RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NMES1Q9C002 83 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 AGPAT4-IT1Q9H0P7 198 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 C11orf1Q9H5F2 150 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 FAT3Q8TDW7 4589 aa3.87□□□□□ -1.79
VPS33B-207ENST00000557470 DNAH8Q96JB1 4490 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 TRBV19A0A075B6N1 114 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 IBA57-AS1B1ANH7 110 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 C9JCJ5 164 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 ZNF253O75346 499 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 OR5AL1P0C617 328 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 HIST1H1EP10412 219 aaKnown RBP3.86□□□□□ -1.79
VPS33B-207ENST00000557470 CTRLP40313 264 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 RPL18AQ02543 176 aaKnown RBP3.86□□□□□ -1.79
VPS33B-207ENST00000557470 SPATA45Q537H7 98 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 MUC21Q5SSG8 566 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 TMEM78Q5T7P6 136 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 AMMECR1LQ6DCA0 310 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 UFSP1Q6NVU6 142 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 SCXQ7RTU7 201 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 CMTM2Q8TAZ6 248 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 BLNKQ8WV28 456 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 LINC00477Q96M19 166 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 C9orf85Q96MD7 179 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 PMCHL2Q9BQD1 86 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 TXNDC17Q9BRA2 123 aa3.86□□□□□ -1.79
VPS33B-207ENST00000557470 IGKV2-40A0A087WW87 121 aaPredicted RBP3.85□□□□□ -1.79
VPS33B-207ENST00000557470 K7EP34 96 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 TAX1BP3O14907 124 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 LECT2O14960 151 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 HMGB3O15347 200 aaKnown RBP3.85□□□□□ -1.79
VPS33B-207ENST00000557470 IGKV2D-40P01614 121 aaPredicted RBP3.85□□□□□ -1.79
VPS33B-207ENST00000557470 IGHV3-30P01768 117 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 IGHV3-33P01772 117 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 PRSS1P07477 247 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 IGHV3-30-3P0DP02 117 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 IGHV3-30-5P0DP03 117 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 HINT1P49773 126 aaPredicted RBP3.85□□□□□ -1.79
VPS33B-207ENST00000557470 PMVKQ15126 192 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 ZNF726P1Q15940 193 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 TMEM97Q5BJF2 176 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 MIC13Q5XKP0 118 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 C9orf47Q6ZRZ4 202 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 EXOC3-AS1Q8N2X6 119 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 OR10G7Q8NGN6 311 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 Q8TAT8 98 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 PPP1R1CQ8WVI7 109 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 NDFIP1Q9BT67 221 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 PARLQ9H300 379 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 CYTL1Q9NRR1 136 aa3.85□□□□□ -1.79
VPS33B-207ENST00000557470 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.84□□□□□ -1.79
VPS33B-207ENST00000557470 TRAV4A0A0B4J268 109 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 RBFOX3A6NFN3 312 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 FABP5P3A8MUU1 101 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 C9JQL5 133 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 C17orf112F2Z3M2 114 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 PYYP10082 97 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 PDE6HQ13956 83 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 TDRG1Q3Y452 100 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 FAM162BQ5T6X4 162 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 DPPA3Q6W0C5 159 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 SH2D6Q7Z4S9 175 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 C11orf52Q96A22 123 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 C2orf50Q96LR7 162 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 CHAC1Q9BUX1 264 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 SMIM3Q9BZL3 60 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 ST20Q9HBF5 79 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 SLC39A9Q9NUM3 307 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 TMEM14CQ9P0S9 112 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 ZNF492Q9P255 531 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 TIMM9Q9Y5J7 89 aa3.84□□□□□ -1.79
VPS33B-207ENST00000557470 LRP2P98164 4655 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 TRAV9-1A0A075B6T8 112 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 A0A087WX48 190 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 TRAV8-6A0A0B4J262 113 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 IGHV3-16A0A0C4DH30 117 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 A0A1B0GX51 115 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 A0A1W2PRE2 83 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 H3BRM9 83 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 ZNF138P52744 262 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
VPS33B-207ENST00000557470 ZNF506Q5JVG8 444 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 CIRBP-AS1Q8TBR5 109 aa3.83□□□□□ -1.8
VPS33B-207ENST00000557470 WDR61Q9GZS3 305 aaKnown RBP3.83□□□□□ -1.8
VPS33B-207ENST00000557470 UBE2L5PA0A1B0GUS4 154 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 FAM240AA0A1B0GVK7 77 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 ZNF727A8MUV8 499 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 F8W1H4 67 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 TMEM250H0YL14 139 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 J3KT08 172 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 M0R2P5 195 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 CST7O76096 145 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 SRP19P09132 144 aaKnown RBP3.82□□□□□ -1.8
VPS33B-207ENST00000557470 SPINK8P0C7L1 97 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 KIAA1644Q3SXP7 199 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 LELP1Q5T871 98 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 Q6AWC8 147 aa3.82□□□□□ -1.8
VPS33B-207ENST00000557470 SLC25A29Q8N8R3 303 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms