RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 TRAV26-1A0A087WT03 109 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 IGKV2-29A2NJV5 120 aaPredicted RBP4.08□□□□□ -1.76
UBR7-203ENST00000553857 RBMY1BA6NDE4 496 aaKnown RBP4.08□□□□□ -1.76
UBR7-203ENST00000553857 RBMY1EA6NEQ0 496 aaKnown RBP4.08□□□□□ -1.76
UBR7-203ENST00000553857 DNAL4O96015 105 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 TRACP01848 142 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 ATP5G1P05496 136 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 RBMY1DP0C7P1 496 aaKnown RBP4.08□□□□□ -1.76
UBR7-203ENST00000553857 RBMY1A1P0DJD3 496 aaKnown RBP4.08□□□□□ -1.76
UBR7-203ENST00000553857 RBMY1CP0DJD4 496 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 INSL3P51460 131 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 ABCA4P78363 2273 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 GAGE5Q13069 117 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 GAGE6Q13070 117 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 FAM19A3Q7Z5A8 133 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 DEFB104AQ8WTQ1 72 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 FAM110AQ9BQ89 295 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 IMUPQ9GZP8 106 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 USP34Q70CQ2 3546 aa4.08□□□□□ -1.76
UBR7-203ENST00000553857 RIF1Q5UIP0 2472 aaKnown RBP4.07□□□□□ -1.76
UBR7-203ENST00000553857 PTPRZ1P23471 2315 aaPredicted RBP4.07□□□□□ -1.76
UBR7-203ENST00000553857 PTPRQQ9UMZ3 2332 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 DSPP15924 2871 aaKnown RBP4.07□□□□□ -1.76
UBR7-203ENST00000553857 TRGV4A0A0C4DH28 118 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 GAGE12JA6NER3 117 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 H0YGX0 51 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 CCL24O00175 119 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 LST1O00453 97 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 COX7A2LO14548 114 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 GAGE7O76087 117 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 CRPP02741 224 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 MT-ATP8P03928 68 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 GAGE12FP0CL80 117 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 GAGE12GP0CL81 117 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 GAGE12IP0CL82 117 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 GAGE4Q13068 117 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 LINC00308Q8TCZ7 52 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 Q9H8V8 135 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 XCL2Q9UBD3 114 aa4.07□□□□□ -1.76
UBR7-203ENST00000553857 TRAV8-3A0A0A6YYJ7 113 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 TRAV13-1A0A0B4J241 112 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 IGLV5-39A0A0G2JS06 123 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 TRBV6-4A0A1B0GX49 114 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 EDN2P20800 178 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 XGP55808 180 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 DEFB121Q5J5C9 76 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 FAM222AQ5U5X8 452 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 C11orf44Q8N8P7 122 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 C15orf53Q8NAA6 179 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 C11orf72Q8NBR9 251 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 SPATA3Q8NHX4 192 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 CDKN2A-AS1Q9UH64 79 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 WDFY3Q8IZQ1 3526 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 ANKRD11Q6UB99 2663 aaPredicted RBP4.06□□□□□ -1.76
UBR7-203ENST00000553857 AGRNO00468 2067 aa4.06□□□□□ -1.76
UBR7-203ENST00000553857 PIEZO2Q9H5I5 2752 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 IGHV3-38A0A0C4DH36 116 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 NDUFV3P56181 108 aaKnown RBP4.05□□□□□ -1.76
UBR7-203ENST00000553857 SS18Q15532 418 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 LINC00242Q5T6M2 205 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 HIST2H2BCQ6DN03 193 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 HIST2H2BDQ6DRA6 164 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 CEMP1Q6PRD7 247 aaPredicted RBP4.05□□□□□ -1.76
UBR7-203ENST00000553857 C10orf99Q6UWK7 81 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 LINC00643Q86TS7 51 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 COX7B2Q8TF08 81 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 LITAFQ99732 161 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 CITED1Q99966 193 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 TTC28Q96AY4 2481 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 SPTA1P02549 2419 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 ZNF292O60281 2723 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 CACNA1BQ00975 2339 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 NBEAQ8NFP9 2946 aa4.05□□□□□ -1.76
UBR7-203ENST00000553857 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 CYSRT1A8MQ03 144 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 IBA57-AS1B1ANH7 110 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 H3BQ85 93 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 BAALC-AS2P0C853 105 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 LINC00158P58513 81 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 DEFB136Q30KP8 78 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 RNASE13Q5GAN3 156 aaKnown RBP4.04□□□□□ -1.76
UBR7-203ENST00000553857 S100A7L2Q5SY68 101 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 ADAMTSL4-AS1Q5T5F5 129 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 DAND5Q8N907 189 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 CHCHD5Q9BSY4 110 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 CDC42SE2Q9NRR3 84 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 MUC4Q99102 2169 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 GVINP1Q7Z2Y8 2422 aa4.04□□□□□ -1.76
UBR7-203ENST00000553857 A0A096LNT2 108 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 SMIM9A6NGZ8 99 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 CXCL5P42830 114 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 NPC2P61916 151 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 RBMY1FQ15415 496 aaKnown RBP4.03□□□□□ -1.76
UBR7-203ENST00000553857 C6orf226Q5I0X4 101 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 LINC01561Q8N1V8 128 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 CLEC2BQ92478 149 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 TMEM126AQ9H061 195 aa4.03□□□□□ -1.76
UBR7-203ENST00000553857 NOP10Q9NPE3 64 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms