RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.11□□□□□ -0.15
FOXA1-205ENST00000557418 CDPF1Q6NVV7 123 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 FA2HQ7L5A8 372 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BHQ93079 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BNQ99877 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 HIST1H2BMQ99879 126 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 Q9HAA7 133 aa14.11□□□□□ -0.15
FOXA1-205ENST00000557418 PKIAP61925 76 aa14.1□□□□□ -0.15
FOXA1-205ENST00000557418 RBX1P62877 108 aa14.1□□□□□ -0.15
FOXA1-205ENST00000557418 MAPKAPK5-AS1Q8N8E1 139 aa14.1□□□□□ -0.15
FOXA1-205ENST00000557418 A0A1B0GUV1 79 aa14.09□□□□□ -0.15
FOXA1-205ENST00000557418 TMEM262E9PQX1 116 aa14.09□□□□□ -0.15
FOXA1-205ENST00000557418 UBE2L6O14933 153 aa14.09□□□□□ -0.15
FOXA1-205ENST00000557418 RPL39P62891 51 aaKnown RBP14.09□□□□□ -0.15
FOXA1-205ENST00000557418 MRPL52Q86TS9 123 aaKnown RBP14.09□□□□□ -0.15
FOXA1-205ENST00000557418 FGF6P10767 208 aa14.08□□□□□ -0.16
FOXA1-205ENST00000557418 LINC00310P59036 64 aa14.08□□□□□ -0.16
FOXA1-205ENST00000557418 Q8N976 141 aa14.08□□□□□ -0.16
FOXA1-205ENST00000557418 AP5S1Q9NUS5 200 aa14.08□□□□□ -0.16
FOXA1-205ENST00000557418 UBE2D4Q9Y2X8 147 aa14.08□□□□□ -0.16
FOXA1-205ENST00000557418 APOBP04114 4563 aaKnown RBP14.07□□□□□ -0.16
FOXA1-205ENST00000557418 IGLV4-60A0A075B6I1 120 aa14.07□□□□□ -0.16
FOXA1-205ENST00000557418 A0A087WX48 190 aa14.07□□□□□ -0.16
FOXA1-205ENST00000557418 C1orf196B1AJZ1 125 aa14.07□□□□□ -0.16
FOXA1-205ENST00000557418 RAB5BP61020 215 aa14.07□□□□□ -0.16
FOXA1-205ENST00000557418 KRTAP4-5Q9BYR2 181 aa14.07□□□□□ -0.16
FOXA1-205ENST00000557418 PCLOQ9Y6V0 5065 aa14.07□□□□□ -0.16
FOXA1-205ENST00000557418 RNASEKQ6P5S7 137 aaKnown RBP14.06□□□□□ -0.16
FOXA1-205ENST00000557418 BAGE3Q86Y29 109 aa14.06□□□□□ -0.16
FOXA1-205ENST00000557418 TMEM18Q96B42 140 aa14.06□□□□□ -0.16
FOXA1-205ENST00000557418 CHCHD1Q96BP2 118 aaKnown RBP14.06□□□□□ -0.16
FOXA1-205ENST00000557418 TIMM21Q9BVV7 248 aa14.06□□□□□ -0.16
FOXA1-205ENST00000557418 A0A096LNJ9 63 aa14.05□□□□□ -0.16
FOXA1-205ENST00000557418 ZNF25P17030 456 aaPredicted RBP14.05□□□□□ -0.16
FOXA1-205ENST00000557418 C2orf66Q6UXQ4 117 aa14.05□□□□□ -0.16
FOXA1-205ENST00000557418 FAM104AQ969W3 186 aa14.05□□□□□ -0.16
FOXA1-205ENST00000557418 TM2D2Q9BX73 214 aa14.05□□□□□ -0.16
FOXA1-205ENST00000557418 LRCOL1A6NCL2 159 aa14.04□□□□□ -0.16
FOXA1-205ENST00000557418 SERF1AO75920 110 aa14.04□□□□□ -0.16
FOXA1-205ENST00000557418 AMMECR1LQ6DCA0 310 aa14.04□□□□□ -0.16
FOXA1-205ENST00000557418 CYSLTR1Q9Y271 337 aa14.04□□□□□ -0.16
FOXA1-205ENST00000557418 CSDC2Q9Y534 153 aaKnown RBP14.04□□□□□ -0.16
FOXA1-205ENST00000557418 TRAV8-3A0A0A6YYJ7 113 aa14.03□□□□□ -0.16
FOXA1-205ENST00000557418 Q8N1X5 172 aa14.03□□□□□ -0.16
FOXA1-205ENST00000557418 TOMM6Q96B49 74 aa14.03□□□□□ -0.16
FOXA1-205ENST00000557418 KLK12Q9UKR0 248 aa14.03□□□□□ -0.16
FOXA1-205ENST00000557418 NUPR1O60356 82 aa14.02□□□□□ -0.17
FOXA1-205ENST00000557418 PMCHL1Q16048 86 aa14.02□□□□□ -0.17
FOXA1-205ENST00000557418 SPANXA1Q9NS26 97 aa14.02□□□□□ -0.17
FOXA1-205ENST00000557418 PYGO1Q9Y3Y4 419 aa14.02□□□□□ -0.17
FOXA1-205ENST00000557418 ANGP03950 147 aaKnown RBP14.01□□□□□ -0.17
FOXA1-205ENST00000557418 GCSHP23434 173 aa14.01□□□□□ -0.17
FOXA1-205ENST00000557418 G0S2P27469 103 aa14.01□□□□□ -0.17
FOXA1-205ENST00000557418 CDC42SE2Q9NRR3 84 aa14.01□□□□□ -0.17
FOXA1-205ENST00000557418 PRR34Q9NV39 138 aa14.01□□□□□ -0.17
FOXA1-205ENST00000557418 IGIPA6NJ69 53 aa14□□□□□ -0.17
FOXA1-205ENST00000557418 KRTAP10-1P60331 282 aa14□□□□□ -0.17
FOXA1-205ENST00000557418 SMAGPQ0VAQ4 97 aa14□□□□□ -0.17
FOXA1-205ENST00000557418 COA6Q5JTJ3 125 aaKnown RBP14□□□□□ -0.17
FOXA1-205ENST00000557418 ENHOQ6UWT2 76 aa14□□□□□ -0.17
FOXA1-205ENST00000557418 LINC00269Q8N2A0 174 aa14□□□□□ -0.17
FOXA1-205ENST00000557418 OR5A1Q8NGJ0 315 aa14□□□□□ -0.17
FOXA1-205ENST00000557418 TMEM101Q96IK0 257 aa14□□□□□ -0.17
FOXA1-205ENST00000557418 IGLV5-52A0A0A0MRZ9 124 aa13.99□□□□□ -0.17
FOXA1-205ENST00000557418 HBDP02042 147 aa13.99□□□□□ -0.17
FOXA1-205ENST00000557418 MRPS36P82909 103 aaKnown RBP13.99□□□□□ -0.17
FOXA1-205ENST00000557418 Q6ZUT4 128 aa13.99□□□□□ -0.17
FOXA1-205ENST00000557418 NTN5Q8WTR8 489 aaPredicted RBP13.99□□□□□ -0.17
FOXA1-205ENST00000557418 OPRPNQ99935 248 aaPredicted RBP13.99□□□□□ -0.17
FOXA1-205ENST00000557418 HSBP1O75506 76 aa13.98□□□□□ -0.17
FOXA1-205ENST00000557418 PDZD11Q5EBL8 140 aa13.98□□□□□ -0.17
FOXA1-205ENST00000557418 ZNF664Q8N3J9 261 aa13.98□□□□□ -0.17
FOXA1-205ENST00000557418 Q8N814 137 aa13.98□□□□□ -0.17
FOXA1-205ENST00000557418 IGLV4-3A0A075B6K6 122 aa13.97□□□□□ -0.17
FOXA1-205ENST00000557418 LINC01549A6NIU2 74 aa13.97□□□□□ -0.17
FOXA1-205ENST00000557418 DGAT2L7PQ6IED9 249 aa13.97□□□□□ -0.17
FOXA1-205ENST00000557418 COX11Q9Y6N1 276 aa13.97□□□□□ -0.17
FOXA1-205ENST00000557418 XGP55808 180 aa13.96□□□□□ -0.17
FOXA1-205ENST00000557418 CLPSL2Q6UWE3 100 aa13.96□□□□□ -0.17
FOXA1-205ENST00000557418 ERASQ7Z444 233 aa13.96□□□□□ -0.17
FOXA1-205ENST00000557418 FAM19A2Q8N3H0 131 aa13.96□□□□□ -0.17
FOXA1-205ENST00000557418 UBE2WQ96B02 151 aa13.96□□□□□ -0.17
FOXA1-205ENST00000557418 RMI2Q96E14 147 aa13.96□□□□□ -0.17
FOXA1-205ENST00000557418 TIMM17AQ99595 171 aa13.96□□□□□ -0.17
FOXA1-205ENST00000557418 NPSP0C0P6 89 aa13.95□□□□□ -0.18
FOXA1-205ENST00000557418 NDUFA6P56556 154 aa13.95□□□□□ -0.18
FOXA1-205ENST00000557418 REG3AQ06141 175 aa13.95□□□□□ -0.18
FOXA1-205ENST00000557418 RNASE13Q5GAN3 156 aaKnown RBP13.95□□□□□ -0.18
FOXA1-205ENST00000557418 SCGB3A1Q96QR1 104 aa13.95□□□□□ -0.18
FOXA1-205ENST00000557418 ABCA13Q86UQ4 5058 aa13.95□□□□□ -0.18
FOXA1-205ENST00000557418 TMEM141Q96I45 108 aa13.93□□□□□ -0.18
FOXA1-205ENST00000557418 CRPP02741 224 aa13.92□□□□□ -0.18
FOXA1-205ENST00000557418 MIAQ16674 131 aa13.92□□□□□ -0.18
FOXA1-205ENST00000557418 LINC00173Q6ZV60 143 aa13.92□□□□□ -0.18
FOXA1-205ENST00000557418 AMELXQ99217 191 aa13.92□□□□□ -0.18
FOXA1-205ENST00000557418 IGKV2D-24A0A075B6R9 120 aa13.91□□□□□ -0.18
FOXA1-205ENST00000557418 EPM2AB3EWF7 344 aa13.91□□□□□ -0.18
FOXA1-205ENST00000557418 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
FOXA1-205ENST00000557418 LECT2O14960 151 aa13.9□□□□□ -0.18
FOXA1-205ENST00000557418 WFDC2Q14508 124 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms