RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 TMEM262E9PQX1 116 aa7.59□□□□□ -1.19
LINC00661-206ENST00000552608 PMCHL2Q9BQD1 86 aa7.59□□□□□ -1.19
LINC00661-206ENST00000552608 CST9LQ9H4G1 147 aa7.59□□□□□ -1.19
LINC00661-206ENST00000552608 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
LINC00661-206ENST00000552608 TRAV9-2A0A087WT02 112 aa7.58□□□□□ -1.2
LINC00661-206ENST00000552608 LYPD5Q6UWN5 251 aa7.58□□□□□ -1.2
LINC00661-206ENST00000552608 ATOH7Q8N100 152 aa7.58□□□□□ -1.2
LINC00661-206ENST00000552608 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
LINC00661-206ENST00000552608 AMELXQ99217 191 aa7.58□□□□□ -1.2
LINC00661-206ENST00000552608 MRPL35Q9NZE8 188 aaKnown RBP7.58□□□□□ -1.2
LINC00661-206ENST00000552608 A0A1B0GUV1 79 aa7.57□□□□□ -1.2
LINC00661-206ENST00000552608 SEC11AP67812 179 aa7.57□□□□□ -1.2
LINC00661-206ENST00000552608 CEMP1Q6PRD7 247 aaPredicted RBP7.57□□□□□ -1.2
LINC00661-206ENST00000552608 Q6ZUT4 128 aa7.57□□□□□ -1.2
LINC00661-206ENST00000552608 OPRPNQ99935 248 aaPredicted RBP7.57□□□□□ -1.2
LINC00661-206ENST00000552608 CDC42SE2Q9NRR3 84 aa7.57□□□□□ -1.2
LINC00661-206ENST00000552608 TSTD3H0UI37 97 aa7.56□□□□□ -1.2
LINC00661-206ENST00000552608 SPATA45Q537H7 98 aa7.56□□□□□ -1.2
LINC00661-206ENST00000552608 CDPF1Q6NVV7 123 aa7.56□□□□□ -1.2
LINC00661-206ENST00000552608 PAM16Q9Y3D7 125 aa7.56□□□□□ -1.2
LINC00661-206ENST00000552608 NUPR2A6NF83 97 aa7.55□□□□□ -1.2
LINC00661-206ENST00000552608 IGLL5B9A064 214 aa7.55□□□□□ -1.2
LINC00661-206ENST00000552608 IGLC3P0DOY3 106 aa7.55□□□□□ -1.2
LINC00661-206ENST00000552608 HERVK_113P61574 105 aa7.55□□□□□ -1.2
LINC00661-206ENST00000552608 CHAC1Q9BUX1 264 aa7.55□□□□□ -1.2
LINC00661-206ENST00000552608 KLK5Q9Y337 293 aaPredicted RBP7.55□□□□□ -1.2
LINC00661-206ENST00000552608 HUWE1Q7Z6Z7 4374 aaKnown RBP7.55□□□□□ -1.2
LINC00661-206ENST00000552608 TINCRA0A1B0GVN0 87 aa7.54□□□□□ -1.2
LINC00661-206ENST00000552608 CCL18P55774 89 aa7.54□□□□□ -1.2
LINC00661-206ENST00000552608 RBX1P62877 108 aa7.54□□□□□ -1.2
LINC00661-206ENST00000552608 RNASE13Q5GAN3 156 aaKnown RBP7.54□□□□□ -1.2
LINC00661-206ENST00000552608 NFE4Q86UQ8 179 aa7.54□□□□□ -1.2
LINC00661-206ENST00000552608 GEMIN7Q9H840 131 aaKnown RBP7.54□□□□□ -1.2
LINC00661-206ENST00000552608 IGLV4-69A0A075B6H9 119 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 hDV102S1A0JD36 115 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 CCL25O15444 150 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 UBE2D1P51668 147 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 TCTAP57738 103 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 HERVK_113P63121 156 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 MPV17L2Q567V2 206 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 ZC2HC1BQ5TFG8 222 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 FAM19A3Q7Z5A8 133 aa7.53□□□□□ -1.2
LINC00661-206ENST00000552608 IGLV4-60A0A075B6I1 120 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 A0A0J9YXV3 536 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 C11orf86A6NJI1 115 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 H3BRM9 83 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 SS18Q15532 418 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 ESRGQ1W209 222 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 FAM104AQ969W3 186 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 NBEAL1Q6ZS30 2694 aa7.52□□□□□ -1.21
LINC00661-206ENST00000552608 DNAH9Q9NYC9 4486 aa7.51□□□□□ -1.21
LINC00661-206ENST00000552608 NBEAL2Q6ZNJ1 2754 aa7.51□□□□□ -1.21
LINC00661-206ENST00000552608 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
LINC00661-206ENST00000552608 ANGP03950 147 aaKnown RBP7.51□□□□□ -1.21
LINC00661-206ENST00000552608 MAJINQ3KP22 176 aa7.51□□□□□ -1.21
LINC00661-206ENST00000552608 IGKV3OR2-268A0A0C4DH90 116 aa7.5□□□□□ -1.21
LINC00661-206ENST00000552608 CRPP02741 224 aa7.5□□□□□ -1.21
LINC00661-206ENST00000552608 STPG4Q8N801 248 aa7.5□□□□□ -1.21
LINC00661-206ENST00000552608 PRO1933Q9H354 126 aa7.5□□□□□ -1.21
LINC00661-206ENST00000552608 MRPS16Q9Y3D3 137 aaKnown RBP7.5□□□□□ -1.21
LINC00661-206ENST00000552608 DNHD1Q96M86 4753 aa7.49□□□□□ -1.21
LINC00661-206ENST00000552608 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
LINC00661-206ENST00000552608 NMUP48645 174 aa7.49□□□□□ -1.21
LINC00661-206ENST00000552608 REG3AQ06141 175 aa7.49□□□□□ -1.21
LINC00661-206ENST00000552608 ANKRD39Q53RE8 183 aa7.49□□□□□ -1.21
LINC00661-206ENST00000552608 LINC00242Q5T6M2 205 aa7.49□□□□□ -1.21
LINC00661-206ENST00000552608 LINC00469Q8N7U9 141 aa7.49□□□□□ -1.21
LINC00661-206ENST00000552608 UQCR10Q9UDW1 63 aa7.49□□□□□ -1.21
LINC00661-206ENST00000552608 IGLV5-45A0A087WSX0 123 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 LINC00959A0A1B0GUT2 108 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 E9PLD3 99 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 SIVA1O15304 175 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 IGHV3-30P01768 117 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 IGHV3-33P01772 117 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 IGHV3-30-3P0DP02 117 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 IGHV3-30-5P0DP03 117 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 SLC25A34Q6PIV7 304 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 WFDC10BQ8IUB3 73 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 UBE2DNLQ8IWF7 75 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 LINC00269Q8N2A0 174 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 APLNQ9ULZ1 77 aa7.48□□□□□ -1.21
LINC00661-206ENST00000552608 TMEM223A0PJW6 202 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 COX8AP10176 69 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 LINC01556Q5JQF7 62 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 PLEKHB2Q96CS7 222 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 MIEN1Q9BRT3 115 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 UPK3BQ9BT76 320 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 KLK12Q9UKR0 248 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 LINC00588Q9Y4M8 146 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
LINC00661-206ENST00000552608 TRAV8-4A0A0B4J246 113 aa7.46□□□□□ -1.22
LINC00661-206ENST00000552608 PCP4L1A6NKN8 68 aa7.46□□□□□ -1.22
LINC00661-206ENST00000552608 LEPROTO15243 131 aa7.46□□□□□ -1.22
LINC00661-206ENST00000552608 DNAH10OSP0CZ25 163 aa7.46□□□□□ -1.22
LINC00661-206ENST00000552608 MIAQ16674 131 aa7.46□□□□□ -1.22
LINC00661-206ENST00000552608 C14orf144Q96I85 54 aa7.46□□□□□ -1.22
LINC00661-206ENST00000552608 IGHV1-58A0A0C4DH39 117 aa7.45□□□□□ -1.22
LINC00661-206ENST00000552608 DLEU1O43261 78 aa7.45□□□□□ -1.22
LINC00661-206ENST00000552608 LGALS3P17931 250 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms