RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 ZNF418Q8TF45 676 aaPredicted RBP16.22■□□□□ 0.19
RCCD1-208ENST00000557266 NDUFA12Q9UI09 145 aa16.22■□□□□ 0.19
RCCD1-208ENST00000557266 OTOGQ6ZRI0 2925 aa16.22■□□□□ 0.19
RCCD1-208ENST00000557266 C1QTNF4Q9BXJ3 329 aa16.22■□□□□ 0.19
RCCD1-208ENST00000557266 NIPBLQ6KC79 2804 aaeCLIP16.21■□□□□ 0.19
RCCD1-208ENST00000557266 Q6ZTI0 123 aa16.21■□□□□ 0.18
RCCD1-208ENST00000557266 SETD2Q9BYW2 2564 aaPredicted RBP16.2■□□□□ 0.18
RCCD1-208ENST00000557266 ADAMTSL4-AS1Q5T5F5 129 aa16.2■□□□□ 0.18
RCCD1-208ENST00000557266 ATP6V0E2Q8NHE4 81 aa16.2■□□□□ 0.18
RCCD1-208ENST00000557266 LINC01006Q8NI28 216 aa16.2■□□□□ 0.18
RCCD1-208ENST00000557266 GEMIN7Q9H840 131 aaKnown RBP16.2■□□□□ 0.18
RCCD1-208ENST00000557266 SCGB1C2P0DMR2 95 aa16.19■□□□□ 0.18
RCCD1-208ENST00000557266 YAE1D1Q9NRH1 226 aa16.19■□□□□ 0.18
RCCD1-208ENST00000557266 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.19■□□□□ 0.18
RCCD1-208ENST00000557266 GAGE12HA6NDE8 117 aa16.19■□□□□ 0.18
RCCD1-208ENST00000557266 CDKN2A-AS1Q9UH64 79 aa16.19■□□□□ 0.18
RCCD1-208ENST00000557266 ERG28Q9UKR5 140 aa16.19■□□□□ 0.18
RCCD1-208ENST00000557266 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.18■□□□□ 0.18
RCCD1-208ENST00000557266 SETXQ7Z333 2677 aaKnown RBP16.18■□□□□ 0.18
RCCD1-208ENST00000557266 GIG44P09565 113 aaPredicted RBP16.18■□□□□ 0.18
RCCD1-208ENST00000557266 FOXI1Q12951 378 aa16.18■□□□□ 0.18
RCCD1-208ENST00000557266 ANK3Q12955 4377 aaKnown RBP16.17■□□□□ 0.18
RCCD1-208ENST00000557266 IGLV5-45A0A087WSX0 123 aa16.17■□□□□ 0.18
RCCD1-208ENST00000557266 H7C2G1 150 aa16.17■□□□□ 0.18
RCCD1-208ENST00000557266 ZFAND6Q6FIF0 208 aa16.17■□□□□ 0.18
RCCD1-208ENST00000557266 SPATA25Q9BR10 227 aa16.17■□□□□ 0.18
RCCD1-208ENST00000557266 SPANXDQ9BXN6 97 aa16.17■□□□□ 0.18
RCCD1-208ENST00000557266 SPANXCQ9NY87 97 aa16.17■□□□□ 0.18
RCCD1-208ENST00000557266 K7EQD1 137 aa16.16■□□□□ 0.18
RCCD1-208ENST00000557266 LINC00694P0DN24 101 aa16.16■□□□□ 0.18
RCCD1-208ENST00000557266 TIRAPP58753 221 aa16.16■□□□□ 0.18
RCCD1-208ENST00000557266 SBSPONQ8IVN8 264 aa16.16■□□□□ 0.18
RCCD1-208ENST00000557266 DGAT2L7PQ6IED9 249 aa16.16■□□□□ 0.18
RCCD1-208ENST00000557266 RNASE1P07998 156 aaKnown RBP16.15■□□□□ 0.18
RCCD1-208ENST00000557266 WFDC10AQ9H1F0 79 aa16.15■□□□□ 0.18
RCCD1-208ENST00000557266 GTSF1LQ9H1H1 148 aa16.15■□□□□ 0.18
RCCD1-208ENST00000557266 C16orf95Q9H693 158 aa16.15■□□□□ 0.18
RCCD1-208ENST00000557266 TRAV4A0A0B4J268 109 aa16.15■□□□□ 0.18
RCCD1-208ENST00000557266 TRBV10-1A0A0K0K1A3 114 aa16.15■□□□□ 0.18
RCCD1-208ENST00000557266 PRSS2P07478 247 aa16.15■□□□□ 0.18
RCCD1-208ENST00000557266 RPL36AP83881 106 aaKnown RBP16.15■□□□□ 0.18
RCCD1-208ENST00000557266 MIAQ16674 131 aa16.15■□□□□ 0.18
RCCD1-208ENST00000557266 NTM-AS1Q6ZSK4 140 aa16.15■□□□□ 0.18
RCCD1-208ENST00000557266 RPL36ALQ969Q0 106 aaKnown RBP16.15■□□□□ 0.18
RCCD1-208ENST00000557266 JMJD1CQ15652 2540 aa16.14■□□□□ 0.17
RCCD1-208ENST00000557266 COX6A2Q02221 97 aa16.14■□□□□ 0.17
RCCD1-208ENST00000557266 SIGMAR1Q99720 223 aa16.13■□□□□ 0.17
RCCD1-208ENST00000557266 NOP10Q9NPE3 64 aaKnown RBP16.13■□□□□ 0.17
RCCD1-208ENST00000557266 TMEM101Q96IK0 257 aa16.13■□□□□ 0.17
RCCD1-208ENST00000557266 TEN1Q86WV5 123 aa16.12■□□□□ 0.17
RCCD1-208ENST00000557266 DAZ2Q13117 558 aaKnown RBP16.12■□□□□ 0.17
RCCD1-208ENST00000557266 LINC00242Q5T6M2 205 aa16.12■□□□□ 0.17
RCCD1-208ENST00000557266 DAZ4Q86SG3 579 aaKnown RBP16.12■□□□□ 0.17
RCCD1-208ENST00000557266 DAZ3Q9NR90 486 aaKnown RBP16.12■□□□□ 0.17
RCCD1-208ENST00000557266 MTORP42345 2549 aa16.11■□□□□ 0.17
RCCD1-208ENST00000557266 PLAC8L1A1L4L8 177 aa16.11■□□□□ 0.17
RCCD1-208ENST00000557266 Q1RN00 199 aa16.11■□□□□ 0.17
RCCD1-208ENST00000557266 SMR3AQ99954 134 aa16.11■□□□□ 0.17
RCCD1-208ENST00000557266 C19orf73Q9NVV2 129 aa16.11■□□□□ 0.17
RCCD1-208ENST00000557266 NDUFA7O95182 113 aa16.1■□□□□ 0.17
RCCD1-208ENST00000557266 CARD19Q96LW7 228 aa16.1■□□□□ 0.17
RCCD1-208ENST00000557266 GAGE12JA6NER3 117 aa16.1■□□□□ 0.17
RCCD1-208ENST00000557266 IGLV1-51P01701 117 aa16.1■□□□□ 0.17
RCCD1-208ENST00000557266 NPC2P61916 151 aa16.1■□□□□ 0.17
RCCD1-208ENST00000557266 GAGE4Q13068 117 aa16.1■□□□□ 0.17
RCCD1-208ENST00000557266 GAGE5Q13069 117 aa16.1■□□□□ 0.17
RCCD1-208ENST00000557266 NDUFA1O15239 70 aa16.09■□□□□ 0.17
RCCD1-208ENST00000557266 CMC4P56277 68 aaPredicted RBP16.09■□□□□ 0.17
RCCD1-208ENST00000557266 HERVK_113P63121 156 aa16.09■□□□□ 0.17
RCCD1-208ENST00000557266 CSDC2Q9Y534 153 aaKnown RBP16.09■□□□□ 0.17
RCCD1-208ENST00000557266 IGLV5-39A0A0G2JS06 123 aa16.09■□□□□ 0.17
RCCD1-208ENST00000557266 TIMM17BO60830 172 aa16.09■□□□□ 0.17
RCCD1-208ENST00000557266 RPL35AP18077 110 aaKnown RBP16.09■□□□□ 0.17
RCCD1-208ENST00000557266 PPDPFLQ8WWR9 84 aa16.09■□□□□ 0.17
RCCD1-208ENST00000557266 FAM19A3Q7Z5A8 133 aa16.08■□□□□ 0.16
RCCD1-208ENST00000557266 TRIAP1O43715 76 aa16.07■□□□□ 0.16
RCCD1-208ENST00000557266 C16orf74Q96GX8 76 aa16.07■□□□□ 0.16
RCCD1-208ENST00000557266 NOTCH3Q9UM47 2321 aa16.07■□□□□ 0.16
RCCD1-208ENST00000557266 LY6G6DO95868 133 aa16.07■□□□□ 0.16
RCCD1-208ENST00000557266 SMAGPQ0VAQ4 97 aa16.07■□□□□ 0.16
RCCD1-208ENST00000557266 ANKRD29Q8N6D5 301 aa16.07■□□□□ 0.16
RCCD1-208ENST00000557266 FAM110AQ9BQ89 295 aa16.07■□□□□ 0.16
RCCD1-208ENST00000557266 HIVEP2P31629 2446 aa16.07■□□□□ 0.16
RCCD1-208ENST00000557266 FLNBO75369 2602 aaKnown RBP16.06■□□□□ 0.16
RCCD1-208ENST00000557266 TRBV30A0A0K0K1B3 111 aa16.06■□□□□ 0.16
RCCD1-208ENST00000557266 SLC25A20O43772 301 aa16.06■□□□□ 0.16
RCCD1-208ENST00000557266 C9JAW5 83 aa16.06■□□□□ 0.16
RCCD1-208ENST00000557266 DAND5Q8N907 189 aa16.06■□□□□ 0.16
RCCD1-208ENST00000557266 TRAV13-1A0A0B4J241 112 aa16.05■□□□□ 0.16
RCCD1-208ENST00000557266 GAGE7O76087 117 aa16.05■□□□□ 0.16
RCCD1-208ENST00000557266 GAGE12FP0CL80 117 aa16.05■□□□□ 0.16
RCCD1-208ENST00000557266 GAGE12GP0CL81 117 aa16.05■□□□□ 0.16
RCCD1-208ENST00000557266 GAGE12IP0CL82 117 aa16.05■□□□□ 0.16
RCCD1-208ENST00000557266 CSNK1G2-AS1Q8NCQ2 148 aa16.05■□□□□ 0.16
RCCD1-208ENST00000557266 RNF183Q96D59 192 aa16.05■□□□□ 0.16
RCCD1-208ENST00000557266 CDC42SE2Q9NRR3 84 aa16.05■□□□□ 0.16
RCCD1-208ENST00000557266 SMIM1B2RUZ4 78 aa16.04■□□□□ 0.16
RCCD1-208ENST00000557266 CDIP1Q9H305 208 aa16.04■□□□□ 0.16
RCCD1-208ENST00000557266 TRGV2A0A075B6R0 118 aa16.03■□□□□ 0.16
RCCD1-208ENST00000557266 M0QXV9 152 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms