RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CSDC2Q9Y534 153 aaKnown RBP9.32□□□□□ -0.92
SHMT2-205ENST00000553474 TIRAPP58753 221 aa9.31□□□□□ -0.92
SHMT2-205ENST00000553474 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
SHMT2-205ENST00000553474 DAZ4Q86SG3 579 aaKnown RBP9.31□□□□□ -0.92
SHMT2-205ENST00000553474 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
SHMT2-205ENST00000553474 ATP6V0E2Q8NHE4 81 aa9.31□□□□□ -0.92
SHMT2-205ENST00000553474 LINC01006Q8NI28 216 aa9.31□□□□□ -0.92
SHMT2-205ENST00000553474 DAZ3Q9NR90 486 aaKnown RBP9.31□□□□□ -0.92
SHMT2-205ENST00000553474 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
SHMT2-205ENST00000553474 TRAV4A0A0B4J268 109 aa9.3□□□□□ -0.92
SHMT2-205ENST00000553474 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
SHMT2-205ENST00000553474 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
SHMT2-205ENST00000553474 RNF183Q96D59 192 aa9.3□□□□□ -0.92
SHMT2-205ENST00000553474 VSIG2Q96IQ7 327 aa9.3□□□□□ -0.92
SHMT2-205ENST00000553474 C1QTNF4Q9BXJ3 329 aa9.3□□□□□ -0.92
SHMT2-205ENST00000553474 ATRQ13535 2644 aa9.3□□□□□ -0.92
SHMT2-205ENST00000553474 A0A0J9YXY3 114 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 PRM2P04554 102 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 WFDC2Q14508 124 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 FAM19A3Q7Z5A8 133 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-205ENST00000553474 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 GEMIN7Q9H840 131 aaKnown RBP9.29□□□□□ -0.92
SHMT2-205ENST00000553474 SPANXCQ9NY87 97 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 A4D1N5 150 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 TIMM17BO60830 172 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 C16orf74Q96GX8 76 aa9.29□□□□□ -0.92
SHMT2-205ENST00000553474 TRGV1A0A0A0MS02 117 aa9.28□□□□□ -0.92
SHMT2-205ENST00000553474 A0A1W2PRX2 142 aa9.28□□□□□ -0.92
SHMT2-205ENST00000553474 K7EQD1 137 aa9.28□□□□□ -0.92
SHMT2-205ENST00000553474 IGLV1-51P01701 117 aa9.28□□□□□ -0.92
SHMT2-205ENST00000553474 DGAT2L7PQ6IED9 249 aa9.28□□□□□ -0.92
SHMT2-205ENST00000553474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.92
SHMT2-205ENST00000553474 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.92
SHMT2-205ENST00000553474 NDUFA7O95182 113 aa9.27□□□□□ -0.92
SHMT2-205ENST00000553474 HERVK_113P63121 156 aa9.27□□□□□ -0.92
SHMT2-205ENST00000553474 ETDBQ3ZM63 59 aa9.27□□□□□ -0.92
SHMT2-205ENST00000553474 ZFAND6Q6FIF0 208 aa9.27□□□□□ -0.92
SHMT2-205ENST00000553474 CEMP1Q6PRD7 247 aaPredicted RBP9.27□□□□□ -0.92
SHMT2-205ENST00000553474 Q6ZUT4 128 aa9.27□□□□□ -0.92
SHMT2-205ENST00000553474 NDUFA12Q9UI09 145 aa9.27□□□□□ -0.92
SHMT2-205ENST00000553474 M0QXV9 152 aa9.27□□□□□ -0.93
SHMT2-205ENST00000553474 Q9UF83 564 aa9.27□□□□□ -0.93
SHMT2-205ENST00000553474 IGHV3-64A0A075B6Q5 118 aa9.26□□□□□ -0.93
SHMT2-205ENST00000553474 IGHV3-33P01772 117 aa9.26□□□□□ -0.93
SHMT2-205ENST00000553474 KRTAP24-1Q3LI83 254 aa9.26□□□□□ -0.93
SHMT2-205ENST00000553474 MUSTN1Q8IVN3 82 aa9.26□□□□□ -0.93
SHMT2-205ENST00000553474 LITAFQ99732 161 aa9.26□□□□□ -0.93
SHMT2-205ENST00000553474 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
SHMT2-205ENST00000553474 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
SHMT2-205ENST00000553474 WNK1Q9H4A3 2382 aa9.26□□□□□ -0.93
SHMT2-205ENST00000553474 IGHV3OR16-12A0A075B7B8 117 aa9.25□□□□□ -0.93
SHMT2-205ENST00000553474 H7C423 109 aa9.25□□□□□ -0.93
SHMT2-205ENST00000553474 IFITM1P13164 125 aa9.25□□□□□ -0.93
SHMT2-205ENST00000553474 PSMB2P49721 201 aa9.25□□□□□ -0.93
SHMT2-205ENST00000553474 MTURNQ8N3F0 131 aa9.25□□□□□ -0.93
SHMT2-205ENST00000553474 C11orf44Q8N8P7 122 aa9.25□□□□□ -0.93
SHMT2-205ENST00000553474 TRAV8-3A0A0A6YYJ7 113 aa9.24□□□□□ -0.93
SHMT2-205ENST00000553474 IGHV3-38A0A0C4DH36 116 aa9.24□□□□□ -0.93
SHMT2-205ENST00000553474 MIAQ16674 131 aa9.24□□□□□ -0.93
SHMT2-205ENST00000553474 SBSPONQ8IVN8 264 aa9.24□□□□□ -0.93
SHMT2-205ENST00000553474 NDUFA1O15239 70 aa9.24□□□□□ -0.93
SHMT2-205ENST00000553474 Q6ZTI0 123 aa9.24□□□□□ -0.93
SHMT2-205ENST00000553474 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
SHMT2-205ENST00000553474 OVOL2Q9BRP0 275 aa9.24□□□□□ -0.93
SHMT2-205ENST00000553474 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
SHMT2-205ENST00000553474 TCL1BO95988 128 aa9.23□□□□□ -0.93
SHMT2-205ENST00000553474 SCGB1C2P0DMR2 95 aa9.23□□□□□ -0.93
SHMT2-205ENST00000553474 CIRBPQ14011 172 aaKnown RBP9.23□□□□□ -0.93
SHMT2-205ENST00000553474 SH2D6Q7Z4S9 175 aa9.23□□□□□ -0.93
SHMT2-205ENST00000553474 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-205ENST00000553474 RNASE13Q5GAN3 156 aaKnown RBP9.22□□□□□ -0.93
SHMT2-205ENST00000553474 HIST2H2BDQ6DRA6 164 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 SPATA25Q9BR10 227 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 C19orf73Q9NVV2 129 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 TRAV26-1A0A087WT03 109 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 SPINK8P0C7L1 97 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 FOXI1Q12951 378 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 TEN1Q86WV5 123 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 CITED1Q99966 193 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 PPDPFQ9H3Y8 114 aa9.22□□□□□ -0.93
SHMT2-205ENST00000553474 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-205ENST00000553474 LINC00242Q5T6M2 205 aa9.21□□□□□ -0.94
SHMT2-205ENST00000553474 CSNK1G2-AS1Q8NCQ2 148 aa9.21□□□□□ -0.94
SHMT2-205ENST00000553474 LINC01600Q96MT4 127 aa9.21□□□□□ -0.94
SHMT2-205ENST00000553474 NOP10Q9NPE3 64 aaKnown RBP9.21□□□□□ -0.94
SHMT2-205ENST00000553474 PLAC8L1A1L4L8 177 aa9.2□□□□□ -0.94
SHMT2-205ENST00000553474 GAGE12HA6NDE8 117 aa9.2□□□□□ -0.94
SHMT2-205ENST00000553474 ADARB2-AS1A8MUL3 147 aa9.2□□□□□ -0.94
SHMT2-205ENST00000553474 PRSS2P07478 247 aa9.2□□□□□ -0.94
SHMT2-205ENST00000553474 TMEM101Q96IK0 257 aa9.2□□□□□ -0.94
SHMT2-205ENST00000553474 CDC42SE2Q9NRR3 84 aa9.2□□□□□ -0.94
SHMT2-205ENST00000553474 TENM1Q9UKZ4 2725 aa9.2□□□□□ -0.94
SHMT2-205ENST00000553474 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-205ENST00000553474 ATXN8Q156A1 80 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms