1A0A0B4J241 112 aa11.44□□□□□ -0.58
SNX1-203ENST00000558040 CCL25O15444 150 aa11.44□□□□□ -0.58
SNX1-203ENST00000558040 PLNP26678 52 aa11.44□□□□□ -0.58
SNX1-203ENST00000558040 UBE2D1P51668 147 aa11.44□□□□□ -0.58
SNX1-203ENST00000558040 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
SNX1-203ENST00000558040 MRPL35Q9NZE8 188 aaKnown RBP11.44□□□□□ -0.58
SNX1-203ENST00000558040 DPM2O94777 84 aa11.43□□□□□ -0.58
SNX1-203ENST00000558040 SS18Q15532 418 aa11.43□□□□□ -0.58
SNX1-203ENST00000558040 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
SNX1-203ENST00000558040 PMCHL2Q9BQD1 86 aa11.43□□□□□ -0.58
SNX1-203ENST00000558040 DNAH7Q8WXX0 4024 aa11.43□□□□□ -0.58
SNX1-203ENST00000558040 LINC00959A0A1B0GUT2 108 aa11.42□□□□□ -0.58
SNX1-203ENST00000558040 IGKCP01834 107 aa11.42□□□□□ -0.58
SNX1-203ENST00000558040 IGLC3P0DOY3 106 aa11.42□□□□□ -0.58
SNX1-203ENST00000558040 FAM19A3Q7Z5A8 133 aa11.42□□□□□ -0.58
SNX1-203ENST00000558040 UBE2WQ96B02 151 aa11.42□□□□□ -0.58
SNX1-203ENST00000558040 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
SNX1-203ENST00000558040 IGLV4-69A0A075B6H9 119 aa11.41□□□□□ -0.58
SNX1-203ENST00000558040 A0A0J9YXV3 536 aa11.41□□□□□ -0.58
SNX1-203ENST00000558040 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
SNX1-203ENST00000558040 HERVK_113P63121 156 aa11.41□□□□□ -0.58
SNX1-203ENST00000558040 PYY3Q5JQD4 70 aa11.41□□□□□ -0.58
SNX1-203ENST00000558040 NFE4Q86UQ8 179 aa11.41□□□□□ -0.58
SNX1-203ENST00000558040 CHAC1Q9BUX1 264 aa11.41□□□□□ -0.58
SNX1-203ENST00000558040 DYNC2H1Q8NCM8 4307 aaKnown RBP11.41□□□□□ -0.58
SNX1-203ENST00000558040 TRAV8-4A0A0B4J246 113 aa11.4□□□□□ -0.58
SNX1-203ENST00000558040 MIAQ16674 131 aa11.4□□□□□ -0.58
SNX1-203ENST00000558040 TTC32Q5I0X7 151 aa11.4□□□□□ -0.58
SNX1-203ENST00000558040 ENHOQ6UWT2 76 aa11.4□□□□□ -0.58
SNX1-203ENST00000558040 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
SNX1-203ENST00000558040 SMIM6P0DI80 62 aa11.39□□□□□ -0.59
SNX1-203ENST00000558040 LINC00242Q5T6M2 205 aa11.39□□□□□ -0.59
SNX1-203ENST00000558040 TGP01266 2768 aa11.38□□□□□ -0.59
SNX1-203ENST00000558040 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
SNX1-203ENST00000558040 C11orf86A6NJI1 115 aa11.38□□□□□ -0.59
SNX1-203ENST00000558040 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
SNX1-203ENST00000558040 ATOH7Q8N100 152 aa11.37□□□□□ -0.59
SNX1-203ENST00000558040 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
SNX1-203ENST00000558040 H3BRM9 83 aa11.36□□□□□ -0.59
SNX1-203ENST00000558040 XCL1P47992 114 aa11.36□□□□□ -0.59
SNX1-203ENST00000558040 LINC00469Q8N7U9 141 aa11.36□□□□□ -0.59
SNX1-203ENST00000558040 RMI2Q96E14 147 aa11.36□□□□□ -0.59
SNX1-203ENST00000558040 IGLV10-54A0A075B6I4 117 aa11.35□□□□□ -0.59
SNX1-203ENST00000558040 IGLV5-45A0A087WSX0 123 aa11.35□□□□□ -0.59
SNX1-203ENST00000558040 HSBP1L1C9JCN9 74 aa11.35□□□□□ -0.59
SNX1-203ENST00000558040 LY6G6CO95867 125 aa11.35□□□□□ -0.59
SNX1-203ENST00000558040 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms