RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 OSTCQ9NRP0 149 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 A0A1B0GUT8 65 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 PRSS47A8MTI9 375 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 UBE2L6O14933 153 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 PMCHP20382 165 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 FUSP35637 526 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATXN3-231ENST00000554994 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
ATXN3-231ENST00000554994 XGP55808 180 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 LINC00315P59091 139 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 GAGE6Q13070 117 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 ELOBQ15370 118 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-231ENST00000554994 UFSP1Q6NVU6 142 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 WDR73Q6P4I2 378 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 RASL11AQ6T310 242 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 FAM231DQ6ZW35 169 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 DAZ4Q86SG3 579 aaKnown RBP3.14□□□□□ -1.91
ATXN3-231ENST00000554994 NFE4Q86UQ8 179 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 GTSF1Q8WW33 167 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 ISOC2Q96AB3 205 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 IMMP2LQ96T52 175 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 UPK3BQ9BT76 320 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 DAZ3Q9NR90 486 aaKnown RBP3.14□□□□□ -1.91
ATXN3-231ENST00000554994 KLK12Q9UKR0 248 aa3.14□□□□□ -1.91
ATXN3-231ENST00000554994 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
ATXN3-231ENST00000554994 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 TRBV10-1A0A0K0K1A3 114 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 M0QY20 66 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 ANGP03950 147 aaKnown RBP3.13□□□□□ -1.91
ATXN3-231ENST00000554994 UBE2D3P61077 147 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 UBE2D2P62837 147 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 MRPL54Q6P161 138 aaKnown RBP3.13□□□□□ -1.91
ATXN3-231ENST00000554994 C10orf126Q8N4M7 172 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 NUP35Q8NFH5 326 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 UBE2WQ96B02 151 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 RPL39LQ96EH5 51 aaKnown RBP3.13□□□□□ -1.91
ATXN3-231ENST00000554994 DNAJC30Q96LL9 226 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 NAT8BQ9UHF3 227 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 V9GYV3 84 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
ATXN3-231ENST00000554994 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 TRBV6-8A0A0A6YYG3 113 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 LECT2O14960 151 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 CRPP02741 224 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 CKS2P33552 79 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 CTRLP40313 264 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 AMTP48728 403 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 PKIAP61925 76 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 COTL1Q14019 142 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 TMEM97Q5BJF2 176 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 AMMECR1LQ6DCA0 310 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 RNASEKQ6P5S7 137 aaKnown RBP3.12□□□□□ -1.91
ATXN3-231ENST00000554994 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
ATXN3-231ENST00000554994 AMN1Q8IY45 258 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 TM2D2Q9BX73 214 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 GFRA4Q9GZZ7 299 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 ST20Q9HBF5 79 aa3.12□□□□□ -1.91
ATXN3-231ENST00000554994 TRAV8-3A0A0A6YYJ7 113 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 PHOX2AO14813 284 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 GAS8-AS1O95177 125 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 NCR2O95944 276 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 RAB4AP20338 218 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 FCER1GP30273 86 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 NDUFA6P56556 154 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 LINC01556Q5JQF7 62 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-231ENST00000554994 NIT1Q86X76 327 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 Q8N976 141 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-231ENST00000554994 RMI2Q96E14 147 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms