RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 MAPK1IP1LQ8NDC0 245 aa9.2□□□□□ -0.94
APEX1-216ENST00000557159 DUX3Q96PT4 197 aa9.2□□□□□ -0.94
APEX1-216ENST00000557159 ZNF580Q9UK33 172 aa9.2□□□□□ -0.94
APEX1-216ENST00000557159 IGLV5-45A0A087WSX0 123 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 A6NDX4 124 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 J3QLI3 93 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 UQCRQO14949 82 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 BRD3OSQ6XYD6 125 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 TMEM219Q86XT9 240 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 CLEC2BQ92478 149 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 CHCHD5Q9BSY4 110 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 CSPG4Q6UVK1 2322 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 ACANP16112 2415 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 CR1P17927 2039 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 NDUFA1O15239 70 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 C3orf22Q8N5N4 141 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 DNAJC30Q96LL9 226 aa9.19□□□□□ -0.94
APEX1-216ENST00000557159 COX7A2LO14548 114 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 TRACP01848 142 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 IGHV4-38-2P0DP08 117 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 TIRAPP58753 221 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 FAM222AQ5U5X8 452 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 LINC01356Q8N9X3 169 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 LINC00526Q96FQ7 95 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 VPREB3Q9UKI3 123 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.18□□□□□ -0.941e-7■■□□□ 14.1
APEX1-216ENST00000557159 ABCA2Q9BZC7 2435 aa9.18□□□□□ -0.94
APEX1-216ENST00000557159 IGHV3OR16-10A0A075B7F0 116 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 H3BUX3 64 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 DAND5Q8N907 189 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 PEMTQ9UBM1 199 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 HIVEP1P15822 2718 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 FAM236AA0A1B0GUQ0 79 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 FAM236BA0A1B0GV22 79 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 A0A1B0GX51 115 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 IGLV1-40P01703 118 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 CIRBPQ14011 172 aaKnown RBP9.17□□□□□ -0.94
APEX1-216ENST00000557159 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 DEFB104AQ8WTQ1 72 aa9.17□□□□□ -0.94
APEX1-216ENST00000557159 CITED2Q99967 270 aaPredicted RBP9.16□□□□□ -0.94
APEX1-216ENST00000557159 ADARB2-AS1A8MUL3 147 aa9.15□□□□□ -0.94
APEX1-216ENST00000557159 NDUFA7O95182 113 aa9.15□□□□□ -0.94
APEX1-216ENST00000557159 IGHV4-31P0DP07 118 aa9.15□□□□□ -0.94
APEX1-216ENST00000557159 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
APEX1-216ENST00000557159 F8P00451 2351 aa9.15□□□□□ -0.94
APEX1-216ENST00000557159 NF1P21359 2839 aa9.15□□□□□ -0.94
APEX1-216ENST00000557159 PF4V1P10720 104 aa9.15□□□□□ -0.95
APEX1-216ENST00000557159 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.95
APEX1-216ENST00000557159 BEAN1Q3B7T3 259 aa9.15□□□□□ -0.95
APEX1-216ENST00000557159 FAM19A3Q7Z5A8 133 aa9.15□□□□□ -0.95
APEX1-216ENST00000557159 TLN2Q9Y4G6 2542 aa9.14□□□□□ -0.95
APEX1-216ENST00000557159 TMEM89A2RUT3 159 aa9.14□□□□□ -0.95
APEX1-216ENST00000557159 CHCHD7Q9BUK0 85 aa9.14□□□□□ -0.95
APEX1-216ENST00000557159 IGLV5-39A0A0G2JS06 123 aa9.13□□□□□ -0.95
APEX1-216ENST00000557159 INAFM2P0DMQ5 153 aa9.13□□□□□ -0.95
APEX1-216ENST00000557159 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
APEX1-216ENST00000557159 RPS28P62857 69 aaKnown RBP9.13□□□□□ -0.95
APEX1-216ENST00000557159 CFHR3Q02985 330 aa9.13□□□□□ -0.95
APEX1-216ENST00000557159 KRTAP1-1Q07627 177 aa9.13□□□□□ -0.95
APEX1-216ENST00000557159 LY6EQ16553 131 aa9.13□□□□□ -0.95
APEX1-216ENST00000557159 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
APEX1-216ENST00000557159 LINC00527Q9UJ94 153 aa9.13□□□□□ -0.95
APEX1-216ENST00000557159 K7EQG2 157 aa9.12□□□□□ -0.95
APEX1-216ENST00000557159 ZNF415Q09FC8 603 aa9.12□□□□□ -0.95
APEX1-216ENST00000557159 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
APEX1-216ENST00000557159 IGKV3-7A0A075B6H7 116 aa9.12□□□□□ -0.95
APEX1-216ENST00000557159 IGHV3-11P01762 117 aa9.12□□□□□ -0.95
APEX1-216ENST00000557159 Q6ZSV7 163 aa9.12□□□□□ -0.95
APEX1-216ENST00000557159 SMCR5Q8TEV8 140 aa9.12□□□□□ -0.95
APEX1-216ENST00000557159 PF4P02776 101 aa9.11□□□□□ -0.95
APEX1-216ENST00000557159 CRYGAP11844 174 aa9.11□□□□□ -0.95
APEX1-216ENST00000557159 COX7CP15954 63 aa9.11□□□□□ -0.95
APEX1-216ENST00000557159 BLCAPP62952 87 aa9.11□□□□□ -0.95
APEX1-216ENST00000557159 A8MTW9 85 aa9.1□□□□□ -0.95
APEX1-216ENST00000557159 AVPP01185 164 aa9.1□□□□□ -0.95
APEX1-216ENST00000557159 SMR3AQ99954 134 aa9.1□□□□□ -0.95
APEX1-216ENST00000557159 HERVK_113P63121 156 aa9.1□□□□□ -0.95
APEX1-216ENST00000557159 DAZ2Q13117 558 aaKnown RBP9.1□□□□□ -0.95
APEX1-216ENST00000557159 DAZ4Q86SG3 579 aaKnown RBP9.1□□□□□ -0.95
APEX1-216ENST00000557159 OVOL2Q9BRP0 275 aa9.1□□□□□ -0.95
APEX1-216ENST00000557159 DAZ3Q9NR90 486 aaKnown RBP9.1□□□□□ -0.95
APEX1-216ENST00000557159 TRAV12-2A0A075B6T6 113 aa9.09□□□□□ -0.95
APEX1-216ENST00000557159 ATOX1O00244 68 aa9.09□□□□□ -0.95
APEX1-216ENST00000557159 CEMP1Q6PRD7 247 aaPredicted RBP9.09□□□□□ -0.95
APEX1-216ENST00000557159 ZFHX3Q15911 3703 aa9.09□□□□□ -0.95
APEX1-216ENST00000557159 J3KT08 172 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 CDKN2A-AS1Q9UH64 79 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 C22orf24Q9Y442 160 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 SONP18583 2426 aaKnown RBP9.08□□□□□ -0.96
APEX1-216ENST00000557159 MXRA5Q9NR99 2828 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 LY6G6DO95868 133 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 BAALC-AS2P0C853 105 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 LINC00694P0DN24 101 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 DEFB112Q30KQ8 113 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 C2orf48Q96LS8 159 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 DUX5Q96PT3 197 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 LINC00467Q9BRT7 94 aa9.08□□□□□ -0.96
APEX1-216ENST00000557159 HIVEP2P31629 2446 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms