RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 C4orf48Q5BLP8 95 aa5.26□□□□□ -1.57
TDP1-209ENST00000554180 PYY3Q5JQD4 70 aa5.26□□□□□ -1.57
TDP1-209ENST00000554180 TEX43Q6ZNM6 134 aa5.26□□□□□ -1.57
TDP1-209ENST00000554180 AMELXQ99217 191 aa5.26□□□□□ -1.57
TDP1-209ENST00000554180 TGP01266 2768 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 A0A087WX48 190 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 CCL18P55774 89 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 GAGE6Q13070 117 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 ODF1Q14990 250 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 ESRGQ1W209 222 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 Q6ZUT4 128 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 Q8N976 141 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 FAM104AQ969W3 186 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 C2orf88Q9BSF0 95 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 UPK3BQ9BT76 320 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 VCX2Q9H322 139 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 CST9LQ9H4G1 147 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 CDC42SE2Q9NRR3 84 aa5.25□□□□□ -1.57
TDP1-209ENST00000554180 MRPS16Q9Y3D3 137 aaKnown RBP5.25□□□□□ -1.57
TDP1-209ENST00000554180 DNAH7Q8WXX0 4024 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 PRSS29PA6NIE9 313 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 F8VRH5 84 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 H0Y8G0 127 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 SCGB1D1O95968 90 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 PLNP26678 52 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 RBX1P62877 108 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 MPV17L2Q567V2 206 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 ZNF664Q8N3J9 261 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 WWC2-AS2Q96NR7 200 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 OPRPNQ99935 248 aaPredicted RBP5.24□□□□□ -1.57
TDP1-209ENST00000554180 APLNQ9ULZ1 77 aa5.24□□□□□ -1.57
TDP1-209ENST00000554180 CHTOPQ9Y3Y2 248 aaKnown RBP5.24□□□□□ -1.57
TDP1-209ENST00000554180 IGLV4-60A0A075B6I1 120 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 TMEM262E9PQX1 116 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 CCL25O15444 150 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 DPM2O94777 84 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 SEC11AP67812 179 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 LINC01556Q5JQF7 62 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 FAM19A3Q7Z5A8 133 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 MUC7Q8TAX7 377 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 MRPL35Q9NZE8 188 aaKnown RBP5.23□□□□□ -1.57
TDP1-209ENST00000554180 LINC00588Q9Y4M8 146 aa5.23□□□□□ -1.57
TDP1-209ENST00000554180 IGLV4-69A0A075B6H9 119 aa5.22□□□□□ -1.57
TDP1-209ENST00000554180 K7EP13 123 aa5.22□□□□□ -1.57
TDP1-209ENST00000554180 IGKCP01834 107 aa5.22□□□□□ -1.57
TDP1-209ENST00000554180 DNAH10OSP0CZ25 163 aa5.22□□□□□ -1.57
TDP1-209ENST00000554180 IGLC3P0DOY3 106 aa5.22□□□□□ -1.57
TDP1-209ENST00000554180 UBE2D1P51668 147 aa5.22□□□□□ -1.57
TDP1-209ENST00000554180 NFE4Q86UQ8 179 aa5.22□□□□□ -1.57
TDP1-209ENST00000554180 WFDC10BQ8IUB3 73 aa5.22□□□□□ -1.57
TDP1-209ENST00000554180 TINCRA0A1B0GVN0 87 aa5.21□□□□□ -1.58
TDP1-209ENST00000554180 SIVA1O15304 175 aa5.21□□□□□ -1.58
TDP1-209ENST00000554180 ANGP03950 147 aaKnown RBP5.21□□□□□ -1.58
TDP1-209ENST00000554180 S100A12P80511 92 aa5.21□□□□□ -1.58
TDP1-209ENST00000554180 RNASE13Q5GAN3 156 aaKnown RBP5.21□□□□□ -1.58
TDP1-209ENST00000554180 CHAC1Q9BUX1 264 aa5.21□□□□□ -1.58
TDP1-209ENST00000554180 PRR34Q9NV39 138 aa5.21□□□□□ -1.58
TDP1-209ENST00000554180 DYNC2H1Q8NCM8 4307 aaKnown RBP5.21□□□□□ -1.58
TDP1-209ENST00000554180 CSMD3Q7Z407 3707 aa5.21□□□□□ -1.58
TDP1-209ENST00000554180 IGLV5-45A0A087WSX0 123 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 TRAV13-1A0A0B4J241 112 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 C11orf86A6NJI1 115 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 HSBP1L1C9JCN9 74 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 HERVK_113P63121 156 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 REG3AQ06141 175 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 ZC2HC1BQ5TFG8 222 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 LINC00518Q8N0U6 118 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 C10orf126Q8N4M7 172 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 C12orf57Q99622 126 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 PMCHL2Q9BQD1 86 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 VAMP8Q9BV40 100 aa5.2□□□□□ -1.58
TDP1-209ENST00000554180 TENM2Q9NT68 2774 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 TRAV9-2A0A087WT02 112 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 TRAV8-4A0A0B4J246 113 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 A0A0J9YXV3 536 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 LINC00959A0A1B0GUT2 108 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 C3orf84H3BNL1 204 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 CRPP02741 224 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 SS18Q15532 418 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 MIAQ16674 131 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 LINC00242Q5T6M2 205 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 UBE2DNLQ8IWF7 75 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 ATOH7Q8N100 152 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 LINC00269Q8N2A0 174 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 Q8N3U1 123 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 GEMIN7Q9H840 131 aaKnown RBP5.19□□□□□ -1.58
TDP1-209ENST00000554180 KLK12Q9UKR0 248 aa5.19□□□□□ -1.58
TDP1-209ENST00000554180 H3BRM9 83 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 IGHV3-30P01768 117 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 IGHV3-33P01772 117 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 IGHV3-30-3P0DP02 117 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 IGHV3-30-5P0DP03 117 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 ZNF22P17026 224 aaPredicted RBP5.18□□□□□ -1.58
TDP1-209ENST00000554180 HERVK_113P61574 105 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 ZFAND6Q6FIF0 208 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 CDPF1Q6NVV7 123 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 LINC00469Q8N7U9 141 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 Q9H8V8 135 aa5.18□□□□□ -1.58
TDP1-209ENST00000554180 TRAV8-3A0A0A6YYJ7 113 aa5.17□□□□□ -1.58
TDP1-209ENST00000554180 IGHV3OR16-9A0A0B4J2B5 98 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms