RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PRSS1P07477 247 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 AKR1D1P51857 326 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 LINC00310P59036 64 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 MRPS36P82909 103 aaKnown RBP7.69□□□□□ -1.18
SHMT2-220ENST00000555634 MPV17L2Q567V2 206 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 LINC01556Q5JQF7 62 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 HIST3H2BBQ8N257 126 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 VCX2Q9H322 139 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 C5orf52A6NGY3 159 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 IGHV3-30P01768 117 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 IGHV3-33P01772 117 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 DNAH10OSP0CZ25 163 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 IGHV3-30-3P0DP02 117 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 IGHV3-30-5P0DP03 117 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 RBX1P62877 108 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 LGALS9CQ6DKI2 356 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 ZNF664Q8N3J9 261 aa7.68□□□□□ -1.18
SHMT2-220ENST00000555634 H0Y8G0 127 aa7.67□□□□□ -1.18
SHMT2-220ENST00000555634 KRTDAPP60985 99 aa7.67□□□□□ -1.18
SHMT2-220ENST00000555634 SEC11AP67812 179 aa7.67□□□□□ -1.18
SHMT2-220ENST00000555634 PMVKQ15126 192 aa7.67□□□□□ -1.18
SHMT2-220ENST00000555634 Q6ZUT4 128 aa7.67□□□□□ -1.18
SHMT2-220ENST00000555634 RMI2Q96E14 147 aa7.67□□□□□ -1.18
SHMT2-220ENST00000555634 Q9H8V8 135 aa7.67□□□□□ -1.18
SHMT2-220ENST00000555634 IGLV4-3A0A075B6K6 122 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 A0A096LNJ9 63 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 IGIPA6NJ69 53 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 CCL25O15444 150 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 NUPR1O60356 82 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 LY6G6CO95867 125 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 SS18Q15532 418 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 Q8N976 141 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 HIST1H2BLQ99880 126 aa7.66□□□□□ -1.18
SHMT2-220ENST00000555634 IGKV3OR2-268A0A0C4DH90 116 aa7.65□□□□□ -1.18
SHMT2-220ENST00000555634 REG3AQ06141 175 aa7.65□□□□□ -1.18
SHMT2-220ENST00000555634 MIAQ16674 131 aa7.65□□□□□ -1.18
SHMT2-220ENST00000555634 BAALCQ8WXS3 180 aa7.65□□□□□ -1.18
SHMT2-220ENST00000555634 CDC42SE2Q9NRR3 84 aa7.65□□□□□ -1.18
SHMT2-220ENST00000555634 KLK12Q9UKR0 248 aa7.65□□□□□ -1.18
SHMT2-220ENST00000555634 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
SHMT2-220ENST00000555634 TRAV12-1A0A0B4J245 112 aa7.64□□□□□ -1.19
SHMT2-220ENST00000555634 PLNP26678 52 aa7.64□□□□□ -1.19
SHMT2-220ENST00000555634 CLPSL2Q6UWE3 100 aa7.64□□□□□ -1.19
SHMT2-220ENST00000555634 LINC00269Q8N2A0 174 aa7.64□□□□□ -1.19
SHMT2-220ENST00000555634 LINC00476Q8WZB0 136 aa7.64□□□□□ -1.19
SHMT2-220ENST00000555634 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
SHMT2-220ENST00000555634 TENM2Q9NT68 2774 aa7.63□□□□□ -1.19
SHMT2-220ENST00000555634 IGLV4-60A0A075B6I1 120 aa7.63□□□□□ -1.19
SHMT2-220ENST00000555634 TRAV8-4A0A0B4J246 113 aa7.63□□□□□ -1.19
SHMT2-220ENST00000555634 SYS1-DBNDD2H3BUS1 97 aa7.63□□□□□ -1.19
SHMT2-220ENST00000555634 RNASE13Q5GAN3 156 aaKnown RBP7.63□□□□□ -1.19
SHMT2-220ENST00000555634 PET117Q6UWS5 81 aa7.63□□□□□ -1.19
SHMT2-220ENST00000555634 UBE2WQ96B02 151 aa7.63□□□□□ -1.19
SHMT2-220ENST00000555634 C1orf43Q9BWL3 253 aa7.63□□□□□ -1.19
SHMT2-220ENST00000555634 CHTOPQ9Y3Y2 248 aaKnown RBP7.63□□□□□ -1.19
SHMT2-220ENST00000555634 COX11Q9Y6N1 276 aa7.63□□□□□ -1.19
SHMT2-220ENST00000555634 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
SHMT2-220ENST00000555634 TRAV13-1A0A0B4J241 112 aa7.62□□□□□ -1.19
SHMT2-220ENST00000555634 HERVK_113P63121 156 aa7.62□□□□□ -1.19
SHMT2-220ENST00000555634 NFE4Q86UQ8 179 aa7.62□□□□□ -1.19
SHMT2-220ENST00000555634 AMELXQ99217 191 aa7.62□□□□□ -1.19
SHMT2-220ENST00000555634 CST9LQ9H4G1 147 aa7.62□□□□□ -1.19
SHMT2-220ENST00000555634 F8VRH5 84 aa7.61□□□□□ -1.19
SHMT2-220ENST00000555634 H3BRM9 83 aa7.61□□□□□ -1.19
SHMT2-220ENST00000555634 C3orf79P0CE67 100 aa7.61□□□□□ -1.19
SHMT2-220ENST00000555634 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
SHMT2-220ENST00000555634 OPRPNQ99935 248 aaPredicted RBP7.61□□□□□ -1.19
SHMT2-220ENST00000555634 CHAC1Q9BUX1 264 aa7.61□□□□□ -1.19
SHMT2-220ENST00000555634 Q9HAA7 133 aa7.61□□□□□ -1.19
SHMT2-220ENST00000555634 NBDYA0A0U1RRE5 68 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 LINC00959A0A1B0GUT2 108 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 IBA57-AS1B1ANH7 110 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 PSCAO43653 123 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 DPM2O94777 84 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 SCGB1D1O95968 90 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 HERVK_113P61574 105 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 LINC00173Q6ZV60 143 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 SPATA12Q7Z6I5 190 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 TM2D2Q9BX73 214 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 PRR34Q9NV39 138 aa7.6□□□□□ -1.19
SHMT2-220ENST00000555634 IGKV2D-24A0A075B6R9 120 aa7.59□□□□□ -1.19
SHMT2-220ENST00000555634 PRSS29PA6NIE9 313 aa7.59□□□□□ -1.19
SHMT2-220ENST00000555634 HSBP1L1C9JCN9 74 aa7.59□□□□□ -1.19
SHMT2-220ENST00000555634 XCL1P47992 114 aa7.59□□□□□ -1.19
SHMT2-220ENST00000555634 UBE2D1P51668 147 aa7.59□□□□□ -1.19
SHMT2-220ENST00000555634 Q8N3U1 123 aa7.59□□□□□ -1.19
SHMT2-220ENST00000555634 EPPK1P58107 5090 aaKnown RBP7.59□□□□□ -1.19
SHMT2-220ENST00000555634 TINCRA0A1B0GVN0 87 aa7.58□□□□□ -1.2
SHMT2-220ENST00000555634 IGKCP01834 107 aa7.58□□□□□ -1.2
SHMT2-220ENST00000555634 ODF1Q14990 250 aa7.58□□□□□ -1.2
SHMT2-220ENST00000555634 LINC00469Q8N7U9 141 aa7.58□□□□□ -1.2
SHMT2-220ENST00000555634 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
SHMT2-220ENST00000555634 APOMO95445 188 aa7.57□□□□□ -1.2
SHMT2-220ENST00000555634 IGLC3P0DOY3 106 aa7.57□□□□□ -1.2
SHMT2-220ENST00000555634 MALP21145 153 aa7.57□□□□□ -1.2
SHMT2-220ENST00000555634 TMEM170BQ5T4T1 132 aa7.57□□□□□ -1.2
SHMT2-220ENST00000555634 LINC01545Q5VT33 79 aa7.57□□□□□ -1.2
SHMT2-220ENST00000555634 CD164L2Q6UWJ8 174 aa7.57□□□□□ -1.2
SHMT2-220ENST00000555634 CHCHD10Q8WYQ3 142 aaPredicted RBP7.57□□□□□ -1.2
SHMT2-220ENST00000555634 MRPL35Q9NZE8 188 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms