RNA–Protein interactions for RNA: ENST00000556245.1

PRKCH-221, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-221ENST00000556245 ZFAND6Q6FIF0 208 aa8.37□□□□□ -1.07
PRKCH-221ENST00000556245 ZNF418Q8TF45 676 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-221ENST00000556245 IGLV5-45A0A087WSX0 123 aa8.36□□□□□ -1.07
PRKCH-221ENST00000556245 C16orf74Q96GX8 76 aa8.36□□□□□ -1.07
PRKCH-221ENST00000556245 LITAFQ99732 161 aa8.36□□□□□ -1.07
PRKCH-221ENST00000556245 C1QTNF4Q9BXJ3 329 aa8.36□□□□□ -1.07
PRKCH-221ENST00000556245 IGLV1-51P01701 117 aa8.36□□□□□ -1.07
PRKCH-221ENST00000556245 PRSS2P07478 247 aa8.36□□□□□ -1.07
PRKCH-221ENST00000556245 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-221ENST00000556245 HERVK_113P63121 156 aa8.35□□□□□ -1.07
PRKCH-221ENST00000556245 CHD6Q8TD26 2715 aa8.35□□□□□ -1.07
PRKCH-221ENST00000556245 NOP10Q9NPE3 64 aaKnown RBP8.35□□□□□ -1.07
PRKCH-221ENST00000556245 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
PRKCH-221ENST00000556245 CSDC2Q9Y534 153 aaKnown RBP8.35□□□□□ -1.07
PRKCH-221ENST00000556245 MIAQ16674 131 aa8.35□□□□□ -1.07
PRKCH-221ENST00000556245 Q1RN00 199 aa8.35□□□□□ -1.07
PRKCH-221ENST00000556245 FLNAP21333 2647 aaKnown RBP8.35□□□□□ -1.07
PRKCH-221ENST00000556245 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-221ENST00000556245 TIMM17BO60830 172 aa8.34□□□□□ -1.07
PRKCH-221ENST00000556245 H7C2G1 150 aa8.34□□□□□ -1.07
PRKCH-221ENST00000556245 CIDEAO60543 219 aa8.34□□□□□ -1.07
PRKCH-221ENST00000556245 GAGE12HA6NDE8 117 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 GAGE12JA6NER3 117 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-221ENST00000556245 RPL35AP18077 110 aaKnown RBP8.33□□□□□ -1.08
PRKCH-221ENST00000556245 HILS1P60008 231 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 FOXI1Q12951 378 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 GAGE4Q13068 117 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 GAGE5Q13069 117 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 CCDC168Q8NDH2 2452 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 TRGV2A0A075B6R0 118 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 A8MZ25 164 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 NDUFA1O15239 70 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 ADAMTSL4-AS1Q5T5F5 129 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 TMEM101Q96IK0 257 aa8.33□□□□□ -1.08
PRKCH-221ENST00000556245 J3QKU1 62 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 NDUFA7O95182 113 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 IFITM1P13164 125 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 SBSPONQ8IVN8 264 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 RNF183Q96D59 192 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 SIGMAR1Q99720 223 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 SPATA25Q9BR10 227 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 C19orf73Q9NVV2 129 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 CIRBPQ14011 172 aaKnown RBP8.32□□□□□ -1.08
PRKCH-221ENST00000556245 LINC00242Q5T6M2 205 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 NTM-AS1Q6ZSK4 140 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 TEN1Q86WV5 123 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 WFDC10AQ9H1F0 79 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 GTSF1LQ9H1H1 148 aa8.32□□□□□ -1.08
PRKCH-221ENST00000556245 ZNF469Q96JG9 3925 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-221ENST00000556245 GAGE7O76087 117 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 GAGE12FP0CL80 117 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 GAGE12GP0CL81 117 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 GAGE12IP0CL82 117 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 INSL3P51460 131 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 COX6A2Q02221 97 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 TRBV30A0A0K0K1B3 111 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 PLAC8L1A1L4L8 177 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 UBE2L6O14933 153 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 PLA2G2AP14555 144 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 PPDPFLQ8WWR9 84 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 OVOL2Q9BRP0 275 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 IGLV5-39A0A0G2JS06 123 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 TRBV6-4A0A1B0GX49 114 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-221ENST00000556245 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
PRKCH-221ENST00000556245 ATXN8Q156A1 80 aa8.3□□□□□ -1.08
PRKCH-221ENST00000556245 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
PRKCH-221ENST00000556245 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
PRKCH-221ENST00000556245 CSNK1G2-AS1Q8NCQ2 148 aa8.3□□□□□ -1.08
PRKCH-221ENST00000556245 AKAP9Q99996 3911 aa8.29□□□□□ -1.08
PRKCH-221ENST00000556245 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
PRKCH-221ENST00000556245 H7C423 109 aa8.29□□□□□ -1.08
PRKCH-221ENST00000556245 M0QXV9 152 aa8.29□□□□□ -1.08
PRKCH-221ENST00000556245 SLC25A20O43772 301 aa8.29□□□□□ -1.08
PRKCH-221ENST00000556245 C9JAW5 83 aa8.29□□□□□ -1.08
PRKCH-221ENST00000556245 Q9H8V8 135 aa8.29□□□□□ -1.08
PRKCH-221ENST00000556245 SMIM1B2RUZ4 78 aa8.28□□□□□ -1.08
PRKCH-221ENST00000556245 COX6CP09669 75 aa8.28□□□□□ -1.08
PRKCH-221ENST00000556245 NPC2P61916 151 aa8.28□□□□□ -1.08
PRKCH-221ENST00000556245 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
PRKCH-221ENST00000556245 TRIAP1O43715 76 aa8.28□□□□□ -1.08
PRKCH-221ENST00000556245 SCGB1A1P11684 91 aa8.28□□□□□ -1.08
PRKCH-221ENST00000556245 ICOSQ9Y6W8 199 aa8.28□□□□□ -1.08
PRKCH-221ENST00000556245 NF1P21359 2839 aa8.27□□□□□ -1.08
PRKCH-221ENST00000556245 ANKRD29Q8N6D5 301 aa8.27□□□□□ -1.09
PRKCH-221ENST00000556245 PDZD2O15018 2839 aa8.26□□□□□ -1.09
PRKCH-221ENST00000556245 PF4P02776 101 aa8.26□□□□□ -1.09
PRKCH-221ENST00000556245 LINC01620Q4KN68 170 aa8.26□□□□□ -1.09
PRKCH-221ENST00000556245 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
PRKCH-221ENST00000556245 LOC100131303A0A0U1RQF7 123 aa8.25□□□□□ -1.09
PRKCH-221ENST00000556245 HERV-K104P63124 156 aa8.25□□□□□ -1.09
PRKCH-221ENST00000556245 DAND5Q8N907 189 aa8.25□□□□□ -1.09
PRKCH-221ENST00000556245 TENM4Q6N022 2769 aa8.25□□□□□ -1.09
PRKCH-221ENST00000556245 ACANP16112 2415 aa8.25□□□□□ -1.09
PRKCH-221ENST00000556245 F5H768 121 aa8.25□□□□□ -1.09
PRKCH-221ENST00000556245 PRIMA1Q86XR5 153 aa8.25□□□□□ -1.09
PRKCH-221ENST00000556245 LINC00308Q8TCZ7 52 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms