RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BKO60814 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 CRPP02741 224 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BJP06899 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BOP23527 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BBP33778 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BDP58876 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BCP62807 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST2H2BEQ16778 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BHQ93079 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BNQ99877 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 HIST1H2BMQ99879 126 aa10.23□□□□□ -0.77
NEDD1-213ENST00000557644 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
NEDD1-213ENST00000557644 TRAV8-3A0A0A6YYJ7 113 aa10.22□□□□□ -0.77
NEDD1-213ENST00000557644 Q6ZRN7 208 aaPredicted RBP10.22□□□□□ -0.77
NEDD1-213ENST00000557644 ZNF664Q8N3J9 261 aa10.22□□□□□ -0.77
NEDD1-213ENST00000557644 TIMM21Q9BVV7 248 aa10.22□□□□□ -0.77
NEDD1-213ENST00000557644 A0A096LNJ9 63 aa10.22□□□□□ -0.77
NEDD1-213ENST00000557644 LINC00310P59036 64 aa10.22□□□□□ -0.77
NEDD1-213ENST00000557644 RAB5BP61020 215 aa10.22□□□□□ -0.77
NEDD1-213ENST00000557644 TOMM6Q96B49 74 aa10.22□□□□□ -0.77
NEDD1-213ENST00000557644 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
NEDD1-213ENST00000557644 DNAH17Q9UFH2 4485 aa10.21□□□□□ -0.77
NEDD1-213ENST00000557644 FAT2Q9NYQ8 4349 aa10.21□□□□□ -0.77
NEDD1-213ENST00000557644 IGLV10-54A0A075B6I4 117 aa10.21□□□□□ -0.78
NEDD1-213ENST00000557644 IGKV2D-24A0A075B6R9 120 aa10.2□□□□□ -0.78
NEDD1-213ENST00000557644 IGIPA6NJ69 53 aa10.2□□□□□ -0.78
NEDD1-213ENST00000557644 SERF1AO75920 110 aa10.2□□□□□ -0.78
NEDD1-213ENST00000557644 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
NEDD1-213ENST00000557644 NUPR1O60356 82 aa10.19□□□□□ -0.78
NEDD1-213ENST00000557644 SMAGPQ0VAQ4 97 aa10.19□□□□□ -0.78
NEDD1-213ENST00000557644 CHCHD1Q96BP2 118 aaKnown RBP10.19□□□□□ -0.78
NEDD1-213ENST00000557644 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
NEDD1-213ENST00000557644 MIAQ16674 131 aa10.19□□□□□ -0.78
NEDD1-213ENST00000557644 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
NEDD1-213ENST00000557644 G0S2P27469 103 aa10.18□□□□□ -0.78
NEDD1-213ENST00000557644 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
NEDD1-213ENST00000557644 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
NEDD1-213ENST00000557644 FAM19A2Q8N3H0 131 aa10.18□□□□□ -0.78
NEDD1-213ENST00000557644 SCGB3A1Q96QR1 104 aa10.18□□□□□ -0.78
NEDD1-213ENST00000557644 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
NEDD1-213ENST00000557644 C1orf196B1AJZ1 125 aa10.17□□□□□ -0.78
NEDD1-213ENST00000557644 HBDP02042 147 aa10.17□□□□□ -0.78
NEDD1-213ENST00000557644 MAPKAPK5-AS1Q8N8E1 139 aa10.17□□□□□ -0.78
NEDD1-213ENST00000557644 LINC00959A0A1B0GUT2 108 aa10.17□□□□□ -0.78
NEDD1-213ENST00000557644 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
NEDD1-213ENST00000557644 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
NEDD1-213ENST00000557644 HSBP1O75506 76 aa10.16□□□□□ -0.78
NEDD1-213ENST00000557644 TNP2Q05952 138 aa10.16□□□□□ -0.78
NEDD1-213ENST00000557644 ERASQ7Z444 233 aa10.16□□□□□ -0.78
NEDD1-213ENST00000557644 PSCAO43653 123 aa10.16□□□□□ -0.78
NEDD1-213ENST00000557644 KRTAP26-1Q6PEX3 210 aa10.16□□□□□ -0.78
NEDD1-213ENST00000557644 TIMM17AQ99595 171 aa10.16□□□□□ -0.78
NEDD1-213ENST00000557644 RMI2Q96E14 147 aa10.15□□□□□ -0.78
NEDD1-213ENST00000557644 TRAV8-4A0A0B4J246 113 aa10.15□□□□□ -0.79
NEDD1-213ENST00000557644 LINC00173Q6ZV60 143 aa10.15□□□□□ -0.79
NEDD1-213ENST00000557644 TM2D2Q9BX73 214 aa10.15□□□□□ -0.79
NEDD1-213ENST00000557644 PDZD11Q5EBL8 140 aa10.14□□□□□ -0.79
NEDD1-213ENST00000557644 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
NEDD1-213ENST00000557644 IFITM10A6NMD0 228 aa10.14□□□□□ -0.79
NEDD1-213ENST00000557644 XCL1P47992 114 aa10.14□□□□□ -0.79
NEDD1-213ENST00000557644 Q6ZN92 141 aa10.14□□□□□ -0.79
NEDD1-213ENST00000557644 TEX43Q6ZNM6 134 aa10.14□□□□□ -0.79
NEDD1-213ENST00000557644 AMELXQ99217 191 aa10.14□□□□□ -0.79
NEDD1-213ENST00000557644 VCX2Q9H322 139 aa10.14□□□□□ -0.79
NEDD1-213ENST00000557644 PRSS29PA6NIE9 313 aa10.13□□□□□ -0.79
NEDD1-213ENST00000557644 CCL25O15444 150 aa10.13□□□□□ -0.79
NEDD1-213ENST00000557644 LINC01549A6NIU2 74 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 LECT2O14960 151 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 NDUFA6P56556 154 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 WFDC2Q14508 124 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 COX11Q9Y6N1 276 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 GAGE12HA6NDE8 117 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.12□□□□□ -0.79
NEDD1-213ENST00000557644 NPSP0C0P6 89 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 SS18Q15532 418 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 BAALCQ8WXS3 180 aa10.12□□□□□ -0.79
NEDD1-213ENST00000557644 LRCOL1A6NCL2 159 aa10.11□□□□□ -0.79
NEDD1-213ENST00000557644 LINC00336Q6ZUF6 198 aa10.1□□□□□ -0.79
NEDD1-213ENST00000557644 PKD1P98161 4303 aa10.1□□□□□ -0.79
NEDD1-213ENST00000557644 DNAH11Q96DT5 4516 aa10.1□□□□□ -0.79
NEDD1-213ENST00000557644 FOXI1Q12951 378 aa10.1□□□□□ -0.79
NEDD1-213ENST00000557644 PAPPA-AS1Q5QFB9 102 aa10.1□□□□□ -0.79
NEDD1-213ENST00000557644 C2orf88Q9BSF0 95 aa10.1□□□□□ -0.79
NEDD1-213ENST00000557644 A0A087WTM6 91 aa10.09□□□□□ -0.79
NEDD1-213ENST00000557644 UBE2D1P51668 147 aa10.09□□□□□ -0.79
NEDD1-213ENST00000557644 COA6Q5JTJ3 125 aaKnown RBP10.09□□□□□ -0.79
NEDD1-213ENST00000557644 FABP4P15090 132 aa10.09□□□□□ -0.79
NEDD1-213ENST00000557644 LINC00242Q5T6M2 205 aa10.09□□□□□ -0.79
NEDD1-213ENST00000557644 ATP5LO75964 103 aa10.08□□□□□ -0.8
NEDD1-213ENST00000557644 COX6A2Q02221 97 aa10.08□□□□□ -0.8
NEDD1-213ENST00000557644 CD164L2Q6UWJ8 174 aa10.08□□□□□ -0.8
NEDD1-213ENST00000557644 CST9LQ9H4G1 147 aa10.08□□□□□ -0.8
NEDD1-213ENST00000557644 HECTD4Q9Y4D8 3996 aa10.08□□□□□ -0.8
NEDD1-213ENST00000557644 LEPROTL1O95214 131 aa10.08□□□□□ -0.8
NEDD1-213ENST00000557644 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
NEDD1-213ENST00000557644 PMVKQ15126 192 aa10.07□□□□□ -0.8
NEDD1-213ENST00000557644 PKHD1P08F94 4074 aa10.06□□□□□ -0.8
NEDD1-213ENST00000557644 A0A0J9YXV3 536 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms