RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 OR5A1Q8NGJ0 315 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 PLEKHB2Q96CS7 222 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 A0A0J9YXV3 536 aa10.25□□□□□ -0.77
IFT43-209ENST00000555305 ZNF815PA8K554 130 aa10.25□□□□□ -0.77
IFT43-209ENST00000555305 LEPROTO15243 131 aa10.25□□□□□ -0.77
IFT43-209ENST00000555305 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
IFT43-209ENST00000555305 DAD1P61803 113 aa10.25□□□□□ -0.77
IFT43-209ENST00000555305 OXLD1Q5BKU9 147 aa10.25□□□□□ -0.77
IFT43-209ENST00000555305 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
IFT43-209ENST00000555305 ATRQ13535 2644 aa10.24□□□□□ -0.77
IFT43-209ENST00000555305 H3BRM9 83 aa10.24□□□□□ -0.77
IFT43-209ENST00000555305 LGALS3P17931 250 aaKnown RBP10.24□□□□□ -0.77
IFT43-209ENST00000555305 TIRAPP58753 221 aa10.24□□□□□ -0.77
IFT43-209ENST00000555305 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
IFT43-209ENST00000555305 Q6ZUT4 128 aa10.24□□□□□ -0.77
IFT43-209ENST00000555305 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
IFT43-209ENST00000555305 GEMIN7Q9H840 131 aaKnown RBP10.24□□□□□ -0.77
IFT43-209ENST00000555305 NIPBLQ6KC79 2804 aaeCLIP10.24□□□□□ -0.77
IFT43-209ENST00000555305 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
IFT43-209ENST00000555305 HERVK_113P63121 156 aa10.24□□□□□ -0.77
IFT43-209ENST00000555305 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
IFT43-209ENST00000555305 J3QQQ9 107 aa10.23□□□□□ -0.77
IFT43-209ENST00000555305 ATP5G1P05496 136 aa10.23□□□□□ -0.77
IFT43-209ENST00000555305 UBE2D1P51668 147 aa10.23□□□□□ -0.77
IFT43-209ENST00000555305 SCGB1D4Q6XE38 83 aa10.23□□□□□ -0.77
IFT43-209ENST00000555305 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
IFT43-209ENST00000555305 TTTY13Q9BZ97 58 aa10.23□□□□□ -0.77
IFT43-209ENST00000555305 GYPEP15421 78 aa10.22□□□□□ -0.77
IFT43-209ENST00000555305 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
IFT43-209ENST00000555305 ATP6V0E2Q8NHE4 81 aa10.22□□□□□ -0.77
IFT43-209ENST00000555305 TRAV26-1A0A087WT03 109 aa10.21□□□□□ -0.77
IFT43-209ENST00000555305 LOC100131303A0A0U1RQF7 123 aa10.21□□□□□ -0.77
IFT43-209ENST00000555305 PAX4O43316 350 aa10.21□□□□□ -0.77
IFT43-209ENST00000555305 KRTAP10-11P60412 298 aa10.21□□□□□ -0.77
IFT43-209ENST00000555305 CEND1Q8N111 149 aa10.21□□□□□ -0.77
IFT43-209ENST00000555305 CDC42SE2Q9NRR3 84 aa10.21□□□□□ -0.77
IFT43-209ENST00000555305 COX11Q9Y6N1 276 aa10.21□□□□□ -0.77
IFT43-209ENST00000555305 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.77
IFT43-209ENST00000555305 IGLV5-45A0A087WSX0 123 aa10.21□□□□□ -0.78
IFT43-209ENST00000555305 HIST1H4GQ99525 98 aa10.21□□□□□ -0.78
IFT43-209ENST00000555305 IGHV1-58A0A0C4DH39 117 aa10.2□□□□□ -0.78
IFT43-209ENST00000555305 GCSHP23434 173 aa10.2□□□□□ -0.78
IFT43-209ENST00000555305 PTTG1IPP53801 180 aa10.19□□□□□ -0.78
IFT43-209ENST00000555305 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
IFT43-209ENST00000555305 A6NJY4 79 aa10.19□□□□□ -0.78
IFT43-209ENST00000555305 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
IFT43-209ENST00000555305 SPANXB1Q9NS25 103 aaPredicted RBP10.19□□□□□ -0.78
IFT43-209ENST00000555305 NOTCH3Q9UM47 2321 aa10.18□□□□□ -0.78
IFT43-209ENST00000555305 CYSRT1A8MQ03 144 aa10.18□□□□□ -0.78
IFT43-209ENST00000555305 RNASE13Q5GAN3 156 aaKnown RBP10.18□□□□□ -0.78
IFT43-209ENST00000555305 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
IFT43-209ENST00000555305 SMIM13P0DJ93 91 aa10.17□□□□□ -0.78
IFT43-209ENST00000555305 IGHV3-30-3P0DP02 117 aa10.17□□□□□ -0.78
IFT43-209ENST00000555305 VSIG2Q96IQ7 327 aa10.17□□□□□ -0.78
IFT43-209ENST00000555305 C11orf68Q9H3H3 251 aaKnown RBP10.17□□□□□ -0.78
IFT43-209ENST00000555305 A0A1B0GUV1 79 aa10.16□□□□□ -0.78
IFT43-209ENST00000555305 DEFB4AO15263 64 aa10.16□□□□□ -0.78
IFT43-209ENST00000555305 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
IFT43-209ENST00000555305 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
IFT43-209ENST00000555305 VWFP04275 2813 aa10.16□□□□□ -0.78
IFT43-209ENST00000555305 A0A0J9YY99 117 aa10.16□□□□□ -0.78
IFT43-209ENST00000555305 MRPL23Q16540 153 aaKnown RBP10.16□□□□□ -0.78
IFT43-209ENST00000555305 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
IFT43-209ENST00000555305 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
IFT43-209ENST00000555305 TMEM238C9JI98 176 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 F5H768 121 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 CCL25O15444 150 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 PCP4P48539 62 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 GAGE6Q13070 117 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 CDKN2A-AS1Q9UH64 79 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 CELA1Q9UNI1 258 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 H3BNG1 76 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 FXYD2P54710 66 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 ICOSQ9Y6W8 199 aa10.14□□□□□ -0.79
IFT43-209ENST00000555305 C9orf118A6NHY6 69 aa10.13□□□□□ -0.79
IFT43-209ENST00000555305 ZFAND6Q6FIF0 208 aa10.13□□□□□ -0.79
IFT43-209ENST00000555305 G3V4G9 280 aa10.12□□□□□ -0.79
IFT43-209ENST00000555305 Q6ZVH6 145 aa10.12□□□□□ -0.79
IFT43-209ENST00000555305 IGHV3-64A0A075B6Q5 118 aa10.11□□□□□ -0.79
IFT43-209ENST00000555305 IGLV5-39A0A0G2JS06 123 aa10.11□□□□□ -0.79
IFT43-209ENST00000555305 SPINK8P0C7L1 97 aa10.11□□□□□ -0.79
IFT43-209ENST00000555305 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
IFT43-209ENST00000555305 TRAV8-3A0A0A6YYJ7 113 aa10.1□□□□□ -0.79
IFT43-209ENST00000555305 A0A1B0GWB2 263 aa10.1□□□□□ -0.79
IFT43-209ENST00000555305 TMEM262E9PQX1 116 aa10.1□□□□□ -0.79
IFT43-209ENST00000555305 VAMP3Q15836 100 aa10.1□□□□□ -0.79
IFT43-209ENST00000555305 NHP2Q9NX24 153 aaKnown RBP10.1□□□□□ -0.79
IFT43-209ENST00000555305 NDUFA1O15239 70 aa10.09□□□□□ -0.79
IFT43-209ENST00000555305 TIMM17BO60830 172 aa10.09□□□□□ -0.79
IFT43-209ENST00000555305 COX6A2Q02221 97 aa10.09□□□□□ -0.79
IFT43-209ENST00000555305 A0A0J9YXY3 114 aa10.09□□□□□ -0.79
IFT43-209ENST00000555305 RPL24P83731 157 aaKnown RBP10.09□□□□□ -0.79
IFT43-209ENST00000555305 UBE2V1Q13404 147 aa10.09□□□□□ -0.79
IFT43-209ENST00000555305 CIRBPQ14011 172 aaKnown RBP10.09□□□□□ -0.79
IFT43-209ENST00000555305 C12orf74Q32Q52 190 aa10.09□□□□□ -0.79
IFT43-209ENST00000555305 IGLV4-60A0A075B6I1 120 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 SMIM1B2RUZ4 78 aa10.08□□□□□ -0.8
IFT43-209ENST00000555305 K7EP13 123 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms