RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 CACNG7P62955 275 aa7.7□□□□□ -1.18
RTN1-208ENST00000557422 RPL36AP83881 106 aaKnown RBP7.7□□□□□ -1.18
RTN1-208ENST00000557422 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
RTN1-208ENST00000557422 RPL36ALQ969Q0 106 aaKnown RBP7.7□□□□□ -1.18
RTN1-208ENST00000557422 TRBV7-3A0A075B6L6 115 aa7.69□□□□□ -1.18
RTN1-208ENST00000557422 TRBV10-1A0A0K0K1A3 114 aa7.69□□□□□ -1.18
RTN1-208ENST00000557422 LOC105371267A0A1B0GV96 52 aa7.69□□□□□ -1.18
RTN1-208ENST00000557422 H3BVH4 76 aa7.69□□□□□ -1.18
RTN1-208ENST00000557422 ARMS2P0C7Q2 107 aa7.69□□□□□ -1.18
RTN1-208ENST00000557422 CHTF8P0CG12 524 aa7.69□□□□□ -1.18
RTN1-208ENST00000557422 CAMPP49913 170 aa7.69□□□□□ -1.18
RTN1-208ENST00000557422 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
RTN1-208ENST00000557422 CNBPP62633 177 aaKnown RBP7.69□□□□□ -1.18
RTN1-208ENST00000557422 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
RTN1-208ENST00000557422 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
RTN1-208ENST00000557422 TPPP3Q9BW30 176 aa7.68□□□□□ -1.18
RTN1-208ENST00000557422 PRR34Q9NV39 138 aa7.68□□□□□ -1.18
RTN1-208ENST00000557422 PLAC8Q9NZF1 115 aa7.68□□□□□ -1.18
RTN1-208ENST00000557422 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
RTN1-208ENST00000557422 IGHV3-64A0A075B6Q5 118 aa7.67□□□□□ -1.18
RTN1-208ENST00000557422 GRIFINA4D1Z8 144 aa7.67□□□□□ -1.18
RTN1-208ENST00000557422 NDUFA6P56556 154 aa7.67□□□□□ -1.18
RTN1-208ENST00000557422 SNRPEP62304 92 aaKnown RBP7.67□□□□□ -1.18
RTN1-208ENST00000557422 TWIST1Q15672 202 aa7.67□□□□□ -1.18
RTN1-208ENST00000557422 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
RTN1-208ENST00000557422 C7orf33Q8WU49 177 aa7.67□□□□□ -1.18
RTN1-208ENST00000557422 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
RTN1-208ENST00000557422 TMEM191AQ9H0A3 160 aa7.67□□□□□ -1.18
RTN1-208ENST00000557422 hDV102S1A0JD36 115 aa7.66□□□□□ -1.18
RTN1-208ENST00000557422 SLPIP03973 132 aa7.66□□□□□ -1.18
RTN1-208ENST00000557422 NTF3P20783 257 aa7.66□□□□□ -1.18
RTN1-208ENST00000557422 CLPSL2Q6UWE3 100 aa7.66□□□□□ -1.18
RTN1-208ENST00000557422 PKIAP61925 76 aa7.65□□□□□ -1.18
RTN1-208ENST00000557422 SPANXN1Q5VSR9 72 aa7.65□□□□□ -1.18
RTN1-208ENST00000557422 FAM104BQ5XKR9 115 aa7.65□□□□□ -1.18
RTN1-208ENST00000557422 LINC00269Q8N2A0 174 aa7.65□□□□□ -1.18
RTN1-208ENST00000557422 PHLDA3Q9Y5J5 127 aa7.65□□□□□ -1.18
RTN1-208ENST00000557422 M0R381 172 aa7.64□□□□□ -1.19
RTN1-208ENST00000557422 PPBPP02775 128 aa7.64□□□□□ -1.19
RTN1-208ENST00000557422 ESDP10768 282 aa7.64□□□□□ -1.19
RTN1-208ENST00000557422 RBX1P62877 108 aa7.64□□□□□ -1.19
RTN1-208ENST00000557422 PRR3P79522 188 aaKnown RBP7.64□□□□□ -1.19
RTN1-208ENST00000557422 NEXN-AS1Q8NBZ9 246 aa7.64□□□□□ -1.19
RTN1-208ENST00000557422 ALKBH7Q9BT30 221 aaPredicted RBP7.64□□□□□ -1.19
RTN1-208ENST00000557422 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.63□□□□□ -1.19
RTN1-208ENST00000557422 KIAA1644Q3SXP7 199 aa7.63□□□□□ -1.19
RTN1-208ENST00000557422 NTM-AS1Q6ZSK4 140 aa7.63□□□□□ -1.19
RTN1-208ENST00000557422 BAGE3Q86Y29 109 aa7.63□□□□□ -1.19
RTN1-208ENST00000557422 HIST3H2BBQ8N257 126 aa7.63□□□□□ -1.19
RTN1-208ENST00000557422 OR10AG1Q8NH19 301 aa7.63□□□□□ -1.19
RTN1-208ENST00000557422 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
RTN1-208ENST00000557422 AP5S1Q9NUS5 200 aa7.63□□□□□ -1.19
RTN1-208ENST00000557422 LAMTOR2Q9Y2Q5 125 aa7.63□□□□□ -1.19
RTN1-208ENST00000557422 IGLV10-54A0A075B6I4 117 aa7.62□□□□□ -1.19
RTN1-208ENST00000557422 S100A2P29034 98 aa7.62□□□□□ -1.19
RTN1-208ENST00000557422 GAGE6Q13070 117 aa7.62□□□□□ -1.19
RTN1-208ENST00000557422 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
RTN1-208ENST00000557422 ORMDL3Q8N138 153 aa7.62□□□□□ -1.19
RTN1-208ENST00000557422 PACRGQ96M98 296 aaPredicted RBP7.62□□□□□ -1.19
RTN1-208ENST00000557422 RAB4AP20338 218 aa7.61□□□□□ -1.19
RTN1-208ENST00000557422 REG3AQ06141 175 aa7.61□□□□□ -1.19
RTN1-208ENST00000557422 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
RTN1-208ENST00000557422 C18orf32Q8TCD1 76 aa7.61□□□□□ -1.19
RTN1-208ENST00000557422 MUC21A0A0G2JKD1 596 aa7.6□□□□□ -1.19
RTN1-208ENST00000557422 MUC21A0A140T8X8 626 aa7.6□□□□□ -1.19
RTN1-208ENST00000557422 COX6A2Q02221 97 aa7.6□□□□□ -1.19
RTN1-208ENST00000557422 MRPL51Q4U2R6 128 aaKnown RBP7.6□□□□□ -1.19
RTN1-208ENST00000557422 TMEM97Q5BJF2 176 aa7.6□□□□□ -1.19
RTN1-208ENST00000557422 AMN1Q8IY45 258 aa7.6□□□□□ -1.19
RTN1-208ENST00000557422 TMEM18Q96B42 140 aa7.6□□□□□ -1.19
RTN1-208ENST00000557422 MRAP2Q96G30 205 aa7.6□□□□□ -1.19
RTN1-208ENST00000557422 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
RTN1-208ENST00000557422 LPAP08519 4548 aa7.59□□□□□ -1.19
RTN1-208ENST00000557422 PPP1R17O96001 155 aa7.59□□□□□ -1.19
RTN1-208ENST00000557422 CKS2P33552 79 aa7.59□□□□□ -1.19
RTN1-208ENST00000557422 SRSF9Q13242 221 aaKnown RBP eCLIP7.59□□□□□ -1.19
RTN1-208ENST00000557422 ZNF56Q15929 161 aa7.59□□□□□ -1.19
RTN1-208ENST00000557422 MAJINQ3KP22 176 aa7.59□□□□□ -1.19
RTN1-208ENST00000557422 CHCHD1Q96BP2 118 aaKnown RBP7.59□□□□□ -1.19
RTN1-208ENST00000557422 TRBV25-1A0A075B6N4 114 aa7.58□□□□□ -1.2
RTN1-208ENST00000557422 TRAV8-4A0A0B4J246 113 aa7.58□□□□□ -1.2
RTN1-208ENST00000557422 D6R8Y8 96 aa7.58□□□□□ -1.2
RTN1-208ENST00000557422 SERF1AO75920 110 aa7.58□□□□□ -1.2
RTN1-208ENST00000557422 SMIM17P0DL12 118 aa7.58□□□□□ -1.2
RTN1-208ENST00000557422 PMCHP20382 165 aa7.58□□□□□ -1.2
RTN1-208ENST00000557422 SSTP61278 116 aa7.58□□□□□ -1.2
RTN1-208ENST00000557422 PRELID3AQ96N28 172 aa7.58□□□□□ -1.2
RTN1-208ENST00000557422 IGKV2-24A0A0C4DH68 120 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 IFITM10A6NMD0 228 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 PRSS47A8MTI9 375 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 LINC00614P0C842 121 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 AKR1D1P51857 326 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 STPG4Q8N801 248 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 C20orf203Q8NBC4 194 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 PRSS3P2Q8NHM4 247 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 HIST1H2BLQ99880 126 aa7.57□□□□□ -1.2
RTN1-208ENST00000557422 LINC00310P59036 64 aa7.56□□□□□ -1.2
RTN1-208ENST00000557422 IQCJQ1A5X6 159 aa7.56□□□□□ -1.2
RTN1-208ENST00000557422 IGLV4-60A0A075B6I1 120 aa7.55□□□□□ -1.2
RTN1-208ENST00000557422 IGHV1-24A0A0C4DH33 117 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms