RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CSDC2Q9Y534 153 aaKnown RBP10.36□□□□□ -0.75
VPS33B-205ENST00000556096 HINT1P49773 126 aaPredicted RBP10.35□□□□□ -0.75
VPS33B-205ENST00000556096 HERVK_113P61574 105 aa10.35□□□□□ -0.75
VPS33B-205ENST00000556096 BATFQ16520 125 aa10.35□□□□□ -0.75
VPS33B-205ENST00000556096 HIGD1BQ9P298 99 aa10.35□□□□□ -0.75
VPS33B-205ENST00000556096 PRO0255Q9UI72 69 aa10.35□□□□□ -0.75
VPS33B-205ENST00000556096 H7C423 109 aa10.34□□□□□ -0.75
VPS33B-205ENST00000556096 MPV17L2Q567V2 206 aa10.34□□□□□ -0.75
VPS33B-205ENST00000556096 COL5A1-AS1Q5SY13 56 aa10.34□□□□□ -0.75
VPS33B-205ENST00000556096 CHAC1Q9BUX1 264 aa10.34□□□□□ -0.75
VPS33B-205ENST00000556096 K7EIL1 84 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 DEFB4AO15263 64 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 SPART-AS1P0CW21 52 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 DAD1P61803 113 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 DGAT2L7PQ6IED9 249 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 TMEM243Q9BU79 118 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 TTTY13Q9BZ97 58 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 TRAV8-6A0A0B4J262 113 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 A0A0J9YXV3 536 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 Q6ZUT4 128 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
VPS33B-205ENST00000556096 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
VPS33B-205ENST00000556096 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
VPS33B-205ENST00000556096 DEFB121Q5J5C9 76 aa10.32□□□□□ -0.76
VPS33B-205ENST00000556096 BVES-AS1Q5T3Y7 98 aa10.32□□□□□ -0.76
VPS33B-205ENST00000556096 TEX48A0A1B0GUV7 120 aa10.31□□□□□ -0.76
VPS33B-205ENST00000556096 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
VPS33B-205ENST00000556096 GYPEP15421 78 aa10.31□□□□□ -0.76
VPS33B-205ENST00000556096 ZNF22P17026 224 aaPredicted RBP10.31□□□□□ -0.76
VPS33B-205ENST00000556096 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
VPS33B-205ENST00000556096 TRBV6-8A0A0A6YYG3 113 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 MYMXA0A1B0GTQ4 84 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 ATP5G1P05496 136 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 HSD52Q0P140 79 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 MRAPQ8TCY5 172 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 UBE2L6O14933 153 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 PAX4O43316 350 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 RNASE13Q5GAN3 156 aaKnown RBP10.3□□□□□ -0.76
VPS33B-205ENST00000556096 ATP6V0E2Q8NHE4 81 aa10.3□□□□□ -0.76
VPS33B-205ENST00000556096 A0A1B0GV90 55 aa10.29□□□□□ -0.76
VPS33B-205ENST00000556096 ZNF25P17030 456 aaPredicted RBP10.29□□□□□ -0.76
VPS33B-205ENST00000556096 UBE2D1P51668 147 aa10.29□□□□□ -0.76
VPS33B-205ENST00000556096 CDC42SE2Q9NRR3 84 aa10.29□□□□□ -0.76
VPS33B-205ENST00000556096 PRKDCP78527 4128 aaKnown RBP10.28□□□□□ -0.76
VPS33B-205ENST00000556096 TIRAPP58753 221 aa10.28□□□□□ -0.76
VPS33B-205ENST00000556096 AMMECR1LQ6DCA0 310 aa10.28□□□□□ -0.76
VPS33B-205ENST00000556096 FAM19A3Q7Z5A8 133 aa10.28□□□□□ -0.76
VPS33B-205ENST00000556096 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
VPS33B-205ENST00000556096 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
VPS33B-205ENST00000556096 LEPROTO15243 131 aa10.27□□□□□ -0.76
VPS33B-205ENST00000556096 VSIG2Q96IQ7 327 aa10.27□□□□□ -0.76
VPS33B-205ENST00000556096 ZNF815PA8K554 130 aa10.26□□□□□ -0.77
VPS33B-205ENST00000556096 SEC11AP67812 179 aa10.26□□□□□ -0.77
VPS33B-205ENST00000556096 TAL2Q16559 108 aa10.26□□□□□ -0.77
VPS33B-205ENST00000556096 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
VPS33B-205ENST00000556096 J3QQQ9 107 aa10.25□□□□□ -0.77
VPS33B-205ENST00000556096 ORAOV1Q8WV07 137 aa10.25□□□□□ -0.77
VPS33B-205ENST00000556096 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
VPS33B-205ENST00000556096 C11orf68Q9H3H3 251 aaKnown RBP10.25□□□□□ -0.77
VPS33B-205ENST00000556096 GEMIN7Q9H840 131 aaKnown RBP10.25□□□□□ -0.77
VPS33B-205ENST00000556096 RETNQ9HD89 108 aa10.25□□□□□ -0.77
VPS33B-205ENST00000556096 TRAV26-1A0A087WT03 109 aa10.24□□□□□ -0.77
VPS33B-205ENST00000556096 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
VPS33B-205ENST00000556096 F5H768 121 aa10.24□□□□□ -0.77
VPS33B-205ENST00000556096 LGALS3P17931 250 aaKnown RBP10.24□□□□□ -0.77
VPS33B-205ENST00000556096 TSPEAR-AS2P59090 65 aa10.24□□□□□ -0.77
VPS33B-205ENST00000556096 HERVK_113P63121 156 aa10.24□□□□□ -0.77
VPS33B-205ENST00000556096 GAGE6Q13070 117 aa10.24□□□□□ -0.77
VPS33B-205ENST00000556096 A0A0J9YY99 117 aa10.23□□□□□ -0.77
VPS33B-205ENST00000556096 C12orf74Q32Q52 190 aa10.23□□□□□ -0.77
VPS33B-205ENST00000556096 LINC00242Q5T6M2 205 aa10.23□□□□□ -0.77
VPS33B-205ENST00000556096 LINC00469Q8N7U9 141 aa10.23□□□□□ -0.77
VPS33B-205ENST00000556096 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
VPS33B-205ENST00000556096 H3BRM9 83 aa10.22□□□□□ -0.77
VPS33B-205ENST00000556096 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
VPS33B-205ENST00000556096 TM2D2Q9BX73 214 aa10.22□□□□□ -0.77
VPS33B-205ENST00000556096 DNAH9Q9NYC9 4486 aa10.22□□□□□ -0.77
VPS33B-205ENST00000556096 IGHV3-30-3P0DP02 117 aa10.21□□□□□ -0.77
VPS33B-205ENST00000556096 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.77
VPS33B-205ENST00000556096 A0A1B0GUV1 79 aa10.21□□□□□ -0.78
VPS33B-205ENST00000556096 A6NDN8 102 aa10.21□□□□□ -0.78
VPS33B-205ENST00000556096 COX6A2Q02221 97 aa10.21□□□□□ -0.78
VPS33B-205ENST00000556096 SCGB1D4Q6XE38 83 aa10.21□□□□□ -0.78
VPS33B-205ENST00000556096 CEND1Q8N111 149 aa10.21□□□□□ -0.78
VPS33B-205ENST00000556096 CDKN2A-AS1Q9UH64 79 aa10.21□□□□□ -0.78
VPS33B-205ENST00000556096 IGLV4-60A0A075B6I1 120 aa10.2□□□□□ -0.78
VPS33B-205ENST00000556096 TRAV13-1A0A0B4J241 112 aa10.2□□□□□ -0.78
VPS33B-205ENST00000556096 HTN3P15516 51 aa10.2□□□□□ -0.78
VPS33B-205ENST00000556096 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
VPS33B-205ENST00000556096 IGHV3-64A0A075B6Q5 118 aa10.19□□□□□ -0.78
VPS33B-205ENST00000556096 A0A096LPF7 62 aa10.19□□□□□ -0.78
VPS33B-205ENST00000556096 GCSHP23434 173 aa10.19□□□□□ -0.78
VPS33B-205ENST00000556096 ICOSQ9Y6W8 199 aa10.19□□□□□ -0.78
VPS33B-205ENST00000556096 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
VPS33B-205ENST00000556096 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
VPS33B-205ENST00000556096 H3BNG1 76 aa10.19□□□□□ -0.78
VPS33B-205ENST00000556096 TAX1BP3O14907 124 aa10.19□□□□□ -0.78
VPS33B-205ENST00000556096 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms