RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LINC01560Q8TB33 94 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 CYYR1Q96J86 154 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF714Q96N38 554 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 TIMM17AQ99595 171 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 NABP2Q9BQ15 211 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 NPCDR1Q9BY65 106 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 ROS1P08922 2347 aa3.21□□□□□ -1.9
ATXN3-227ENST00000554491 MED12LQ86YW9 2145 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 A0A096LNJ9 63 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 TRAV13-2A0A0B4J235 113 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 LINC01546A6NGU7 62 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 A8MUN3 132 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 H3BSH0 61 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 LST1O00453 97 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 CXCL6P80162 114 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 FXYD3Q14802 87 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF876PQ49A33 203 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 IMMP1LQ96LU5 166 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 OVOL2Q9BRP0 275 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 LINC00474Q9P2X8 69 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 VWFP04275 2813 aa3.2□□□□□ -1.9
ATXN3-227ENST00000554491 TRAV8-3A0A0A6YYJ7 113 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-227ENST00000554491 HIGD1CA8MV81 97 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 H7C423 109 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 NXPH4O95158 308 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 IGHV3-33P01772 117 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 COX6CP09669 75 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 PLNP26678 52 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 RIGQ13278 110 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 Q1T7F1 81 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 FAM223AQ8IWN6 122 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 SLC25A29Q8N8R3 303 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 FXYD5Q96DB9 178 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 OPRPNQ99935 248 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-227ENST00000554491 MRPL35Q9NZE8 188 aaKnown RBP3.19□□□□□ -1.9
ATXN3-227ENST00000554491 U3KQK5 164 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 RYR2Q92736 4967 aa3.19□□□□□ -1.9
ATXN3-227ENST00000554491 EXPH5Q8NEV8 1989 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 TRAV7A0A075B6U4 112 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 IGKV3D-15A0A087WSY6 115 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 IGHV3-20A0A0C4DH32 117 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 A0A1B0GVY2 172 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 FAM223BA6NKX1 122 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 DEFB108AA8MXU0 73 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 K7EMI3 77 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 M0R381 172 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 ARL14EPLP0DKL9 152 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 INAFM2P0DMQ5 153 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 MP68P56378 58 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 FGF12P61328 243 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 RHOHQ15669 191 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 ESRGQ1W209 222 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 C14orf177Q52M58 125 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 ATP11AUNQ6ZP68 121 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 FAM19A3Q7Z5A8 133 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 Q8IYB0 196 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 FGFBP3Q8TAT2 258 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 SMCR5Q8TEV8 140 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 DIRC1Q969H9 104 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 CCL13Q99616 98 aa3.18□□□□□ -1.9
ATXN3-227ENST00000554491 FREM3P0C091 2139 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 A0A096LNT2 108 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 TRBV10-3A0A0K0K1G6 114 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 PMS2P5A8MQ11 134 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 COX7A2LO14548 114 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 PRSS1P07477 247 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF138P52744 262 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 B3GALT5-AS1P59052 145 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 KRTAP10-3P60369 221 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 PLGLAQ15195 96 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 MRPL51Q4U2R6 128 aaKnown RBP3.17□□□□□ -1.9
ATXN3-227ENST00000554491 SPANXN5Q5MJ07 72 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 S100A7L2Q5SY68 101 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 ATP5EP2Q5VTU8 51 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF818PQ6ZRF7 136 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 C7orf65Q6ZTY9 151 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 NKAPP1Q8N9T2 125 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 DYNLRB2Q8TF09 96 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 RPP21Q9H633 154 aaKnown RBP3.17□□□□□ -1.9
ATXN3-227ENST00000554491 PROK2Q9HC23 129 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 ESM1Q9NQ30 184 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 ZNF355PQ9NSJ1 428 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 UBE2D4Q9Y2X8 147 aa3.17□□□□□ -1.9
ATXN3-227ENST00000554491 TIMM8BQ9Y5J9 83 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-227ENST00000554491 IGKV1D-8A0A087WSZ0 117 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 TRAV12-1A0A0B4J245 112 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 IGKV1-12A0A0C4DH73 117 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 TMEM30CPA0ZSE6 113 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 KLLNB2CW77 178 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 E7EQL1 145 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 H0Y9J4 135 aa3.16□□□□□ -1.9
ATXN3-227ENST00000554491 MRPL33O75394 65 aaKnown RBP3.16□□□□□ -1.9
ATXN3-227ENST00000554491 IGKV1D-12P01611 117 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms