RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 HMGN2P05204 90 aaKnown RBP2.66□□□□□ -1.98
PRPF39-212ENST00000557477 GYPBP06028 91 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 ASAH2BP0C7U1 165 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 UBE2L3P68036 154 aaKnown RBP2.66□□□□□ -1.98
PRPF39-212ENST00000557477 CCL8P80075 99 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 DAZ4Q86SG3 579 aaKnown RBP2.66□□□□□ -1.98
PRPF39-212ENST00000557477 GPX7Q96SL4 187 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-212ENST00000557477 MGST2Q99735 147 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 TXNDC17Q9BRA2 123 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 ZNF286AQ9HBT8 521 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 DAZ1Q9NQZ3 744 aaKnown RBP2.66□□□□□ -1.98
PRPF39-212ENST00000557477 OTORQ9NRC9 128 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 NHP2Q9NX24 153 aaKnown RBP2.66□□□□□ -1.98
PRPF39-212ENST00000557477 HHLA3Q9XRX5 114 aa2.66□□□□□ -1.98
PRPF39-212ENST00000557477 AMMECR1Q9Y4X0 333 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV40A0A0B4J280 105 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 hADV29S1A0JD25 119 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 PGPA6NDG6 321 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 H3BT86 120 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 CST7O76096 145 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 TCL1BO95988 128 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 IL4P05112 153 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 CTLA4P16410 223 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 COL8A2P25067 703 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 FXYD2P54710 66 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 RPS11P62280 158 aaKnown RBP eCLIP2.65□□□□□ -1.99
PRPF39-212ENST00000557477 RPL30P62888 115 aaKnown RBP2.65□□□□□ -1.99
PRPF39-212ENST00000557477 HBG1P69891 147 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 HBG2P69892 147 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 SERF2P84101 59 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 LGALS9BQ3B8N2 356 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 MDP1Q86V88 176 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 CCL17Q92583 94 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 ODF3Q96PU9 254 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 PRSS27Q9BQR3 290 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 C16orf95Q9H693 158 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 LINC00527Q9UJ94 153 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 EPDR1Q9UM22 224 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 LY96Q9Y6Y9 160 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 FREM1Q5H8C1 2179 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 DYSFO75923 2080 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 ANK3Q12955 4377 aaKnown RBP2.65□□□□□ -1.99
PRPF39-212ENST00000557477 MGAM2Q2M2H8 2515 aa2.65□□□□□ -1.99
PRPF39-212ENST00000557477 IGHV3-72A0A0B4J1Y9 119 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 TRBV7-6A0A0J9YX20 115 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 TCRBV4S1A1TA0A5B7 111 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 K7ERJ3 54 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 FFAR1O14842 300 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 IGHV3-11P01762 117 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 TCRAP04437 139 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 CCL1P22362 96 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 GCHFRP30047 84 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 SUPT4H1P63272 117 aaKnown RBP2.64□□□□□ -1.99
PRPF39-212ENST00000557477 MRPS36P82909 103 aaKnown RBP2.64□□□□□ -1.99
PRPF39-212ENST00000557477 QRFPP83859 136 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 ZNF816Q0VGE8 651 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-212ENST00000557477 TMEM170BQ5T4T1 132 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 LINC00305Q7Z4B0 112 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 RNF182Q8N6D2 247 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 LINC01600Q96MT4 127 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 NMNAT3Q96T66 252 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 DPH3P1Q9H4G8 78 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 NXT2Q9NPJ8 142 aaKnown RBP2.64□□□□□ -1.99
PRPF39-212ENST00000557477 RBM12B-AS1Q9P1G2 102 aa2.64□□□□□ -1.99
PRPF39-212ENST00000557477 MALRD1Q5VYJ5 2156 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 IGHV7-4-1A0A0J9YVY3 117 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 CTXND1A0A1B0GTU2 59 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 CLPSL1A2RUU4 121 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 LINC01619G3V211 115 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 SYNGR2O43760 224 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 PPYP01298 95 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 ACYP1P07311 99 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 MGST1P10620 155 aaKnown RBP2.63□□□□□ -1.99
PRPF39-212ENST00000557477 PSMB2P49721 201 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 C1orf140Q5VVS0 124 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 LGALS9CQ6DKI2 356 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 BRD3OSQ6XYD6 125 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 SLC22A24Q8N4F4 322 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 LY6G5BQ8NDX9 201 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 OR5C1Q8NGR4 320 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 C11orf1Q9H5F2 150 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 ANAPC10Q9UM13 185 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 TIMM9Q9Y5J7 89 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 TGP01266 2768 aa2.63□□□□□ -1.99
PRPF39-212ENST00000557477 SVEP1Q4LDE5 3571 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 TENM1Q9UKZ4 2725 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 IGHV1-58A0A0C4DH39 117 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 CRYM-AS1A6NIL9 109 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 LGALS9O00182 355 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 SLC25A20O43772 301 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 NPYP01303 97 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 DYNLT3P51808 116 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 UBE2D3P61077 147 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 UBE2D2P62837 147 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 ZNF56Q15929 161 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 LY6EQ16553 131 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 DEFB121Q5J5C9 76 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 SCGB1D4Q6XE38 83 aa2.62□□□□□ -1.99
PRPF39-212ENST00000557477 CLECL1Q8IZS7 167 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms